BACKGROUND: Numerous epidemiological studies have evaluated the association between TGFBR1 polymorphisms and the risk of cancer, however, the results remain inconclusive. To derive a more precise estimation of the relation, we conducted a comprehensive meta-analysis of all available case-control studies relating the TGFBR1*6A and IVS7+24G>A polymorphisms of the TGFBR1 gene to the risk of cancer. METHODS: Eligible studies were identified by search of electronic databases. Overall and subgroup analyses were performed. Odds ratio (OR) and 95% confidence interval (CI) were applied to assess the associations between TGFBR1*6A and IVS7+24G>A polymorphisms and cancer risk. RESULTS: A total of 35 studies were identified, 32 with 19,767 cases and 18,516 controls for TGFBR1*6A polymorphism and 12 with 4,195 cases and 4,383 controls for IVS7+24G>A polymorphism. For TGFBR1*6A, significantly elevated cancer risk was found in all genetic models (dominant OR = 1.11, 95% CI = 1.04~1.18; recessive: OR = 1.36, 95% CI = 1.11~1.66; additive: OR = 1.13, 95% CI = 1.05~1.20). In subgroup analysis based on cancer type, increased cancer risk was found in ovarian and breast cancer. For IVS7+24G>A, significant correlation with overall cancer risk (dominant: OR = 1.39, 95% CI = 1.15~1.67; recessive: OR = 2.23, 95% CI = 1.26~3.92; additive: OR = 1.43, 95% CI = 1.14~1.80) was found, especially in Asian population. In the subgroup analysis stratified by cancer type, significant association was found in breast and colorectal cancer. CONCLUSIONS: Our investigations demonstrate that TGFBR1*6A and IVS7+24G>A polymorphisms of TGFBR1 are associated with the susceptibility of cancer, and further functional research should be performed to explain the inconsistent results in different ethnicities and cancer types.
BACKGROUND: Numerous epidemiological studies have evaluated the association between TGFBR1 polymorphisms and the risk of cancer, however, the results remain inconclusive. To derive a more precise estimation of the relation, we conducted a comprehensive meta-analysis of all available case-control studies relating the TGFBR1*6A and IVS7+24G>A polymorphisms of the TGFBR1 gene to the risk of cancer. METHODS: Eligible studies were identified by search of electronic databases. Overall and subgroup analyses were performed. Odds ratio (OR) and 95% confidence interval (CI) were applied to assess the associations between TGFBR1*6A and IVS7+24G>A polymorphisms and cancer risk. RESULTS: A total of 35 studies were identified, 32 with 19,767 cases and 18,516 controls for TGFBR1*6A polymorphism and 12 with 4,195 cases and 4,383 controls for IVS7+24G>A polymorphism. For TGFBR1*6A, significantly elevated cancer risk was found in all genetic models (dominant OR = 1.11, 95% CI = 1.04~1.18; recessive: OR = 1.36, 95% CI = 1.11~1.66; additive: OR = 1.13, 95% CI = 1.05~1.20). In subgroup analysis based on cancer type, increased cancer risk was found in ovarian and breast cancer. For IVS7+24G>A, significant correlation with overall cancer risk (dominant: OR = 1.39, 95% CI = 1.15~1.67; recessive: OR = 2.23, 95% CI = 1.26~3.92; additive: OR = 1.43, 95% CI = 1.14~1.80) was found, especially in Asian population. In the subgroup analysis stratified by cancer type, significant association was found in breast and colorectal cancer. CONCLUSIONS: Our investigations demonstrate that TGFBR1*6A and IVS7+24G>A polymorphisms of TGFBR1 are associated with the susceptibility of cancer, and further functional research should be performed to explain the inconsistent results in different ethnicities and cancer types.
