Literature DB >> 22965354

Revising the human mutation rate: implications for understanding human evolution.

Aylwyn Scally1, Richard Durbin.   

Abstract

It is now possible to make direct measurements of the mutation rate in modern humans using next-generation sequencing. These measurements reveal a value that is approximately half of that previously derived from fossil calibration, and this has implications for our understanding of demographic events in human evolution and other aspects of population genetics. Here, we discuss the implications of a lower-than-expected mutation rate in relation to the timescale of human evolution.

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Year:  2012        PMID: 22965354     DOI: 10.1038/nrg3295

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  62 in total

1.  Human evolution. Did modern humans travel out of Africa via Arabia?

Authors:  Andrew Lawler
Journal:  Science       Date:  2011-01-28       Impact factor: 47.728

2.  A "Copernican" reassessment of the human mitochondrial DNA tree from its root.

Authors:  Doron M Behar; Mannis van Oven; Saharon Rosset; Mait Metspalu; Eva-Liis Loogväli; Nuno M Silva; Toomas Kivisild; Antonio Torroni; Richard Villems
Journal:  Am J Hum Genet       Date:  2012-04-06       Impact factor: 11.025

3.  From the Bay of Naples to the River Don: the Campanian Ignimbrite eruption and the Middle to Upper Paleolithic transition in Eastern Europe.

Authors:  John F Hoffecker; Vance T Holliday; M V Anikovich; A A Sinitsyn; V V Popov; S N Lisitsyn; G M Levkovskaya; G A Pospelova; Steven L Forman; Biagio Giaccio
Journal:  J Hum Evol       Date:  2008-10-19       Impact factor: 3.895

4.  Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania.

Authors:  David Reich; Nick Patterson; Martin Kircher; Frederick Delfin; Madhusudan R Nandineni; Irina Pugach; Albert Min-Shan Ko; Ying-Chin Ko; Timothy A Jinam; Maude E Phipps; Naruya Saitou; Andreas Wollstein; Manfred Kayser; Svante Pääbo; Mark Stoneking
Journal:  Am J Hum Genet       Date:  2011-09-22       Impact factor: 11.025

5.  Variation in genome-wide mutation rates within and between human families.

Authors:  Donald F Conrad; Jonathan E M Keebler; Mark A DePristo; Sarah J Lindsay; Yujun Zhang; Ferran Casals; Youssef Idaghdour; Chris L Hartl; Carlos Torroja; Kiran V Garimella; Martine Zilversmit; Reed Cartwright; Guy A Rouleau; Mark Daly; Eric A Stone; Matthew E Hurles; Philip Awadalla
Journal:  Nat Genet       Date:  2011-06-12       Impact factor: 38.330

6.  De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Authors:  Stephan J Sanders; Michael T Murtha; Abha R Gupta; John D Murdoch; Melanie J Raubeson; A Jeremy Willsey; A Gulhan Ercan-Sencicek; Nicholas M DiLullo; Neelroop N Parikshak; Jason L Stein; Michael F Walker; Gordon T Ober; Nicole A Teran; Youeun Song; Paul El-Fishawy; Ryan C Murtha; Murim Choi; John D Overton; Robert D Bjornson; Nicholas J Carriero; Kyle A Meyer; Kaya Bilguvar; Shrikant M Mane; Nenad Sestan; Richard P Lifton; Murat Günel; Kathryn Roeder; Daniel H Geschwind; Bernie Devlin; Matthew W State
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

7.  Using genetic evidence to evaluate four palaeoanthropological hypotheses for the timing of Neanderthal and modern human origins.

Authors:  Phillip Endicott; Simon Y W Ho; Chris Stringer
Journal:  J Hum Evol       Date:  2010-05-26       Impact factor: 3.895

8.  The dawn of human matrilineal diversity.

Authors:  Doron M Behar; Richard Villems; Himla Soodyall; Jason Blue-Smith; Luisa Pereira; Ene Metspalu; Rosaria Scozzari; Heeran Makkan; Shay Tzur; David Comas; Jaume Bertranpetit; Lluis Quintana-Murci; Chris Tyler-Smith; R Spencer Wells; Saharon Rosset
Journal:  Am J Hum Genet       Date:  2008-04-24       Impact factor: 11.025

