| Literature DB >> 22958460 |
Rina P M Wong1, Gavin R Flematti, Timothy M E Davis.
Abstract
BACKGROUND: There remains a need for techniques that improve the sensitive detection of viable Plasmodium falciparum as part of diagnosis and therapeutic monitoring in clinical studies and usual-care management of malaria infections. A non-invasive breath test based on P. falciparum-associated specific volatile organic compounds (VOCs) could fill this gap and provide insights into parasite metabolism and pathogenicity. The aim of this study was to determine whether VOCs are present in the headspace above in vitro P. falciparum cultures.Entities:
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Year: 2012 PMID: 22958460 PMCID: PMC3468367 DOI: 10.1186/1475-2875-11-314
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Figure 1Prototype 1 culture-capture apparatus with SPME is shown in panel A. The prototype 1 design consisted of a 250 mL conical flask modified with a B-40 joint that served as a receptacle for an aluminium stopper. A delrin polymer SPME holder was screwed into the aluminium stopper and a syringe piercable polytetrafluoroethylene (PTFE) septum was placed between the mating surfaces to seal the sample before analysis. Design and dimensions of culture container (prototype 2) for headspace capture are shown in panel B. The wide-base (154 cm2) and shallow design maximizes culture efficiency and total parasite yield. The B-24 joint allows for easy access during RPMI addition and parasite sampling. Two side inlets facilitate the ease of low-oxygen gas-replacement and act as an access point for ‘purge and trap’ procedures and SPME of the headspace atmosphere.
Figure 2Chromatograms of VOCs detected in the headspace of cultured GC-MS total ion chromatogram derived from SPME (triple fibre) sampling of the headspace above in vitro cultures of P. falciparum infected red blood cells (top) and control red blood cells (bottom). Details of tentatively assigned compounds are presented in Table 1.
Representative VOCs detected in control and infected cultures using SPME (triple fibre) coupled with GC-MS (Figure2)
| | | ||
|---|---|---|---|
| 1.81 | carbon dioxide | 3539462 (1.39) | 1554307 (0.62) |
| 2.64 | octane | 646353 (0.25) | 783376 (0.31) |
| 3.40 | 2,4-dimethyl-1-heptene | 623570 (0.24) | 615473 (0.24) |
| 4.14 | octamethyl tetrasiloxane* | 724464 (0.28) | 560807 (0.22) |
| 4.33 | 2,2,4,6,6-pentamethyl heptane | 7031090 (2.76) | 8250249 (3.28) |
| 4.45 | 4-methyl nonane | 609038 (0.24) | 638770 (0.25) |
| 5.22 | 2,6-dimethyl nonane | 1740986 (0.68) | 1668518 (0.66 ) |
| 5.36 | decane | 6616172 (2.59) | 7986280 (3.18) |
| 5.50 | branched alkane (C11H24) | 1452353 (0.57) | 1453227 (0.58) |
| 6.07 | 2,6-dimethyl decane | 947057 (0.37) | 1061297 (0.42) |
| 6.17 | 3,7-dimethyl decane | 716160 (0.28) | 716355 (0.28) |
| 6.59 | toluene | 1000764 (0.39) | 962309 (0.38) |
| 6.70 | branched alkene (C11H22) | 1145337 (0.45) | 1218163 (0.48) |
| 6.92 | unidentified siloxane* | 2167416 (0.85) | 3703832 (1.47) |
| 7.44 | dodecane | 983881 (0.39) | 1189196 (0.47) |
| 7.82 | branched alkane (C12H26) | 698815 (0.27) | 1644428 (0.65) |
| 8.03 | branched alkene (C12H24) | 2883283 (1.13) | 2925879 (1.16) |
| 8.13 | branched alkene (C12H24) | 2891039 (1.13) | 2873277 (1.14) |
| 9.59 | alpha-pinene | 516866 (0.20) | 762074 (0.30) |
| 10.17 | 3-heptanone | 514761 (0.20) | 518528 (0.21) |
| 10.77 | isopropyl benzene | 404573 (0.16) | 498258 (0.20) |
| 11.36 | unidentified alkane | 910196 (0.36) | 725047 (0.29) |
| 11.57 | D-limonene | 451954 (0.18) | 398652 (0.16) |
| 13.22 | 2-pentyl furan | 979481 (0.38) | 1209153 (0.48) |
| 15.28 | cyclohexanone | 3714649 (1.46) | 4124560 (1.64) |
| 19.66 | cyclohexanol | 558229 (0.22) | 682196 (0.27) |
| 20.49 | 1,3-di-tert-butylbenzene | 10159046 (3.98) | 7908796 (3.15) |
| 21.28 | 1-octen-3-ol | 796995 (0.31) | 1909838 (0.76) |
| 22.56 | 2-ethyl-1-hexanol* | 198435706 (77.77) | 191847968 (76.31) |
| 23.23 | unidentified alkane | 1285623 (0.50) | 1027694 (0.41) |
*known contaminants.
Compounds were tentatively identified (> 95% similarity) by comparing the experimental mass spectra obtained with known compounds present in a commercial library of mass spectra (NIST05).