Cancer is a disease resulting from complex interactions between environmental and genetic factors [1]–[3]. Genetic factors, including the sequence alterations and organization aberrations of the cellular genome that range from single-nucleotide substitutions to gross chromosome, could modulate several important biological progress and alert susceptibility to cancer consequently.The transforming growth factor-β (TGF-β) signaling pathway has been the focus of extensive research since it was first discovered in 1981 [4], [5]. It has now been well established that this signaling pathway is an important modulator of several biological processes, including cell proliferation, differentiation, migration and apoptosis [6]. Aberrations of the TGF-β signaling pathway are frequently found in many diseases including humancancers in breast, colon, prostate or pancreas [7]–[10]. As overall TGF-β signaling may be determined by genetic polymorphisms in several TGF-β pathway genes, an increasing number of studies have pointed to the effects of TGF-β pathway gene variants on cancer risk. As the central propagator of TGF-β signaling pathway, TGF-β receptor type I (TGFBR1) has been the hot spot of research.TGFBR1 gene locates on chromosome 9q22 [11]. Two commonly studied polymorphisms of TGFBR1 gene are TGFBR1*6A (rs1466445), which results from the deletion of three alanines within a nine-alanine (*9A) stretch in exon 1 [12] and IVS7+24G>A (rs334354), which represents a G to A transversion in the +24 position of the donor splice site in intron 7. Although the functional role of IVS7+24G>A is unclear yet, TGFBR1*6A has been suggested to be responsible for efficiency in mediating TGF-β growth inhibitory signals [13]. Therefore, it is biologically reasonable to hypothesize that polymorphisms of TGFBR1 gene may play a functional role in carcinogenesis.A number of studies have investigated the association between TGFBR1 polymorphisms and cancer risk, but results are somewhat controversial and underpowered. For TGFBR1*6A, a recent meta-analysis in 2010 by Liao et al. [14] found significant association with overall cancer, however, several new papers are further available [15]–[23]. With respect to IVS7+24G>A polymorphism, only 2 meta-analysis on this issue had ever appeared [24], [25]. Zhang [24] found the IVS7+24G>A carriers had a 76% increase of risk of cancer (OR = 1.76, 95% CI = 1.33∼2.34) with only 440 cases and 706 controls in 3 studies. Meanwhile, Zhang et al. [25] limited the investigation on colorectal cancer and found that there was a significantly increased risk for homozygosity A/A carriers compared to heterozygosity and homozygosity of the allele G carriers (OR = 1.71, 95% CI = 1.17∼2.51). To derive a more precise estimation of the relationship between TGFBR1 polymorphisms and cancer risk, we carried out an updated meta-analysis of all available case–control studies relating the TGFBR1*6A and/or IVS7+24G>A polymorphisms of the TGFBR1 gene to the risk of cancer. To the best of our knowledge, this is the most comprehensive meta-analysis regarding the TGFBR1 polymorphisms and cancer risk.The combination of Leukemia, lymphoma and MM (multiple myeloma).This study was excluded from the combined allelic effect and recessive model because of insufficient data on the frequencies of 9A/6A and 6A/6A genotype.NS: not stated, ALL: acute lymphocytic leukemia.
Materials and Methods
Identification and Eligibility of Relevant Studies
This study was performed according to the proposal of Meta-analysis of Observational Studies in Epidemiology group (MOOSE) [26]. A systematic literature search was performed for articles regarding TGFBR1 SNPs associated with cancer risk. The MEDLINE, Embase, and Chinese National Knowledge Infrastructure (CNKI) were used simultaneously, with the combination of terms “TGFBR1 or transforming growth factor receptor 1 or Type I TGF-beta receptor”, “polymorphism or variant or SNP” and “cancer or neoplasm or carcinoma” (up to May 12, 2012). Reference lists of the identified articles were also examined and the literature retrieval was performed in duplication by two independent reviewers (Yong-qiang Wang and Xiao-wei Qi). Studies that were included in the meta-analysis had to meet all of the following criteria: (1) the publication was a case–control study referring to the association between TGFBR1 polymorphisms (TGFBR1*6A and/or IVS7+24G>A) and cancer, (2) the papers must offer the sample size, distribution of alleles, genotypes or other information that can help us infer the results, (3) when multiple publications reported on the same or overlapping data, we used the most recent or largest population as recommended by Little et al. [27], and (4) publication language was confined to English and Chinese.P
h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.Random-effects model was used; otherwise, fixed-effects model was used.P
h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.
