Literature DB >> 22923804

Escherichia coli O157:H7 typing phage V7 is a T4-like virus.

Andrew M Kropinski1, Erika J Lingohr, Dianne M Moyles, Andrew Chibeu, Amanda Mazzocco, Kristyn Franklin, Andre Villegas, Rafiq Ahmed, Yi-Min She, Roger P Johnson.   

Abstract

The complete genome sequence of the Escherichia coli O157:H7 typing phage V7 was determined. Its double-stranded DNA genome is 166,452 bp long, encoding 273 proteins and including 11 tRNAs. This virus belongs to the genus T4-like viruses within the subfamily Tevenvirinae, family Myoviridae.

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Year:  2012        PMID： 22923804      PMCID： PMC3446600          DOI： 10.1128/JVI.01642-12

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  11 in total

1.  The structural proteome of Pseudomonas aeruginosa bacteriophage phiKMV.

Authors:  Rob Lavigne; Jean-Paul Noben; Kirsten Hertveldt; Pieter-Jan Ceyssens; Yves Briers; Debora Dumont; Bart Roucourt; Victor N Krylov; Vadim V Mesyanzhinov; Johan Robben; Guido Volckaert
Journal:  Microbiology (Reading)       Date:  2006-02       Impact factor: 2.777

2.  In silico identification of genes in bacteriophage DNA.

Authors:  Andrew M Kropinski; Mark Borodovsky; Tim J Carver; Ana M Cerdeño-Tárraga; Aaron Darling; Alexandre Lomsadze; Padmanabhan Mahadevan; Paul Stothard; Donald Seto; Gary Van Domselaar; David S Wishart
Journal:  Methods Mol Biol       Date:  2009

3.  Phage proteomics: applications of mass spectrometry.

Authors:  Rob Lavigne; Pieter-Jan Ceyssens; J Robben
Journal:  Methods Mol Biol       Date:  2009

4.  Approaches to the compositional analysis of DNA.

Authors:  Richard A Manderville; Andrew M Kropinski
Journal:  Methods Mol Biol       Date:  2009

5.  Phage-typing scheme for Escherichia coli O157:H7.

Authors:  R Ahmed; C Bopp; A Borczyk; S Kasatiya
Journal:  J Infect Dis       Date:  1987-04       Impact factor: 5.226

Review 6.  Modified bases in bacteriophage DNAs.

Authors:  R A Warren
Journal:  Annu Rev Microbiol       Date:  1980       Impact factor: 15.500

7.  T4-Like genome organization of the Escherichia coli O157:H7 lytic phage AR1.

Authors:  Wei-Chao Liao; Wailap Victor Ng; I-Hsuan Lin; Wan-Jr Syu; Tze-Tze Liu; Chuan-Hsiung Chang
Journal:  J Virol       Date:  2011-04-20       Impact factor: 5.103

8.  AutoFACT: an automatic functional annotation and classification tool.

Authors:  Liisa B Koski; Michael W Gray; B Franz Lang; Gertraud Burger
Journal:  BMC Bioinformatics       Date:  2005-06-16       Impact factor: 3.169

9.  CoreGenes: a computational tool for identifying and cataloging "core" genes in a set of small genomes.

Authors:  Nikhat Zafar; Raja Mazumder; Donald Seto
Journal:  BMC Bioinformatics       Date:  2002-04-24       Impact factor: 3.169

10.  Classification of Myoviridae bacteriophages using protein sequence similarity.

Authors:  Rob Lavigne; Paul Darius; Elizabeth J Summer; Donald Seto; Padmanabhan Mahadevan; Anders S Nilsson; Hans W Ackermann; Andrew M Kropinski
Journal:  BMC Microbiol       Date:  2009-10-26       Impact factor: 3.605
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  6 in total

1.  Differing populations of endemic bacteriophages in cattle shedding high and low numbers of Escherichia coli O157:H7 bacteria in feces.

Authors:  J Hallewell; Y D Niu; K Munns; T A McAllister; R P Johnson; H-W Ackermann; J E Thomas; K Stanford
Journal:  Appl Environ Microbiol       Date:  2014-04-18       Impact factor: 4.792

2.  Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages.

Authors:  Lauren A Cowley; Stephen J Beckett; Margo Chase-Topping; Neil Perry; Tim J Dallman; David L Gally; Claire Jenkins
Journal:  BMC Genomics       Date:  2015-04-08       Impact factor: 3.969

3.  Rapid and accurate detection of bacteriophage activity against Escherichia coli O157:H7 by propidium monoazide real-time PCR.

Authors:  Hui Liu; Yan D Niu; Jinquan Li; Kim Stanford; Tim A McAllister
Journal:  Biomed Res Int       Date:  2014-11-02       Impact factor: 3.411

4.  Characterization of two polyvalent phages infecting Enterobacteriaceae.

Authors:  Sana Hamdi; Geneviève M Rousseau; Simon J Labrie; Denise M Tremblay; Rim Saïed Kourda; Karim Ben Slama; Sylvain Moineau
Journal:  Sci Rep       Date:  2017-01-16       Impact factor: 4.379

5.  Efficacy of Individual Bacteriophages Does Not Predict Efficacy of Bacteriophage Cocktails for Control of Escherichia coli O157.

Authors:  Yan D Niu; Hui Liu; Hechao Du; Ruiqiang Meng; El Sayed Mahmoud; Guihua Wang; Tim A McAllister; Kim Stanford
Journal:  Front Microbiol       Date:  2021-02-24       Impact factor: 5.640

6.  The host-range, genomics and proteomics of Escherichia coli O157:H7 bacteriophage rV5.

Authors:  Andrew M Kropinski; Tom Waddell; Juncai Meng; Kristyn Franklin; Hans-Wolfgang Ackermann; Rafiq Ahmed; Amanda Mazzocco; John Yates; Erika J Lingohr; Roger P Johnson
Journal:  Virol J       Date:  2013-03-06       Impact factor: 4.099
  6 in total

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