Literature DB >> 22933775

Genome sequence of Acinetobacter sp. strain HA, isolated from the gut of the polyphagous insect pest Helicoverpa armigera.

Jaya Malhotra1, Ankita Dua, Anjali Saxena, Naseer Sangwan, Udita Mukherjee, Neeti Pandey, Raman Rajagopal, Paramjit Khurana, Jitendra P Khurana, Rup Lal.   

Abstract

In this study, Acinetobacter sp. strain HA was isolated from the midgut of a fifth-instar larva of Helicoverpa armigera. Here, we report the draft genome sequence (3,125,085 bp) of this strain that consists of 102 contigs, 2,911 predicted coding sequences, and a G+C content of 41%.

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Year:  2012        PMID： 22933775      PMCID： PMC3430320          DOI： 10.1128/JB.01194-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  The KEGG resource for deciphering the genome.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Yasushi Okuno; Masahiro Hattori
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies.

Authors:  Sébastien Boisvert; François Laviolette; Jacques Corbeil
Journal:  J Comput Biol       Date:  2010-10-20       Impact factor: 1.479

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Esterase-mediated resistance to pyrethroids in field populations of Helicoverpa armigera (Lepidoptera: Noctuidae) from Central Africa.

Authors:  Joseph Achaleke; Thibaud Martin; Richard T Ghogomu; Maurice Vaissayre; Thierry Brévault
Journal:  Pest Manag Sci       Date:  2009-10       Impact factor: 4.845

5.  Host plant induced variation in gut bacteria of Helicoverpa armigera.

Authors:  Natarajan Gayatri Priya; Abhishek Ojha; Mayur K Kajla; Anand Raj; Raman Rajagopal
Journal:  PLoS One       Date:  2012-01-26       Impact factor: 3.240

6.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

7.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  7 in total
  7 in total

Review 1.  Diversity and Functional Roles of the Gut Microbiota in Lepidopteran Insects.

Authors:  Xiancui Zhang; Fan Zhang; Xingmeng Lu
Journal:  Microorganisms       Date:  2022-06-16

2.  Soil Environments Influence Gut Prokaryotic Communities in the Larvae of the Invasive Japanese Beetle Popillia japonica Newman.

Authors:  Helena Avila-Arias; Michael E Scharf; Ronald F Turco; Douglas S Richmond
Journal:  Front Microbiol       Date:  2022-04-27       Impact factor: 6.064

3.  Carbapenem-resistance and pathogenicity of bovine Acinetobacter indicus-like isolates.

Authors:  Peter Klotz; Stephan Göttig; Ursula Leidner; Torsten Semmler; Sandra Scheufen; Christa Ewers
Journal:  PLoS One       Date:  2017-02-16       Impact factor: 3.240

4.  Bacterial communities in natural versus pesticide-treated Aphis gossypii populations in North China.

Authors:  Shuai Zhang; Junyu Luo; Li Wang; Lijuan Zhang; Xiangzhen Zhu; Weili Jiang; Jinjie Cui
Journal:  Microbiologyopen       Date:  2018-06-07       Impact factor: 3.139

5.  Diversity of culturable bacteria including Pantoea in wild mosquito Aedes albopictus.

Authors:  Claire Valiente Moro; Florence Hélène Tran; Fara Nantenaina Raharimalala; Pierre Ravelonandro; Patrick Mavingui
Journal:  BMC Microbiol       Date:  2013-03-27       Impact factor: 3.605

6.  Structural differences in gut bacteria communities in developmental stages of natural populations of Lutzomyia evansi from Colombia's Caribbean coast.

Authors:  Rafael José Vivero; Natalia Gil Jaramillo; Gloria Cadavid-Restrepo; Sandra I Uribe Soto; Claudia Ximena Moreno Herrera
Journal:  Parasit Vectors       Date:  2016-09-13       Impact factor: 3.876

7.  Gut bacterial and fungal communities of the domesticated silkworm (Bombyx mori) and wild mulberry-feeding relatives.

Authors:  Bosheng Chen; Kaiqian Du; Chao Sun; Arunprasanna Vimalanathan; Xili Liang; Yong Li; Baohong Wang; Xingmeng Lu; Lanjuan Li; Yongqi Shao
Journal:  ISME J       Date:  2018-06-12       Impact factor: 10.302
  7 in total

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