Forest plot (random effects model) describing the association of the TGFBR1*6A polymorphism with risk of cancer.
The TGFBR1*6A polymorphism was associated with increased risk of cancer in additive model. Each study is shown by the point estimate of the OR (the size of the square is proportional to the weight of each study) and 95% CI for the OR (extending lines).
Data Extraction
Two investigators (Yong-qiang Wang and Xiao-wei Qi) independently extracted the data from eligible studies selected according to the pre-specified criteria and the results were compared. Disagreements were resolved by discussion or by involving a third reviewer (Qiao-nan Guo). The following information of each study was collected: first author, reference year, name of studies, total number of cases and controls, studied polymorphisms, ethnicity of subjects, source of controls, and distribution of genotypes in case and control groups. For studies with inadequate information, authors were contacted for further support by E-mail if possible.
Forest plot (random effects model) describing the association of the IVS7+24G>A polymorphism with risk of cancer.
The IVS7+24G>A polymorphism was associated with increased cancer risk in additive model.
Statistical Analysis
Meta-analysis was performed as described previously [28], [29]. Hardy-Weinberg equilibrium (HWE) in the controls for each study was calculated using goodness-of fit test (chi-square or Fisher’s exact test). It was considered statistically significant when P<0.05. Studies deviated from HWE were removed.
Funnel plot analysis (recessive model of TGFBR1*6A polymorphism) to detect publication bias.
Each point represents an individual study for the indicated association. LogOR, natural logarithm of OR. Perpendicular line, mean effect size.Crude odds ratios (ORs) with their 95% CIs were used to assess the strength of association between polymorphisms of TGFBR1 and cancer risk. The pooled ORs were performed for dominant model (1∶1+1∶2 vs. 2∶2), recessive model (1∶1 vs. 1∶2+2∶2), additive model (1 vs. 2) respectively. 1 and 2 represent the minor and the major allele respectively. Stratified analysis was also performed by ethnicity and cancer type. Leukemia, lymphoma and MM (multiple myeloma) were merged as hematologic cancer. For ethnicity classification, African, Jews and the ethnicity not stated in original study were merged as others.Heterogeneity assumption was assessed by chi-based Q-test. The heterogeneity was considered statistically significant if P<0.10 [30]. With lacking of heterogeneity among studies, the pooled OR was calculated by the fixed effects model (Mantel–Haenszel) [31]. Otherwise, the random effects model (DerSimonian and Laird) was used [32], [33]. We also calculated the quantity I
2 that represents the percentage of total variation across studies that is a result of heterogeneity rather than chance. Values of less than 25% may be considered “low”, values of about 50% may be considered “moderate”, and values of more than 75% may be considered “high”. A value of 0 (zero) indicates no observed heterogeneity, and larger values show increasing heterogeneity.
Influence analysis of the summary odds ratio coefficients on the association between IVS7+24G>A polymorphism and cancer risk in recessive model.
Results were computed by omitting each study (left column) in turn. Bars, 95% confidence interval.Sensitivity analysis was carried out by removing each study at a time to evaluate the stability of the results. Publication bias was analyzed by performing funnel plots qualitatively, and estimated by Begg’s and Egger’s test quantitatively [34], [35].All statistical analysis was conducted using STATA software (version 11.0; STATA Corporation, College Station, TX). Two-sided P-values<0.05 were considered statistically significant.
Results
Study Characteristics
After comprehensive searching, a total of 186 publications were identified. We reviewed the titles, abstracts and the full texts of all retrieved articles through defined criteria as shown in
. Finally, the pool of eligible studies included 35 studies [12], [15]–[23], [36]–[60], among which 32 with 19,767 cases and 18,516 controls were for TGFBR1*6A polymorphism and 12 with 4,195 cases and 4,383 controls for IVS7+24G>A polymorphism. Each study in one publication was considered as a data set separately for pooling analysis.
and
list the main characteristics of these data sets about these two polymorphisms.
Figure 1
Flow diagram of study identification.
Table 1
Characteristics of case-control studies included in TGFBR1 TGFBR1*6A polymorphism and cancer risk.
