Literature DB >> 22918579

The origin recognition complex: a biochemical and structural view.

Huilin Li1, Bruce Stillman.   

Abstract

The origin recognition complex (ORC) was first discovered in the baker's yeast in 1992. Identification of ORC opened up a path for subsequent molecular level investigations on how eukaryotic cells initiate and control genome duplication each cell cycle. Twenty years after the first biochemical isolation, ORC is now taking on a three-dimensional shape, although a very blurry shape at the moment, thanks to the recent electron microscopy and image reconstruction efforts. In this chapter, we outline the current biochemical knowledge about ORC from several eukaryotic systems, with emphasis on the most recent structural and biochemical studies. Despite many species-specific properties, an emerging consensus is that ORC is an ATP-dependent machine that recruits other key proteins to form pre-replicative complexes (pre-RCs) at many origins of DNA replication, enabling the subsequent initiation of DNA replication in S phase.

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Year:  2012        PMID: 22918579      PMCID: PMC3779782          DOI: 10.1007/978-94-007-4572-8_3

Source DB:  PubMed          Journal:  Subcell Biochem        ISSN: 0306-0225


  180 in total

1.  The cyclin-dependent kinase Cdc28p regulates distinct modes of Cdc6p proteolysis during the budding yeast cell cycle.

Authors:  L S Drury; G Perkins; J F Diffley
Journal:  Curr Biol       Date:  2000-03-09       Impact factor: 10.834

2.  Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication.

Authors:  Meleah A Hickman; Laura N Rusche
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

3.  Chromatin signatures of the Drosophila replication program.

Authors:  Matthew L Eaton; Joseph A Prinz; Heather K MacAlpine; George Tretyakov; Peter V Kharchenko; David M MacAlpine
Journal:  Genome Res       Date:  2010-12-22       Impact factor: 9.043

4.  CDK prevents Mcm2-7 helicase loading by inhibiting Cdt1 interaction with Orc6.

Authors:  Shuyan Chen; Stephen P Bell
Journal:  Genes Dev       Date:  2011-02-02       Impact factor: 11.361

5.  Drosophila ORC specifically binds to ACE3, an origin of DNA replication control element.

Authors:  R J Austin; T L Orr-Weaver; S P Bell
Journal:  Genes Dev       Date:  1999-10-15       Impact factor: 11.361

6.  Identification and reconstitution of the origin recognition complex from Schizosaccharomyces pombe.

Authors:  K Y Moon; D Kong; J K Lee; S Raychaudhuri; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

7.  Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers.

Authors:  Michiel Vermeulen; H Christian Eberl; Filomena Matarese; Hendrik Marks; Sergei Denissov; Falk Butter; Kenneth K Lee; Jesper V Olsen; Anthony A Hyman; Henk G Stunnenberg; Matthias Mann
Journal:  Cell       Date:  2010-09-17       Impact factor: 41.582

8.  A WD-repeat protein stabilizes ORC binding to chromatin.

Authors:  Zhen Shen; Kizhakke M Sathyan; Yijie Geng; Ruiping Zheng; Arindam Chakraborty; Brian Freeman; Fei Wang; Kannanganattu V Prasanth; Supriya G Prasanth
Journal:  Mol Cell       Date:  2010-10-08       Impact factor: 17.970

Review 9.  ORC binding, gene amplification, and the nature of metazoan replication origins.

Authors:  A C Spradling
Journal:  Genes Dev       Date:  1999-10-15       Impact factor: 11.361

10.  Nucleosome-interacting proteins regulated by DNA and histone methylation.

Authors:  Till Bartke; Michiel Vermeulen; Blerta Xhemalce; Samuel C Robson; Matthias Mann; Tony Kouzarides
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

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  29 in total

Review 1.  Preparation for DNA replication: the key to a successful S phase.

Authors:  Juanita C Limas; Jeanette Gowen Cook
Journal:  FEBS Lett       Date:  2019-10-15       Impact factor: 4.124

Review 2.  Structure and evolutionary origins of the CMG complex.

Authors:  Silvia Onesti; Stuart A MacNeill
Journal:  Chromosoma       Date:  2013-02-15       Impact factor: 4.316

Review 3.  Cryo-EM of dynamic protein complexes in eukaryotic DNA replication.

Authors:  Jingchuan Sun; Zuanning Yuan; Lin Bai; Huilin Li
Journal:  Protein Sci       Date:  2016-09-14       Impact factor: 6.725

4.  The Yeast Heterochromatin Protein Sir3 Experienced Functional Changes in the AAA+ Domain After Gene Duplication and Subfunctionalization.

Authors:  Ashleigh S Hanner; Laura N Rusche
Journal:  Genetics       Date:  2017-08-21       Impact factor: 4.562

5.  The dynamics of eukaryotic replication initiation: origin specificity, licensing, and firing at the single-molecule level.

Authors:  Daniel Duzdevich; Megan D Warner; Simina Ticau; Nikola A Ivica; Stephen P Bell; Eric C Greene
Journal:  Mol Cell       Date:  2015-04-23       Impact factor: 17.970

6.  RPA Interacts with HIRA and Regulates H3.3 Deposition at Gene Regulatory Elements in Mammalian Cells.

Authors:  Honglian Zhang; Haiyun Gan; Zhiquan Wang; Jeong-Heon Lee; Hui Zhou; Tamas Ordog; Marc S Wold; Mats Ljungman; Zhiguo Zhang
Journal:  Mol Cell       Date:  2017-01-19       Impact factor: 17.970

7.  ORC4 surrounds extruded chromatin in female meiosis.

Authors:  Hieu Nguyen; Michael A Ortega; Myungjun Ko; Joel Marh; W Steven Ward
Journal:  J Cell Biochem       Date:  2015-05       Impact factor: 4.429

8.  Ndt80 activates the meiotic ORC1 transcript isoform and SMA2 via a bi-directional middle sporulation element in Saccharomyces cerevisiae.

Authors:  Bingning Xie; Joe Horecka; Angela Chu; Ronald W Davis; Emmanuelle Becker; Michael Primig
Journal:  RNA Biol       Date:  2016-06-30       Impact factor: 4.652

9.  Molecular mechanisms of eukaryotic origin initiation, replication fork progression, and chromatin maintenance.

Authors:  Zuanning Yuan; Huilin Li
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

Review 10.  Chromosome Duplication in Saccharomyces cerevisiae.

Authors:  Stephen P Bell; Karim Labib
Journal:  Genetics       Date:  2016-07       Impact factor: 4.562

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