Literature DB >> 22933773

Draft genome sequence of Alcaligenes faecalis subsp. faecalis NCIB 8687 (CCUG 2071).

Le T Phung1, William L Trimble, Folker Meyer, Jack A Gilbert, Simon Silver.   

Abstract

Alcaligenes faecalis subsp. faecalis NCIB 8687, the betaproteobacterium from which arsenite oxidase had its structure solved and the first "arsenate gene island" identified, provided a draft genome of 3.9 Mb in 186 contigs (with the largest 15 comprising 90% of the total) for this opportunistic pathogen species.

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Year:  2012        PMID： 22933773      PMCID： PMC3430353          DOI： 10.1128/JB.01185-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  5 in total

1.  Bacterial oxidation of arsenite. I. Description of bacteria isolated from arsenical cattle-dipping fluids.

Authors:  A W TURNER
Journal:  Aust J Biol Sci       Date:  1954-11

2.  Unified nomenclature for genes involved in prokaryotic aerobic arsenite oxidation.

Authors:  Marie-Claire Lett; Daniel Muller; Didier Lièvremont; Simon Silver; Joanne Santini
Journal:  J Bacteriol       Date:  2011-11-04       Impact factor: 3.490

Review 3.  Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic.

Authors:  Simon Silver; L T Phung
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

4.  The purification and characterization of arsenite oxidase from Alcaligenes faecalis, a molybdenum-containing hydroxylase.

Authors:  G L Anderson; J Williams; R Hille
Journal:  J Biol Chem       Date:  1992-11-25       Impact factor: 5.157

5.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  5 in total
  12 in total

1.  Draft genome sequence of Achromobacter piechaudii strain HLE.

Authors:  William L Trimble; Le T Phung; Folker Meyer; Simon Silver; Jack A Gilbert
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

2.  Draft genome sequence of Agrobacterium albertimagni strain AOL15.

Authors:  William L Trimble; Le T Phung; Folker Meyer; Jack A Gilbert; Simon Silver
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

3.  Alcaligenes faecalis ZD02, a Novel Nematicidal Bacterium with an Extracellular Serine Protease Virulence Factor.

Authors:  Shouyong Ju; Jian Lin; Jinshui Zheng; Shaoying Wang; Hongying Zhou; Ming Sun
Journal:  Appl Environ Microbiol       Date:  2016-01-29       Impact factor: 4.792

4.  Organization and regulation of the arsenite oxidase operon of the moderately acidophilic and facultative chemoautotrophic Thiomonas arsenitoxydans.

Authors:  Djamila Slyemi; Danielle Moinier; Emmanuel Talla; Violaine Bonnefoy
Journal:  Extremophiles       Date:  2013-08-24       Impact factor: 2.395

5.  In silico analysis of bacterial arsenic islands reveals remarkable synteny and functional relatedness between arsenate and phosphate.

Authors:  Hang Li; Mingshun Li; Yinyan Huang; Christopher Rensing; Gejiao Wang
Journal:  Front Microbiol       Date:  2013-11-20       Impact factor: 5.640

6.  Genomic evidence reveals the extreme diversity and wide distribution of the arsenic-related genes in Burkholderiales.

Authors:  Xiangyang Li; Linshuang Zhang; Gejiao Wang
Journal:  PLoS One       Date:  2014-03-14       Impact factor: 3.240

7.  Identification of a new Alcaligenes faecalis strain MOR02 and assessment of its toxicity and pathogenicity to insects.

Authors:  Rosa Estela Quiroz-Castañeda; Ared Mendoza-Mejía; Verónica Obregón-Barboza; Fernando Martínez-Ocampo; Armando Hernández-Mendoza; Felipe Martínez-Garduño; Gabriel Guillén-Solís; Federico Sánchez-Rodríguez; Guadalupe Peña-Chora; Laura Ortíz-Hernández; Paul Gaytán-Colín; Edgar Dantán-González
Journal:  Biomed Res Int       Date:  2015-01-18       Impact factor: 3.411

8.  Genome Sequence of Alcaligenes sp. Strain HPC1271.

Authors:  Atya Kapley; Sneha Sagarkar; Himgouri Tanksale; Nandita Sharma; Asifa Qureshi; Anshuman Khardenavis; Hemant J Purohit
Journal:  Genome Announc       Date:  2013-02-21

9.  Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf.

Authors:  Giada Ferrari; Heidi E L Lischer; Judith Neukamm; Enrique Rayo; Nicole Borel; Andreas Pospischil; Frank Rühli; Abigail S Bouwman; Michael G Campana
Journal:  Genes (Basel)       Date:  2018-08-31       Impact factor: 4.096

10.  Complete genome sequence and analysis of Alcaligenes faecalis strain Mc250, a new potential plant bioinoculant.

Authors:  Érica Barbosa Felestrino; Angélica Bianchini Sanchez; Washington Luiz Caneschi; Camila Gracyelle de Carvalho Lemes; Renata de Almeida Barbosa Assis; Isabella Ferreira Cordeiro; Natasha Peixoto Fonseca; Morghana Marina Villa; Izadora Tabuso Vieira; Luciana Hiromi Yoshino Kamino; Flávio Fonseca do Carmo; Aline Maria da Silva; Andrew Maltez Thomas; José Salvatore Leister Patané; Fernanda Carla Ferreira; Leandro Grassi de Freitas; Alessandro de Mello Varani; Jesus Aparecido Ferro; Robson Soares Silva; Nalvo Franco Almeida; Camila Carrião Machado Garcia; João Carlos Setubal; Leandro Marcio Moreira
Journal:  PLoS One       Date:  2020-11-05       Impact factor: 3.240
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