First author
Year
Country
Ethnicity
Cancer type
Sample size
Case
Control
(case/control)
9A/9A
6A/9A
6A/6A
9A/9A
6A/9A
6A/6A
Pasche [36]
1999
USA
Mixed
Colon
111/732
90
17
4
654
78
0
Pasche [36]
1999
USA
Mixed
Ovarian
47/732
39
7
1
654
78
0
Pasche [36]
1999
USA
Mixed
Breast
152/732
128
24
0
654
78
0
Pasche [36]
1999
USA
Mixed
Germ cell cancer
56/732
49
5
2
654
78
0
Pasche [36]
1999
USA
Mixed
Lung
94/732
82
11
1
654
78
0
Pasche [36]
1999
USA
Mixed
Prostate
59/732
51
8
0
654
78
0
Pasche [36]
1999
USA
Mixed
Pancreas
14/732
12
2
0
654
78
0
Pasche [36]
1999
USA
Mixed
Bladder
77/732
67
10
0
654
78
0
Pasche [36]a
1999
USA
Mixed
Hematologic
228/732
189
38
1
654
78
0
Pasche [36]
1999
USA
Mixed
Melanoma
10/732
9
1
0
654
78
0
Pasche [36]
1999
Italy
Caucasian
Breast
48/50
39
8
1
38
12
0
Pasche [36]
1999
Italy
Caucasian
Bladder
234/50
199
35
0
38
12
0
Pasche [36]
1999
Italy
Caucasian
Colon
65/50
57
8
0
38
12
0
Chen [37]
1999
USA
NS
Cervical
37/38
29
7
1
34
4
0
Chen [37]
1999
Jamaica
African
Cervical
29/30
26
3
0
27
3
0
van Tilborg [38]
2001
Netherlands
Caucasian
Bladder
146/183
121
25
0
148
32
3
Stefanovska [39]
2001
Macedonia
Caucasian
Colorectal
117/200
108
8
1
179
20
1
Samowitz [40]
2001
USA
Mixed
Colon
250/358
202
46
2
295
58
5
Baxter [41]
2002
UK
Caucasian
Breast
355/248
268
83
4
207
39
2
Baxter [41]
2002
UK
Caucasian
Ovarian
304/248
236
62
6
207
39
2
Chen [12]
2004
USA
Mixed
Renal
88/138
71
15
2
112
25
1
Chen [12]
2004
USA
Mixed
Bladder
63/138
49
13
1
112
25
1
Kaklamani [42]
2004
USA
Mixed
Prostate
442/465
380
59
3
402
62
1
Reiss [43]
2004
USA
Mixed
Breast
98/91
87
11
0
77
14
0
Ellis [43]
2004
USA
Ashkenazi Jews
Colon
767/766
655
108
4
663
100
3
Caldes [43]
2004
Spain
Caucasian
Breast
271/292
214
56
1
250
42
0
Caldes [43]
2004
Spain
Caucasian
Colorectal
235/292
183
50
2
250
42
0
Offit [43]
2004
USA
NS
Breast
462/330
391
67
4
291
38
1
Northwestern [43]
2004
USA
NS
Breast, Ovarian
86/123
74
12
0
105
17
1
Northwestern [43]
2004
USA
NS
Colon
35/123
30
5
0
105
17
1
Jin [44]
2004
Finland
Caucasian
Breast
221/234
177
38
6
171
60
3
Jin [44]
2004
Poland
Caucasian
Breast
170/202
140
28
2
176
26
0
Suarez [45]
2005
USA
Mixed
Prostate
534/488
441
87
6
407
79
2
Spillman [46]
2005
USA
Mixed
Ovarian
578/607
468
100
10
497
104
6
Kaklamani [47]
2005
USA
Mixed
Breast
611/690
515
92
4
612
77
1
Chen [48]
2006
USA
Mixed
Breast
115/130
92
23
0
111
18
1
Feigelson [49]b
2006
USA
Mixed
Breast
481/484
387
94
384
100
You [50]
2007
China
Asian
Lung
252/250
217
35
0
219
31
0
Cox [51]
2007
USA
NS
Breast
1187/1673
968
207
12
1352
302
19
Song [52]
2007
Sweden
Caucasian
Breast
763/852
598
152
13
682
160
10
Skoglund [53]
2007
Sweden
Caucasian
Colorectal
1040/852
827
203
10
682
160
10
Skoglund Lundin [54]
2009
Sweden
Caucasian
Colorectal
213/852
167
42
4
682
160
10
Castillejo [55]
2009
Spain
Caucasian
Bladder
1094/1014
887
199
8
812
191
11
Jakubowska [56]
