Literature DB >> 22911500

Minimisation of sensitivity losses due to the use of gradient pulses in triple-resonance NMR of proteins.

J Stonehouse1, R T Clowes, G L Shaw, J Keeler, E D Laue.   

Abstract

The use of pulsed field gradients in multiple-pulse NMR experiments has many advantages, including the possibility of obtaining excellent water suppression without the need for selective presaturation. In such gradient experiments the water magnetization is dephased deliberately; exchange between the saturated protons of the solvent water and the NH protons of a protein transfers this saturation to the protein. As the solvent is in large excess and relaxes relatively slowly, the result is a reduction in the sensitivity of the experiment due to the fact that the NH proton magnetization is only partially recovered. These effects can be avoided by ensuring that the water magnetization remains intact and is returned to the +z-axis at the start of data acquisition. General procedures for achieving this aim in any triple-resonance experiment are outlined and two specific examples are given. Experimental results confirm the sensitivity advantage of the modified sequences.

Entities:  

Year:  1995        PMID: 22911500     DOI: 10.1007/BF00211750

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  5 in total

1.  Improving solvent suppression in jump-return NOESY experiments.

Authors:  J Stonehouse; G L Shaw; J Keeler
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

2.  Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins.

Authors:  D Marion; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1983-06-29       Impact factor: 3.575

3.  A new 3D HN(CA)HA experiment for obtaining fingerprint HN-Halpha peaks in 15N- and 13C-labeled proteins.

Authors:  R T Clubb; V Thanabal; G Wagner
Journal:  J Biomol NMR       Date:  1992-03       Impact factor: 2.835

4.  A refocused and optimized HNCA: increased sensitivity and resolution in large macromolecules.

Authors:  B T Farmer; R A Venters; L D Spicer; M G Wittekind; L Müller
Journal:  J Biomol NMR       Date:  1992-03       Impact factor: 2.835

5.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

  5 in total
  8 in total

1.  Doubly sensitivity-enhanced 3D TOCSY-HSQC.

Authors:  S S Wijmenga; C P van Mierlo; E Steensma
Journal:  J Biomol NMR       Date:  1996-10       Impact factor: 2.835

2.  NMR structure of the N-terminal domain of the replication initiator protein DnaA.

Authors:  Thomas J Lowery; Jeffrey G Pelton; John-Marc Chandonia; Rosalind Kim; Hisao Yokota; David E Wemmer
Journal:  J Struct Funct Genomics       Date:  2007-08-07

3.  Some practical aspects of B(0) gradient pulses.

Authors:  M Czisch; A Ross; C Cieslar; T A Holak
Journal:  J Biomol NMR       Date:  1996-03       Impact factor: 2.835

4.  Origin and removal of mixed-phase artifacts in gradient sensitivity enhanced heteronuclear single quantum correlation spectra.

Authors:  Frans A A Mulder; Renee Otten; Ruud M Scheek
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

5.  TROSY NMR with partially deuterated proteins.

Authors:  A Eletsky; A Kienhöfer; K Pervushin
Journal:  J Biomol NMR       Date:  2001-06       Impact factor: 2.835

6.  Efficient 13C/15N double labeling of the avirulence protein AVR4 in a methanol-utilizing strain (Mut+) of Pichia pastoris.

Authors:  H A van den Burg; P J de Wit; J Vervoort
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

7.  Solution structure of Escherichia coli Par10: The prototypic member of the Parvulin family of peptidyl-prolyl cis/trans isomerases.

Authors:  Angelika Kühlewein; Georg Voll; Birte Hernandez Alvarez; Horst Kessler; Gunter Fischer; Jens-Ulrich Rahfeld; Gerd Gemmecker
Journal:  Protein Sci       Date:  2004-09       Impact factor: 6.725

8.  Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051.

Authors:  Cheng-Yu Chen; Woonghee Lee; Paul A Renhowe; Joon Jung; William R Montfort
Journal:  Protein Sci       Date:  2020-12-10       Impact factor: 6.993

  8 in total

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