9.  Is Homo heidelbergensis a distinct species? New insight on the Mauer mandible.

Authors:  Aurélien Mounier; François Marchal; Silvana Condemi
Journal:  J Hum Evol       Date:  2009-02-27       Impact factor: 3.895

10.  Inference of human population history from individual whole-genome sequences.

Authors:  Heng Li; Richard Durbin
Journal:  Nature       Date:  2011-07-13       Impact factor: 49.962

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  187 in total

1.  Homo neanderthalensis and the evolutionary origins of ritual in Homo sapiens.

Authors:  Mark Nielsen; Michelle C Langley; Ceri Shipton; Rohan Kapitány
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-29       Impact factor: 6.237

2.  Discovery of the Fuyan teeth: challenging or complementing the out-of-Africa scenario?

Authors:  Yu-Chun Li; Jiao-Yang Tian; Qing-Peng Kong
Journal:  Dongwuxue Yanjiu       Date:  2015-11-18

3.  Genomic analysis of snub-nosed monkeys (Rhinopithecus) identifies genes and processes related to high-altitude adaptation.

Authors:  Li Yu; Guo-Dong Wang; Jue Ruan; Yong-Bin Chen; Cui-Ping Yang; Xue Cao; Hong Wu; Yan-Hu Liu; Zheng-Lin Du; Xiao-Ping Wang; Jing Yang; Shao-Chen Cheng; Li Zhong; Lu Wang; Xuan Wang; Jing-Yang Hu; Lu Fang; Bing Bai; Kai-Le Wang; Na Yuan; Shi-Fang Wu; Bao-Guo Li; Jin-Guo Zhang; Ye-Qin Yang; Cheng-Lin Zhang; Yong-Cheng Long; Hai-Shu Li; Jing-Yuan Yang; David M Irwin; Oliver A Ryder; Ying Li; Chung-I Wu; Ya-Ping Zhang
Journal:  Nat Genet       Date:  2016-07-11       Impact factor: 38.330

4.  Primate phylogenetic relationships and divergence dates inferred from complete mitochondrial genomes.

Authors:  Luca Pozzi; Jason A Hodgson; Andrew S Burrell; Kirstin N Sterner; Ryan L Raaum; Todd R Disotell
Journal:  Mol Phylogenet Evol       Date:  2014-02-28       Impact factor: 4.286

Review 5.  Recent advances in the study of fine-scale population structure in humans.

Authors:  John Novembre; Benjamin M Peter
Journal:  Curr Opin Genet Dev       Date:  2016-09-20       Impact factor: 5.578

6.  Analysis of Human Sequence Data Reveals Two Pulses of Archaic Denisovan Admixture.

Authors:  Sharon R Browning; Brian L Browning; Ying Zhou; Serena Tucci; Joshua M Akey
Journal:  Cell       Date:  2018-03-15       Impact factor: 41.582

Review 7.  Almost 20 years of Neanderthal palaeogenetics: adaptation, admixture, diversity, demography and extinction.

Authors:  Federico Sánchez-Quinto; Carles Lalueza-Fox
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

8.  An African American paternal lineage adds an extremely ancient root to the human Y chromosome phylogenetic tree.

Authors:  Fernando L Mendez; Thomas Krahn; Bonnie Schrack; Astrid-Maria Krahn; Krishna R Veeramah; August E Woerner; Forka Leypey Mathew Fomine; Neil Bradman; Mark G Thomas; Tatiana M Karafet; Michael F Hammer
Journal:  Am J Hum Genet       Date:  2013-02-28       Impact factor: 11.025

Review 9.  Inferring population size changes with sequence and SNP data: lessons from human bottlenecks.

Authors:  L M Gattepaille; M Jakobsson; M G B Blum
Journal:  Heredity (Edinb)       Date:  2013-02-20       Impact factor: 3.821

10.  Ancestral Origins and Genetic History of Tibetan Highlanders.

Authors:  Dongsheng Lu; Haiyi Lou; Kai Yuan; Xiaoji Wang; Yuchen Wang; Chao Zhang; Yan Lu; Xiong Yang; Lian Deng; Ying Zhou; Qidi Feng; Ya Hu; Qiliang Ding; Yajun Yang; Shilin Li; Li Jin; Yaqun Guan; Bing Su; Longli Kang; Shuhua Xu
Journal:  Am J Hum Genet       Date:  2016-08-25       Impact factor: 11.025

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