2010
Poland
Caucasian
Breast
318/290
282
33
3
252
38
0
Jakubowska [56]
2010
Poland
Caucasian
Ovarian
144/279
122
22
0
244
35
0
Colleran [57]
2009
Ireland
Caucasian
Breast
960/958
796
154
10
785
160
13
Dai [15]
2009
German
Caucasian
ALL
458/552
390
61
7
456
88
8
Carvajal-Carmona [16]
2010
UK
Caucasian
Colorectal
913/828
746
159
8
673
145
10
Carvajal-Carmona [16]
2010
UK
Caucasian
Colorectal
933/990
772
152
9
843
140
7
Carvajal-Carmona [16]
2010
UK
Caucasian
Colorectal
1152/1333
938
201
13
1119
200
14
Forsti [17]
2010
Sweden
Caucasian
Colorectal
293/558
218
69
6
435
115
8
Hu [18]
2010
China
Asian
Osteosarcoma
168/168
107
51
10
134
31
3
Abuli [19]
2011
Spain
Caucasian
Colorectal
509/513
427
78
4
405
103
5
Dong [20]
2011
China
Asian
Esophageal
482/584
409
69
4
499
79
6
Guo [21]
2011
China
Asian
Gastric
468/584
393
70
5
499
79
6
Joshi [22]
2011
India
Asian
Breast
167/222
163
4
0
213
9
0
Joshi [22]
2011
India
Asian
Breast
42/169
33
8
1
148
19
2
Martinez-Canto [23]
2012
Spain
Caucasian
Colorectal
521/404
442
72
7
334
67
3
The combination of Leukemia, lymphoma and MM (multiple myeloma).
This study was excluded from the combined allelic effect and recessive model because of insufficient data on the frequencies of 9A/6A and 6A/6A genotype.
NS: not stated, ALL: acute lymphocytic leukemia.
Table 2
Characteristics of case-control studies included in TGFBR1 IVS7+24G>A polymorphism and cancer risk.
First author
Year
Country
Ethnicity
Cancer type
Sample size
Case
Control
(case/control)
GG
GA
AA
GG
GA
AA
Chen [37]
1999
USA, Netherlands
Mixed
Cervical
16/38
9
7
0
24
12
2
Chen [12]
2004
USA
Mixed
Renal
86/113
46
36
4
81
32
0
Chen [12]
2004
USA
Mixed
Bladder
65/113
33
28
4
81
32
0
Chen [12]
2006
USA
Mixed
Breast
223/153
120
92
11
113
37
3
Song [52]
2007
Sweden
Caucasian
Breast
767/853
500
238
267
559
265
29
Castillejo [58]
2009
Spain
Caucasian
Colorectal
504/504
296
178
30
333
156
15
Lundin [54]
2009
Sweden
Caucasian
Colorectal
262/856
135
67
12
559
265
29
Zhang [59]
2009
China
Asian
Colorectal
206/838
60
103
43
245
431
162
Dai [15]
2009
German
Caucasian
ALL
456/551
285
147
24
356
170
25
Forsti [17]
2010
Sweden
Caucasian
Colorectal
308/585
220
68
14
382
179
20
Dong [20]
2011
China
Asian
Esophageal
482/584
296
163
23
402
168
14
Guo [21]
2011
China
Asian
Gastric
468/584
291
155
22
402
168
14
Hu [60]
2011
China
Asian
Osteosarcoma
168/168
100
57
11
115
48
5
Quantitative Synthesis
The main results of this meta-analysis and the heterogeneity test were shown in
and
. With respect to TGFBR1*6A polymorphism, a total of 58 data sets in 32 studies were included in this meta-analysis. Of these data sets, 25 were Caucasian, 6 were Asian, 20 were mixed population and 7 were others. Overall, significantly elevated cancer risk was found in all genetic models (dominant model: OR = 1.11, 95% CI = 1.04∼1.18; recessive model: OR = 1.36, 95% CI = 1.11∼1.66; additive model: OR = 1.13, 95% CI = 1.05∼1.20,
