Literature DB >> 14579355

The tissue factor/factor VIIa/factor Xa complex: a model built by docking and site-directed mutagenesis.

Brian V Norledge1, Ramona J Petrovan, Wolfram Ruf, Arthur J Olson.   

Abstract

Factor X is activated to factor Xa (fXa) in the extrinsic coagulation pathway by the tissue factor (TF)/factor VIIa (fVIIa) complex. Upon activation, the fXa molecule remains associated with the TF/fVIIa complex, and this ternary complex is known to activate protease-activated receptors (PARs) 1 and 2. Activation of fVII in the TF complex by fXa is also seen at physiologic concentrations. The ternary complexes TF/fVII/fXa, TF/fVIIa/fX, and TF/fVIIa/fXa are therefore all physiologically relevant and of interest as targets for inhibition of both coagulation and cell-signaling pathways that are important in cardiovascular disease and inflammation. We therefore present a model of the TF/fVIIa/fXa complex, built with the use of the available structures of the TF/fVIIa complex and fXa by protein-protein docking calculations with the program Surfdock. The fXa model has an extended conformation, similar to that of fVIIa in the TF/fVIIa complex, with extensive interactions with TF and the protease domain of fVIIa. All four domains of fXa are involved in the interaction. The gamma-carboxyglutamate (Gla) and epithelial growth factor (EGF1 and EGF2) domains of fVIIa are not significantly involved in the interaction. Docking of the Gla domain of fXa to TF/fVIIa has been reported previously. The docking results identify potential interface residues, allowing rational selection of target residues for site-directed mutagenesis. This combination of docking and mutagenesis confirms that residues Glu51 and Asn57 in the EGF1 domain, Asp92 and Asp95 in the EGF2 domain, and Asp 185a, Lys 186, and Lys134 in the protease domain of factor Xa are involved in the interaction with TF/fVIIa. Other fX protease domain residues predicted to be involved in the interaction come from the 160s loop and the N-terminus of the fX protease domain, which is oriented in such a way that activation of both fVII by fXa, and the reciprocal fX activation by fVIIa, is possible. Copyright 2003 Wiley-Liss, Inc.

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Year:  2003        PMID: 14579355     DOI: 10.1002/prot.10445

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  24 in total

Review 1.  Role of thiol pathways in TF procoagulant regulation.

Authors:  Wolfram Ruf
Journal:  Thromb Res       Date:  2012-03-07       Impact factor: 3.944

2.  Engineering of substrate selectivity for tissue factor.factor VIIa complex signaling through protease-activated receptor 2.

Authors:  Katrine S Larsen; Henrik Ostergaard; Ole H Olsen; Jais R Bjelke; Wolfram Ruf; Lars C Petersen
Journal:  J Biol Chem       Date:  2010-04-13       Impact factor: 5.157

3.  Dynamical view of membrane binding and complex formation of human factor VIIa and tissue factor.

Authors:  Y Z Ohkubo; J H Morrissey; E Tajkhorshid
Journal:  J Thromb Haemost       Date:  2010-02-24       Impact factor: 5.824

4.  Beating tissue factor at its own game: Design and properties of a soluble tissue factor-independent coagulation factor VIIa.

Authors:  Anders B Sorensen; Inga Tuneew; L Anders Svensson; Egon Persson; Henrik Østergaard; Michael Toft Overgaard; Ole H Olsen; Prafull S Gandhi
Journal:  J Biol Chem       Date:  2019-12-04       Impact factor: 5.157

5.  Disulfide isomerization switches tissue factor from coagulation to cell signaling.

Authors:  Jasimuddin Ahamed; Henri H Versteeg; Marjolein Kerver; Vivien M Chen; Barbara M Mueller; Philip J Hogg; Wolfram Ruf
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-07       Impact factor: 11.205

6.  Selective factor VIII activation by the tissue factor-factor VIIa-factor Xa complex.

Authors:  Yuichi Kamikubo; G Loredana Mendolicchio; Antonella Zampolli; Patrizia Marchese; Andrea S Rothmeier; Jennifer Nagrampa Orje; Andrew J Gale; Sriram Krishnaswamy; András Gruber; Henrik Østergaard; Lars C Petersen; Wolfram Ruf; Zaverio M Ruggeri
Journal:  Blood       Date:  2017-07-20       Impact factor: 22.113

7.  Molecular dynamic simulations of the binary complex of human tissue factor (TF(1-242) ) and factor VIIa (TF(1-242) /FVIIa) on a 4:1 POPC/POPS lipid bilayer.

Authors:  C J Lee; S Wu; L J Bartolotti; L G Pedersen
Journal:  J Thromb Haemost       Date:  2012-11       Impact factor: 5.824

8.  Shape complementarity of protein-protein complexes at multiple resolutions.

Authors:  Qing Zhang; Michel Sanner; Arthur J Olson
Journal:  Proteins       Date:  2009-05-01

9.  Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.

Authors:  Mehmet Sen; Mark Herzik; John W Craft; Andrea L Creath; Sameer Agrawal; Wolfram Ruf; Glen B Legge
Journal:  Open Spectrosc J       Date:  2009-01-01

10.  Identification of the integrin-binding site on coagulation factor VIIa required for proangiogenic PAR2 signaling.

Authors:  Andrea S Rothmeier; Enbo Liu; Sagarika Chakrabarty; Jennifer Disse; Barbara M Mueller; Henrik Østergaard; Wolfram Ruf
Journal:  Blood       Date:  2017-12-15       Impact factor: 22.113

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