Literature DB >> 22907759

Direct interplay among histones, histone chaperones, and a chromatin boundary protein in the control of histone gene expression.

Rachel M Zunder1, Jasper Rine.   

Abstract

In Saccharomyces cerevisiae, the histone chaperone Rtt106 binds newly synthesized histone proteins and mediates their delivery into chromatin during transcription, replication, and silencing. Rtt106 is also recruited to histone gene regulatory regions by the HIR histone chaperone complex to ensure S-phase-specific expression. Here we showed that this Rtt106:HIR complex included Asf1 and histone proteins. Mutations in Rtt106 that reduced histone binding reduced Rtt106 enrichment at histone genes, leading to their increased transcription. Deletion of the chromatin boundary element Yta7 led to increased Rtt106:H3 binding, increased Rtt106 enrichment at histone gene regulatory regions, and decreased histone gene transcription at the HTA1-HTB1 locus. These results suggested a unique regulatory mechanism in which Rtt106 sensed the level of histone proteins to maintain the proper level of histone gene transcription. The role of these histone chaperones and Yta7 differed markedly among the histone gene loci, including the two H3-H4 histone gene pairs. Defects in silencing in rtt106 mutants could be partially accounted for by Rtt106-mediated changes in histone gene repression. These studies suggested that feedback mediated by histone chaperone complexes plays a pivotal role in regulating histone gene transcription.

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Year:  2012        PMID: 22907759      PMCID: PMC3486138          DOI: 10.1128/MCB.00871-12

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  61 in total

1.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

2.  Kinetics of accumulation and depletion of soluble newly synthesized histone in the reciprocal regulation of histone and DNA synthesis.

Authors:  W M Bonner; R S Wu; H T Panusz; C Muneses
Journal:  Biochemistry       Date:  1988-08-23       Impact factor: 3.162

3.  Trans-acting regulatory mutations that alter transcription of Saccharomyces cerevisiae histone genes.

Authors:  M A Osley; D Lycan
Journal:  Mol Cell Biol       Date:  1987-12       Impact factor: 4.272

4.  A role for transcriptional repressors in targeting the yeast Swi/Snf complex.

Authors:  D Dimova; Z Nackerdien; S Furgeson; S Eguchi; M A Osley
Journal:  Mol Cell       Date:  1999-07       Impact factor: 17.970

5.  Replication-dependent marking of DNA by PCNA facilitates CAF-1-coupled inheritance of chromatin.

Authors:  K Shibahara; B Stillman
Journal:  Cell       Date:  1999-02-19       Impact factor: 41.582

6.  Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.

Authors:  M S Longtine; A McKenzie; D J Demarini; N G Shah; A Wach; A Brachat; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

7.  SPT10 and SPT21 are required for transcription of particular histone genes in Saccharomyces cerevisiae.

Authors:  C Dollard; S L Ricupero-Hovasse; G Natsoulis; J D Boeke; F Winston
Journal:  Mol Cell Biol       Date:  1994-08       Impact factor: 4.272

8.  Identification of a new set of cell cycle-regulatory genes that regulate S-phase transcription of histone genes in Saccharomyces cerevisiae.

Authors:  H Xu; U J Kim; T Schuster; M Grunstein
Journal:  Mol Cell Biol       Date:  1992-11       Impact factor: 4.272

9.  Hir proteins are required for position-dependent gene silencing in Saccharomyces cerevisiae in the absence of chromatin assembly factor I.

Authors:  P D Kaufman; J L Cohen; M A Osley
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

10.  Proteomic and genomic characterization of chromatin complexes at a boundary.

Authors:  Alan J Tackett; David J Dilworth; Megan J Davey; Michael O'Donnell; John D Aitchison; Michael P Rout; Brian T Chait
Journal:  J Cell Biol       Date:  2005-04-11       Impact factor: 10.539

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  16 in total

1.  The ATAD2/ANCCA homolog Yta7 cooperates with Scm3HJURP to deposit Cse4CENP-A at the centromere in yeast.

Authors:  Sara Shahnejat-Bushehri; Ann E Ehrenhofer-Murray
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-20       Impact factor: 11.205

2.  Maintenance of nucleosomal balance in cis by conserved AAA-ATPase Yta7.

Authors:  Laura M Lombardi; Matthew D Davis; Jasper Rine
Journal:  Genetics       Date:  2014-11-17       Impact factor: 4.562

3.  Unexpected function of the glucanosyltransferase Gas1 in the DNA damage response linked to histone H3 acetyltransferases in Saccharomyces cerevisiae.

Authors:  Moriah Eustice; Lorraine Pillus
Journal:  Genetics       Date:  2014-02-13       Impact factor: 4.562

4.  Cell cycle-regulated oscillator coordinates core histone gene transcription through histone acetylation.

Authors:  Christoph F Kurat; Jean-Philippe Lambert; Julia Petschnigg; Helena Friesen; Tony Pawson; Adam Rosebrock; Anne-Claude Gingras; Jeffrey Fillingham; Brenda Andrews
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-16       Impact factor: 11.205

Review 5.  Regulation of histone gene transcription in yeast.

Authors:  Christoph F Kurat; Judith Recht; Ernest Radovani; Tanja Durbic; Brenda Andrews; Jeffrey Fillingham
Journal:  Cell Mol Life Sci       Date:  2013-08-23       Impact factor: 9.261

6.  The Candida albicans Histone Acetyltransferase Hat1 Regulates Stress Resistance and Virulence via Distinct Chromatin Assembly Pathways.

Authors:  Michael Tscherner; Florian Zwolanek; Sabrina Jenull; Fritz J Sedlazeck; Andriy Petryshyn; Ingrid E Frohner; John Mavrianos; Neeraj Chauhan; Arndt von Haeseler; Karl Kuchler
Journal:  PLoS Pathog       Date:  2015-10-16       Impact factor: 6.823

7.  Genome-wide mapping of yeast histone chaperone anti-silencing function 1 reveals its role in condensin binding with chromatin.

Authors:  Pooran Singh Dewari; Purnima Bhargava
Journal:  PLoS One       Date:  2014-09-29       Impact factor: 3.240

Review 8.  Lessons from yeast on emerging roles of the ATAD2 protein family in gene regulation and genome organization.

Authors:  Matteo Cattaneo; Yuichi Morozumi; Daniel Perazza; Fayçal Boussouar; Mahya Jamshidikia; Sophie Rousseaux; André Verdel; Saadi Khochbin
Journal:  Mol Cells       Date:  2014-11-05       Impact factor: 5.034

9.  Transcription coordinates histone amounts and genome content.

Authors:  Kora-Lee Claude; Daniela Bureik; Dimitra Chatzitheodoridou; Petia Adarska; Abhyudai Singh; Kurt M Schmoller
Journal:  Nat Commun       Date:  2021-07-09       Impact factor: 14.919

10.  Cell-cycle perturbations suppress the slow-growth defect of spt10Δ mutants in Saccharomyces cerevisiae.

Authors:  Jennifer S Chang; Fred Winston
Journal:  G3 (Bethesda)       Date:  2013-03-01       Impact factor: 3.154

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