). The heterogeneity was significant in all genetic models except for recessive model (P = 0.34). In the subgroup analysis stratified by ethnicity, significantly increased cancer risk was suggested among mixed ethnicity from US studies (dominant model: OR = 1.15, 95% CI = 1.05∼1.25; recessive model: OR = 1.85, 95% CI = 1.26∼2.72; additive model: OR = 1.22, 95% CI = 1.10∼1.36) but not among Caucasian or Asian population in all genetic models. In the subgroup analysis by cancer type, no significant association with cancer risk was demonstrated in overall population with colorectal, lung, prostate, bladder, hematological and cervical cancer. For ovarian cancer, significantly increased risk was observed in recessive model (OR = 2.30, 95% CI = 1.01∼5.22) and additive model (OR = 1.25, 95% CI = 1.02∼1.52). With respect to breast cancer, significantly increased risk was found only in additive model (OR = 1.15, 95% CI = 1.01∼1.31).
Table 3
Pooled analysis of association of TGFBR1 TGFBR1*6A (rs1466445) and cancer risk.
Dominant model
Recessive model
Additive model
(6A6A+6A9A) VS 9A9A
6A6A VS (6A9A+9A9A)a
6A VS 9A
N
Case/Control
OR
Ph
I2
OR
Ph
I2
OR
Ph
I2
Total
58
19767/18516
1.105 (1.035∼1.181)
0.024
28.7%
1.358 (1.113∼1.657)
0.341
6.9%
1.125 (1.053∼1.201)
0.006
35.1%
Cancer tpye
Colorectal
15
7154/8851
1.076 (0.956∼1.212)
0.048
41.2%
1.222 (0.887∼1.683)
0.523
0.0%
1.085 (0.963∼1.222)
0.016
49.4%
Ovarian
4
1071/1866
1.218 (0.983∼1.510)
0.526
0.0%
2.296 (1.011∼5.218)
0.160
45.0%
1.246 (1.022∼1.520)
0.435
0.0%
Breast
17
6421/7647
1.122 (0.978∼1.287)
0.023
45.2%
1.332 (0.921∼1.925)
0.753
0.0%
1.151 (1.008∼1.314)
0.034
43.1%
Lung
2
346/982
1.173 (0.782∼1.759)
0.861
0.0%
23.503 (0.951∼581.117)
1.203 (0.817∼1.769)
0.697
0.0%
Prostate
3
1035/1685
1.073 (0.848∼1.358)
0.865
0.0%
2.892 (0.780∼10.717)
0.922
0.0%
1.105 (0.885∼1.380)
0.909
0.0%
Bladder
5
1461/2117
0.936 (0.780∼1.122)
0.536
0.0%
0.633 (0.281∼1.426)
0.472
0.0%
0.924 (0.781∼1.095)
0.512
0.0%
Hematologic
2
686/1284
1.185 (0.575∼2.440)
0.007
86.2%
1.331 (0.518∼3.423)
0.197
40.0%
1.197 (0.609∼2.353)
0.007
86.1%
Cervical
2
66/68
1.732 (0.619∼4.849)
0.454
0.0%
3.164 (0.125∼80.193)
1.822 (0.682∼4.862)
0.401
0.0%
Ethnicity
Mixed
20
4108/4183
1.145 (1.049∼1.251)
0.640
0.0%
2.908 (1.735∼4.877)
0.072
39.3%
1.281 (1.149∼1.428)
0.552
0.0%
Caucasian
25
11477/9980
1.037 (0.941∼1.142)
0.011
43.8%
1.159 (0.901∼1.491)
0.901
0.0%
1.045 (0.957∼1.141)
0.017
41.4%
Others
7
2603/2960
1.208 (1.083∼1.347)
0.668
0.0%
1.086 (0.611∼1.932)
0.876
0.0%
1.038 (0.908∼1.186)
0.529
0.0%
Asian
6
1579/1393
1.272 (0.951∼1.702)
0.089
47.7%
1.489 (0.767∼2.891)
0.403
0.0%
1.265 (0.946∼1.692)
0.052
54.4%
Publication bias test
Begg’s test
P = 0.537
P = 0.001
P = 0.518
Egger’s test
P = 0.256
P = 0.000
P = 0.129
P
h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.
