Literature DB >> 2291941

Correlation analysis of gap junction lattice images.

G E Sosinsky1, T S Baker, D L Caspar, D A Goodenough.   

Abstract

Fourier averages of connexon images computed from low-irradiation electron micrographs of isolated negatively stained gap junction domains exhibited differences in stain distribution and connexon orientation. To analyze these polymorphic structures, correlation averaging methods were applied to images from negatively stained and frozen-hydrated specimens. For the negatively stained specimens, separate averages over two subsets of connexons with differing degrees of stain accumulation in the axial channel were obtained. Two populations of connexons with opposite skew orientations were distinguishable within a single junctional domain of a frozen-hydrated specimen. Correlation maps calculated using the left- and right-skewed references showed that the selected connexons tend to locally cluster. Using correlation methods to analyze packing disorder in a typical connexon lattice, we estimated the root-mean-square variation in the nearest neighbor pair separation to be approximately 11% of the lattice constant. Displacements of the connexons relative to each other increased with increasing pair separation in the lattice, rather like a liquid, although long-range orientation order was conserved as in a crystal. These results support the hypothesis that the hexagonal ordering of the connexons results from short-range repulsive forces.

Mesh:

Year:  1990        PMID: 2291941      PMCID: PMC1281066          DOI: 10.1016/S0006-3495(90)82462-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  15 in total

1.  Experimental observation of two-stage melting in a classical two-dimensional screened Coulomb system.

Authors: 
Journal:  Phys Rev Lett       Date:  1987-03-23       Impact factor: 9.161

2.  Gap junction structures. VIII. Membrane cross-sections.

Authors:  G E Sosinsky; J C Jésior; D L Caspar; D A Goodenough
Journal:  Biophys J       Date:  1988-05       Impact factor: 4.033

3.  In-plane phase transition of an integral membrane protein: nucleation of the OmpF matrix porin rectangular polymorph.

Authors:  D L Dorset; A K Massalski; J P Rosenbusch
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

4.  The characterization of structural variations within a crystal field.

Authors:  J Frank; W Chiu; L Degn
Journal:  Ultramicroscopy       Date:  1988       Impact factor: 2.689

5.  Negative staining characteristics of arrays of mitochondrial pore protein: use of correspondence analysis to classify different staining patterns.

Authors:  C A Mannella; J Frank
Journal:  Ultramicroscopy       Date:  1984       Impact factor: 2.689

6.  Gap junction structures. VI. Variation and conservation in connexon conformation and packing.

Authors:  L Makowski; D L Caspar; W C Phillips; T S Baker; D A Goodenough
Journal:  Biophys J       Date:  1984-01       Impact factor: 4.033

7.  The correlation averaging of a regularly arranged bacterial cell envelope protein.

Authors:  W O Saxton; W Baumeister
Journal:  J Microsc       Date:  1982-08       Impact factor: 1.758

8.  Structure of the Channels in the Outer Mitochondrial Membrane: Electron Microscopic Studies of the Periodic Arrays Induced by Phospholipase a(2) Treatment of the Neurospora membrane.

Authors:  C A Mannella; A Ribeiro; J Frank
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

9.  Reconstruction of imperfectly ordered zinc-induced tubulin sheets using cross-correlation and real space averaging.

Authors:  R H Crepeau; E K Fram
Journal:  Ultramicroscopy       Date:  1981       Impact factor: 2.689

10.  Gap junction structures. IV. Asymmetric features revealed by low-irradiation microscopy.

Authors:  T S Baker; D L Caspar; C J Hollingshead; D A Goodenough
Journal:  J Cell Biol       Date:  1983-01       Impact factor: 10.539

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  6 in total

1.  Structural studies of tropomyosin by cryoelectron microscopy and x-ray diffraction.

Authors:  D Cabral-Lilly; G N Phillips; G E Sosinsky; L Melanson; S Chacko; C Cohen
Journal:  Biophys J       Date:  1991-04       Impact factor: 4.033

Review 2.  Molecular organization of gap junction membrane channels.

Authors:  G E Sosinsky
Journal:  J Bioenerg Biomembr       Date:  1996-08       Impact factor: 2.945

3.  Preparation, characterization, and structure of half gap junctional layers split with urea and EGTA.

Authors:  S Ghoshroy; D A Goodenough; G E Sosinsky
Journal:  J Membr Biol       Date:  1995-07       Impact factor: 1.843

4.  Mixing of connexins in gap junction membrane channels.

Authors:  G Sosinsky
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

5.  Structure of the extracellular surface of the gap junction by atomic force microscopy.

Authors:  J H Hoh; G E Sosinsky; J P Revel; P K Hansma
Journal:  Biophys J       Date:  1993-07       Impact factor: 4.033

6.  Self-assembly of membrane junctions.

Authors:  R Bruinsma; M Goulian; P Pincus
Journal:  Biophys J       Date:  1994-08       Impact factor: 4.033

  6 in total

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