Literature DB >> 22961850

Analysis of ThiC variants in the context of the metabolic network of Salmonella enterica.

Lauren D Palmer1, Michael J Dougherty, Diana M Downs.   

Abstract

In bacteria, the 4-amino-hydroxymethyl-2-methylpyrimidine (HMP) moiety of thiamine is synthesized from 5-aminoimidazole ribotide (AIR), a branch point metabolite of purine and thiamine biosynthesis. ThiC is a member of the radical S-adenosylmethionine (AdoMet) superfamily and catalyzes the complex chemical rearrangement of AIR to HMP-P. As reconstituted in vitro, the ThiC reaction requires AdoMet, AIR, and reductant. This study analyzed variants of ThiC in vivo and in vitro to probe the metabolic network surrounding AIR in Salmonella enterica. Several variants of ThiC that required metabolic perturbations to function in vivo were biochemically characterized in vitro. Results presented herein indicate that the subtleties of the metabolic network have not been captured in the current reconstitution of the ThiC reaction.

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Year:  2012        PMID: 22961850      PMCID: PMC3486400          DOI: 10.1128/JB.01361-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  39 in total

1.  Ultraviolet absorption spectra of adenosine-5'-triphosphate and related 5'-ribonucleotides.

Authors:  R M BOCK; N S LING; S A MORELL; S H LIPTON
Journal:  Arch Biochem Biophys       Date:  1956-06       Impact factor: 4.013

2.  Mutations in the tryptophan operon allow PurF-independent thiamine synthesis by altering flux in vivo.

Authors:  Itzel Ramos; E I Vivas; D M Downs
Journal:  J Bacteriol       Date:  2007-06-08       Impact factor: 3.490

3.  Complex metabolic phenotypes caused by a mutation in yjgF, encoding a member of the highly conserved YER057c/YjgF family of proteins.

Authors:  J L Enos-Berlage; M J Langendorf; D M Downs
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

4.  Genetic analysis of metabolic crosstalk and its impact on thiamine synthesis in Salmonella typhimurium.

Authors:  L Petersen; J Enos-Berlage; D M Downs
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

5.  Characterization of thiL, encoding thiamin-monophosphate kinase, in Salmonella typhimurium.

Authors:  E Webb; D Downs
Journal:  J Biol Chem       Date:  1997-06-20       Impact factor: 5.157

6.  A connection between iron-sulfur cluster metabolism and the biosynthesis of 4-amino-5-hydroxymethyl-2-methylpyrimidine pyrophosphate in Salmonella enterica.

Authors:  Michael J Dougherty; Diana M Downs
Journal:  Microbiology       Date:  2006-08       Impact factor: 2.777

7.  Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily.

Authors:  Abhishek Chatterjee; Yue Li; Yang Zhang; Tyler L Grove; Michael Lee; Carsten Krebs; Squire J Booker; Tadhg P Begley; Steven E Ealick
Journal:  Nat Chem Biol       Date:  2008-10-26       Impact factor: 15.040

8.  ThiC is an [Fe-S] cluster protein that requires AdoMet to generate the 4-amino-5-hydroxymethyl-2-methylpyrimidine moiety in thiamin synthesis.

Authors:  N Cecilia Martinez-Gomez; Diana M Downs
Journal:  Biochemistry       Date:  2008-08-08       Impact factor: 3.162

Review 9.  Transition-state theoretical interpretation of the catalytic power of pyruvate decarboxylases: the roles of static and dynamical considerations.

Authors:  J Hong; S Sun; T Derrick; C Larive; K B Schowen; R L Schowen
Journal:  Biochim Biophys Acta       Date:  1998-06-29

10.  Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC.

Authors:  Maja Raschke; Lukas Bürkle; Nadine Müller; Adriano Nunes-Nesi; Alisdair R Fernie; Duilio Arigoni; Nikolaus Amrhein; Teresa B Fitzpatrick
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-28       Impact factor: 11.205

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  7 in total

1.  The thiamine biosynthetic enzyme ThiC catalyzes multiple turnovers and is inhibited by S-adenosylmethionine (AdoMet) metabolites.

Authors:  Lauren D Palmer; Diana M Downs
Journal:  J Biol Chem       Date:  2013-09-06       Impact factor: 5.157

Review 2.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

3.  Aminoimidazole Carboxamide Ribotide Exerts Opposing Effects on Thiamine Synthesis in Salmonella enterica.

Authors:  Jannell V Bazurto; Nicholas J Heitman; Diana M Downs
Journal:  J Bacteriol       Date:  2015-06-22       Impact factor: 3.490

4.  Genetic Analysis Using Vitamin B6 Antagonist 4-Deoxypyridoxine Uncovers a Connection between Pyridoxal 5'-Phosphate and Coenzyme A Metabolism in Salmonella enterica.

Authors:  Huong N Vu; Diana M Downs
Journal:  J Bacteriol       Date:  2022-01-31       Impact factor: 3.476

5.  2-Aminoacrylate Stress Induces a Context-Dependent Glycine Requirement in ridA Strains of Salmonella enterica.

Authors:  Dustin C Ernst; Diana M Downs
Journal:  J Bacteriol       Date:  2015-11-16       Impact factor: 3.490

6.  Thiamine Acquisition Strategies Impact Metabolism and Competition in the Gut Microbe Bacteroides thetaiotaomicron.

Authors:  Zachary A Costliow; Patrick H Degnan
Journal:  mSystems       Date:  2017-09-26       Impact factor: 6.496

7.  Perturbation of the metabolic network in Salmonella enterica reveals cross-talk between coenzyme A and thiamine pathways.

Authors:  Dustin C Ernst; Andrew J Borchert; Diana M Downs
Journal:  PLoS One       Date:  2018-05-23       Impact factor: 3.240

  7 in total

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