Literature DB >> 22922161

Epigenetic obstacles encountered by transcription factors: reprogramming against all odds.

Casey A Gifford1, Alexander Meissner.   

Abstract

Reprogramming of a somatic nucleus to an induced pluripotent state can be achieved in vitro through ectopic expression of Oct4 (Pou5f1), Sox2, Klf4 and c-Myc. While the ability of these factors to regulate transcription in a pluripotent context has been studied extensively, their ability to interact with and remodel a somatic genome remains underexplored. Several recent studies have begun to provide mechanistic insights that will eventually lead to a more rational design and improved understanding of nuclear reprogramming.
Copyright © 2012 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22922161      PMCID: PMC3490009          DOI: 10.1016/j.gde.2012.08.002

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  93 in total

1.  Two domains of MyoD mediate transcriptional activation of genes in repressive chromatin: a mechanism for lineage determination in myogenesis.

Authors:  A N Gerber; T R Klesert; D A Bergstrom; S J Tapscott
Journal:  Genes Dev       Date:  1997-02-15       Impact factor: 11.361

2.  Viable offspring derived from fetal and adult mammalian cells.

Authors:  I Wilmut; A E Schnieke; J McWhir; A J Kind; K H Campbell
Journal:  Nature       Date:  1997-02-27       Impact factor: 49.962

Review 3.  Regulation of muscle differentiation by the MEF2 family of MADS box transcription factors.

Authors:  E N Olson; M Perry; R A Schulz
Journal:  Dev Biol       Date:  1995-11       Impact factor: 3.582

4.  Self-association of the erythroid transcription factor GATA-1 mediated by its zinc finger domains.

Authors:  M Crossley; M Merika; S H Orkin
Journal:  Mol Cell Biol       Date:  1995-05       Impact factor: 4.272

5.  Phosphorylation inhibits the DNA-binding activity of MyoD homodimers but not MyoD-E12 heterodimers.

Authors:  K Mitsui; M Shirakata; B M Paterson
Journal:  J Biol Chem       Date:  1993-11-15       Impact factor: 5.157

6.  Use of a conditional MyoD transcription factor in studies of MyoD trans-activation and muscle determination.

Authors:  S M Hollenberg; P F Cheng; H Weintraub
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

7.  Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5.

Authors:  K L Clark; E D Halay; E Lai; S K Burley
Journal:  Nature       Date:  1993-07-29       Impact factor: 49.962

8.  DNA-binding specificities of the GATA transcription factor family.

Authors:  L J Ko; J D Engel
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

9.  Sp1 elements protect a CpG island from de novo methylation.

Authors:  M Brandeis; D Frank; I Keshet; Z Siegfried; M Mendelsohn; A Nemes; V Temper; A Razin; H Cedar
Journal:  Nature       Date:  1994-09-29       Impact factor: 49.962

10.  Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island.

Authors:  D Macleod; J Charlton; J Mullins; A P Bird
Journal:  Genes Dev       Date:  1994-10-01       Impact factor: 11.361

View more
  15 in total

1.  Understanding impediments to cellular conversion to pluripotency by assessing the earliest events in ectopic transcription factor binding to the genome.

Authors:  Abdenour Soufi; Kenneth S Zaret
Journal:  Cell Cycle       Date:  2013-04-19       Impact factor: 4.534

Review 2.  Intrinsic mechanisms of neuronal axon regeneration.

Authors:  Marcus Mahar; Valeria Cavalli
Journal:  Nat Rev Neurosci       Date:  2018-06       Impact factor: 34.870

3.  Tamoxifen induces a pluripotency signature in breast cancer cells and human tumors.

Authors:  George Notas; Vassiliki Pelekanou; Marilena Kampa; Konstantinos Alexakis; Stelios Sfakianakis; Aggelos Laliotis; John Askoxilakis; Eleftheria Tsentelierou; Maria Tzardi; Andreas Tsapis; Elias Castanas
Journal:  Mol Oncol       Date:  2015-06-05       Impact factor: 6.603

Review 4.  Investigating the transcriptional control of cardiovascular development.

Authors:  Irfan S Kathiriya; Elphège P Nora; Benoit G Bruneau
Journal:  Circ Res       Date:  2015-02-13       Impact factor: 17.367

Review 5.  Making β cells from adult cells within the pancreas.

Authors:  Philippe A Lysy; Gordon C Weir; Susan Bonner-Weir
Journal:  Curr Diab Rep       Date:  2013-10       Impact factor: 4.810

6.  Transcriptional and epigenetic dynamics during specification of human embryonic stem cells.

Authors:  Casey A Gifford; Michael J Ziller; Hongcang Gu; Cole Trapnell; Julie Donaghey; Alexander Tsankov; Alex K Shalek; David R Kelley; Alexander A Shishkin; Robbyn Issner; Xiaolan Zhang; Michael Coyne; Jennifer L Fostel; Laurie Holmes; Jim Meldrim; Mitchell Guttman; Charles Epstein; Hongkun Park; Oliver Kohlbacher; John Rinn; Andreas Gnirke; Eric S Lander; Bradley E Bernstein; Alexander Meissner
Journal:  Cell       Date:  2013-05-09       Impact factor: 41.582

7.  Oct4 maintains the pluripotency of human embryonic stem cells by inactivating p53 through Sirt1-mediated deacetylation.

Authors:  Zhen-Ning Zhang; Sun-Ku Chung; Zheng Xu; Yang Xu
Journal:  Stem Cells       Date:  2014-01       Impact factor: 6.277

Review 8.  Germline and Pluripotent Stem Cells.

Authors:  Wolf Reik; M Azim Surani
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-11-02       Impact factor: 10.005

9.  Genome-wide predictors of NF-κB recruitment and transcriptional activity.

Authors:  Marcin Cieślik; Stefan Bekiranov
Journal:  BioData Min       Date:  2015-11-26       Impact factor: 2.522

10.  FOXA1 potentiates lineage-specific enhancer activation through modulating TET1 expression and function.

Authors:  Yeqing A Yang; Jonathan C Zhao; Ka-Wing Fong; Jung Kim; Shangze Li; Chunxiao Song; Bing Song; Bin Zheng; Chuan He; Jindan Yu
Journal:  Nucleic Acids Res       Date:  2016-06-01       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.