Literature DB >> 22935719

Genomic analysis of pediatric cataract in Saudi Arabia reveals novel candidate disease genes.

Mohammed A Aldahmesh1, Arif O Khan, Jawahir Y Mohamed, Hadia Hijazi, Mohammed Al-Owain, Abdulrahman Alswaid, Fowzan S Alkuraya.   

Abstract

BACKGROUND: Pediatric cataract is an important preventable blinding disease. Previous studies have estimated 10-25% of cases to be genetic in etiology.
METHODS: In an effort to characterize the genetics of cataract in our population, we have conducted a comprehensive clinical and genomic analysis (including autozygome and exome analysis) on a series of 38 index patients.
RESULTS: Pediatric cataract is genetic in at least 79% of the study families. Although crystallins accounted for most of the mutant alleles, mutations in other genes were encountered, including recessive mutations in genes that usually cause the disease in a dominant manner. In addition, several novel candidate genes (MFSD6L, AKR1E2, RNLS, and CYP51A1) were identified.
CONCLUSION: Pediatric cataract is typically a genetic disease, usually autosomal recessive, in Saudi Arabia. Although defining a specific cataract phenotype can sometimes predict the genetic cause, genomic analysis is often required to unravel the causative mutation given the marked genetic heterogeneity. The identified novel candidate genes require independent confirmation in future studies.

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Year:  2012        PMID: 22935719     DOI: 10.1038/gim.2012.86

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  30 in total

Review 1.  Inherited Congenital Cataract: A Guide to Suspect the Genetic Etiology in the Cataract Genesis.

Authors:  Olga Messina-Baas; Sergio A Cuevas-Covarrubias
Journal:  Mol Syndromol       Date:  2017-02-07

2.  Exome sequencing in 32 patients with anophthalmia/microphthalmia and developmental eye defects.

Authors:  A M Slavotinek; S T Garcia; G Chandratillake; T Bardakjian; E Ullah; D Wu; K Umeda; R Lao; P L-F Tang; E Wan; L Madireddy; S Lyalina; B A Mendelsohn; S Dugan; J Tirch; R Tischler; J Harris; M J Clark; S Chervitz; A Patwardhan; J M West; P Ursell; A de Alba Campomanes; A Schneider; P-Y Kwok; S Baranzini; R O Chen
Journal:  Clin Genet       Date:  2015-01-06       Impact factor: 4.438

3.  RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery.

Authors:  Deepti Anand; Atul Kakrana; Archana D Siddam; Hongzhan Huang; Irfan Saadi; Salil A Lachke
Journal:  Hum Genet       Date:  2018-11-11       Impact factor: 4.132

4.  Cutting edge: FYCO1 recruitment to dectin-1 phagosomes is accelerated by light chain 3 protein and regulates phagosome maturation and reactive oxygen production.

Authors:  Jun Ma; Courtney Becker; Christopher Reyes; David M Underhill
Journal:  J Immunol       Date:  2014-01-17       Impact factor: 5.422

5.  Novel phenotypes and loci identified through clinical genomics approaches to pediatric cataract.

Authors:  Nisha Patel; Deepti Anand; Dorota Monies; Sateesh Maddirevula; Arif O Khan; Talal Algoufi; Mohammed Alowain; Eissa Faqeih; Muneera Alshammari; Ahmed Qudair; Hadeel Alsharif; Fatimah Aljubran; Hessa S Alsaif; Niema Ibrahim; Firdous M Abdulwahab; Mais Hashem; Haifa Alsedairy; Mohammed A Aldahmesh; Salil A Lachke; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2016-11-22       Impact factor: 4.132

6.  Genomic analysis of Meckel-Gruber syndrome in Arabs reveals marked genetic heterogeneity and novel candidate genes.

Authors:  Ranad Shaheen; Eissa Faqeih; Muneera J Alshammari; Abdulrahman Swaid; Lihadh Al-Gazali; Elham Mardawi; Shinu Ansari; Sameera Sogaty; Mohammed Z Seidahmed; Muhammed I AlMotairi; Chantal Farra; Wesam Kurdi; Shatha Al-Rasheed; Fowzan S Alkuraya
Journal:  Eur J Hum Genet       Date:  2012-11-21       Impact factor: 4.246

7.  Phenotypes of Recessive Pediatric Cataract in a Cohort of Children with Identified Homozygous Gene Mutations (An American Ophthalmological Society Thesis).

Authors:  Arif O Khan; Mohammed A Aldahmesh; Fowzan S Alkuraya
Journal:  Trans Am Ophthalmol Soc       Date:  2015

Review 8.  The application of next-generation sequencing in the autozygosity mapping of human recessive diseases.

Authors:  Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2013-08-02       Impact factor: 4.132

Review 9.  Systems biology of lens development: A paradigm for disease gene discovery in the eye.

Authors:  Deepti Anand; Salil A Lachke
Journal:  Exp Eye Res       Date:  2016-03-16       Impact factor: 3.467

10.  Whole exome sequencing in dominant cataract identifies a new causative factor, CRYBA2, and a variety of novel alleles in known genes.

Authors:  Linda M Reis; Rebecca C Tyler; Sanaa Muheisen; Victor Raggio; Leonardo Salviati; Dennis P Han; Deborah Costakos; Hagith Yonath; Sarah Hall; Patricia Power; Elena V Semina
Journal:  Hum Genet       Date:  2013-03-19       Impact factor: 4.132

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