Literature DB >> 18048325

Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC.

Maja Raschke1, Lukas Bürkle, Nadine Müller, Adriano Nunes-Nesi, Alisdair R Fernie, Duilio Arigoni, Nikolaus Amrhein, Teresa B Fitzpatrick.   

Abstract

Vitamin B1 (thiamin) is an essential compound in all organisms acting as a cofactor in key metabolic reactions and has furthermore been implicated in responses to DNA damage and pathogen attack in plants. Despite the fact that it was discovered almost a century ago and deficiency is a widespread health problem, much remains to be deciphered about its biosynthesis. The vitamin is composed of a thiazole and pyrimidine heterocycle, which can be synthesized by prokaryotes, fungi, and plants. Plants are the major source of the vitamin in the human diet, yet little is known about the biosynthesis of the compound therein. In particular, it has never been verified whether the pyrimidine heterocycle is derived from purine biosynthesis through the action of the THIC protein as in bacteria, rather than vitamin B6 and histidine as demonstrated for fungi. Here, we identify a homolog of THIC in Arabidopsis and demonstrate its essentiality not only for vitamin B1 biosynthesis, but also plant viability. This step takes place in the chloroplast and appears to be regulated at several levels, including through the presence of a riboswitch in the 3'-untranslated region of THIC. Strong evidence is provided for the involvement of an iron-sulfur cluster in the remarkable chemical rearrangement reaction catalyzed by the THIC protein for which there is no chemical precedent. The results suggest that vitamin B1 biosynthesis in plants is in fact more similar to prokaryotic counterparts and that the THIC protein is likely to be the key regulatory protein in the pathway.

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Year:  2007        PMID: 18048325      PMCID: PMC2148341          DOI: 10.1073/pnas.0709597104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

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2.  A high-throughput Arabidopsis reverse genetics system.

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Journal:  Plant Cell       Date:  2002-12       Impact factor: 11.277

3.  Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.

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Journal:  Cell       Date:  2002-11-27       Impact factor: 41.582

4.  Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression.

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Journal:  Nature       Date:  2002-10-16       Impact factor: 49.962

5.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.

Authors:  O Emanuelsson; H Nielsen; S Brunak; G von Heijne
Journal:  J Mol Biol       Date:  2000-07-21       Impact factor: 5.469

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-05       Impact factor: 11.205

Review 7.  Structural biology of enzymes of the thiamin biosynthesis pathway.

Authors:  Ethan Settembre; Tadhg P Begley; Steven E Ealick
Journal:  Curr Opin Struct Biol       Date:  2003-12       Impact factor: 6.809

8.  Isoprenoid biosynthesis in plant chloroplasts via the MEP pathway: direct thylakoid/ferredoxin-dependent photoreduction of GcpE/IspG.

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Journal:  FEBS Lett       Date:  2006-02-02       Impact factor: 4.124

9.  Evidence for the thiamine biosynthetic pathway in higher-plant plastids and its developmental regulation.

Authors:  F C Belanger; T Leustek; B Chu; A L Kriz
Journal:  Plant Mol Biol       Date:  1995-11       Impact factor: 4.076

10.  Proteomics gives insight into the regulatory function of chloroplast thioredoxins.

Authors:  Yves Balmer; Antonius Koller; Gregorio del Val; Wanda Manieri; Peter Schürmann; Bob B Buchanan
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  44 in total

Review 1.  The importance of thiamine (vitamin B1) in plant health: From crop yield to biofortification.

Authors:  Teresa B Fitzpatrick; Lottie M Chapman
Journal:  J Biol Chem       Date:  2020-06-17       Impact factor: 5.157

2.  Computational identification of riboswitches based on RNA conserved functional sequences and conformations.

Authors:  Tzu-Hao Chang; Hsien-Da Huang; Li-Ching Wu; Chi-Ta Yeh; Baw-Jhiune Liu; Jorng-Tzong Horng
Journal:  RNA       Date:  2009-05-21       Impact factor: 4.942

3.  High-resolution crystal structure of the eukaryotic HMP-P synthase (THIC) from Arabidopsis thaliana.

Authors:  Sandrine Coquille; Céline Roux; Angad Mehta; Tadhg P Begley; Teresa B Fitzpatrick; Stéphane Thore
Journal:  J Struct Biol       Date:  2013-10-23       Impact factor: 2.867

4.  Identification of mitochondrial thiamin diphosphate carriers from Arabidopsis and maize.

Authors:  Océane Frelin; Gennaro Agrimi; Valentina L Laera; Alessandra Castegna; Lynn G L Richardson; Robert T Mullen; Claudia Lerma-Ortiz; Ferdinando Palmieri; Andrew D Hanson
Journal:  Funct Integr Genomics       Date:  2012-03-18       Impact factor: 3.410

5.  Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod.

Authors:  Laise Rosado-Souza; Sebastian Proost; Michael Moulin; Susan Bergmann; Samuel E Bocobza; Asaph Aharoni; Teresa B Fitzpatrick; Marek Mutwil; Alisdair R Fernie; Toshihiro Obata
Journal:  Plant Physiol       Date:  2019-03-05       Impact factor: 8.340

Review 6.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

7.  Reconstitution of ThiC in thiamine pyrimidine biosynthesis expands the radical SAM superfamily.

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8.  Mechanistic and functional versatility of radical SAM enzymes.

Authors:  Squire J Booker; Tyler L Grove
Journal:  F1000 Biol Rep       Date:  2010-07-14

9.  Identification and characterization of ADNT1, a novel mitochondrial adenine nucleotide transporter from Arabidopsis.

Authors:  Luigi Palmieri; Antonella Santoro; Fernando Carrari; Emanuela Blanco; Adriano Nunes-Nesi; Roberto Arrigoni; Francesco Genchi; Alisdair R Fernie; Ferdinando Palmieri
Journal:  Plant Physiol       Date:  2008-10-15       Impact factor: 8.340

10.  Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes.

Authors:  David Meinke; Colleen Sweeney; Rosanna Muralla
Journal:  PLoS One       Date:  2009-10-08       Impact factor: 3.240

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