I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.
Random-effects model was used; otherwise, fixed-effects model was used.
Table 4
Pooled analysis of association of IVS7+24G>A (rs334354) and cancer risk.
Dominant model
Recessive model
Additive model
(AA+GA) VS GG
AA VS (GA+GG)
A VS G
N
Case/Control
OR
Ph
I2
OR
Ph
I2
OR
Ph
I2
Total
13
4195/4383
1.385 (1.146∼1.673)
0.000
75.9%
2.225 (1.263∼3.921)
0.000
86.0%
1.432 (1.140∼1.798)
0.000
89.1%
Cancer type
Colorectal
4
1226/2776
1.030 (0.779∼1.362)
0.016
71.0%
1.379 (1.035∼1.837)
0.354
7.7%
1.081 (0.876∼1.333)
0.025
68.0%
Breast
2
1228/1006
1.989 (1.673∼2.365)
0.345
0.0%
5.959 (1.590∼22.331)
0.046
74.9%
2.536 (2.091∼3.076)
0.256
22.3%
Ethnicity
Caucasian
5
2481/2489
1.194 (0.854∼1.669)
0.000
88.2%
2.282 (0.848∼6.143)
0.000
93.2%
1.310 (0.833∼2.059)
0.000
95.5%
Asian
4
1324/1590
1.296 (1.116∼1.505)
0.410
0.0%
1.578 (1.065∼2.337)
0.205
34.6%
1.267 (1.086∼1.478)
0.190
37.0%
Mixed
4
390/304
2.283 (1.694∼3.082)
0.820
0.0%
3.481 (0.972∼12.491)
0.292
19.6%
2.052 (1.580∼2.654)
0.586
0.0%
Publication bias test
Begg’s test
P = 1.000
P = 0.246
P = 0.360
Egger’s test
P = 0.867
P = 0.889
P = 0.579
P
h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.
I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.
Figure 2
Forest plot (random effects model) describing the association of the TGFBR1*6A polymorphism with risk of cancer.
The TGFBR1*6A polymorphism was associated with increased risk of cancer in additive model. Each study is shown by the point estimate of the OR (the size of the square is proportional to the weight of each study) and 95% CI for the OR (extending lines).
With respect to IVS7+24G>A polymorphism, a total of 12 studies with 13 data sets were included. Of these data sets, 5 were European, 4 were Asian and 4 were from USA with mixed ethnicity. Similar to TGFBR1*6A polymorphism, significantly elevated cancer risk was associated with IVS7+24G>A in all genetic models (dominant model: OR = 1.39, 95% CI = 1.15∼1.67; recessive model: OR = 2.23, 95% CI = 1.26∼3.92; additive model: OR = 1.43, 95% CI = 1.14∼1.80,
). The heterogeneity was significant in all genetic models (P<0.1). In the subgroup analysis by ethnicity, significantly increased risk was found in Asian population (dominant model: OR = 1.30, 95% CI = 1.12∼1.51; recessive model: OR = 1.58, 95% CI = 1.07∼2.34; additive model: OR = 1.27, 95% CI = 1.09∼1.48) but not in Caucasian in all genetic models. In the subgroup analysis stratified by cancer type, significantly increased risk was detected in all genetic models in breast cancer (dominant model: OR = 1.99, 95% CI = 1.67∼2.37; recessive model: OR = 5.96, 95% CI = 1.59∼22.33; additive model: OR = 2.54, 95% CI = 2.10∼3.08). With respect to colorectal cancer, significant association was found only in recessive model (OR = 1.38; 95% CI = 1.04∼1.84).
Figure 3
Forest plot (random effects model) describing the association of the IVS7+24G>A polymorphism with risk of cancer.
The IVS7+24G>A polymorphism was associated with increased cancer risk in additive model.
Publication Bias and Sensitivity Analysis
The shapes of the funnel plots did not reveal any evidence of obvious asymmetry for TGFBR1*6A polymorphism in all genetic models, except for recessive model (
). The Begg’s and Egger’s test also suggested the same results (dominant model: P = 0.54, P0.26; recessive model: P
= 0.00 (7.13×10−4), P = 0.00(2.23×10−5); additive model: P = 0.52, P0.13). For IVS7+24G>A polymorphism, publication bias was not ruled out not only through visual inspection of asymmetry in funnel plots but also through statistical evidence of the Begg’s and Egger’s test (dominant model: P = 1.00, P0.87; recessive model: P
= 0.25, P = 0.89; additive model: P = 0.36, P0.58).
Figure 4
Funnel plot analysis (recessive model of TGFBR1*6A polymorphism) to detect publication bias.
Each point represents an individual study for the indicated association. LogOR, natural logarithm of OR. Perpendicular line, mean effect size.
Sensitivity analysis, which was performed to assess the publication bias and the influence of each individual study on the pooled OR by sequential removal of individual studies, showed that Song’s study [52] was far from the midcourt line for IVS7+24G>A polymorphism in recessive model (
). However, the heterogeneity and the pooled OR were not influenced when this article was excluded (data not shown), which indicated that our results were statistically stable.
Figure 5
Influence analysis of the summary odds ratio coefficients on the association between IVS7+24G>A polymorphism and cancer risk in recessive model.
Results were computed by omitting each study (left column) in turn. Bars, 95% confidence interval.
Discussion
In the present study, we explored the association between the TGFBR1*6A and IVS7+24G>A polymorphisms and cancer risk, involving 35 eligible case–control studies. For TGFBR1*6A polymorphism, 19,767 cases and 18,516 controls were included. We found that individuals with the TGFBR1*6A allele showed an increased risk of cancer. In the stratified analysis by cancer type, significantly elevated risks were more pronounced among ovarian cancer and breast cancer. However, no significant correlation of polymorphism TGFBR1*6A with colorectal cancer was found. These findings, though including the latest publications, were consistent with a recent meta-analysis study conducted by Liao et al. [14]. While according to Colleran’s study [57], TGFBR1*6A is not associated with breast cancer. This discrepancy may be due to data missing of some important studies, which was exclusively elaborated by Zhang et al. [61]. Another meta-analysis performed by Zhang et al. [25] found TGFBR1*6A is statistically associated with an increased colorectal cancer risk in dominant model. One factor that may contribute to the differences is that we excluded Castillejo’s study [62] for HWE deviation and included two latest studies [22], [23]. Moreover, a significantly increased risk was found among mixed ethnicity from US studies but not among Caucasian and Asian, and this was the first study evaluating the relation between TGFBR1 polymorphism and overall cancer risk among different populations.With respect to IVS7+24G>A polymorphism, a previous meta-analysis conducted by Zhang [24] with only 440 cases and 706 controls found that the IVS7+24G>A carriers had a 76% increase of cancer risk. Another meta-analysis conducted by Zhang et al. [25] found that IVS7+24G>A polymorphism had significant effects on colorectal cancer risk in recessive model. However, there were defects in their meta-analysis [25] for mistaking adenoma cases of Lundin’s study [54] as colorectal cancer cases. For the current meta-analysis, 4,195 cases and 4,383 controls were included. Significant correlation of IVS7+24G>A polymorphism with cancer risk was found in all genetic models. When coming to colorectal cancer, the results were in line with Zhang et al [25]. Besides, we also found strong association between IVS7+24G>A polymorphism and breast cancer risk, indicating that potentially functional IVS7+24G>A polymorphism may play a low penetrance role in development of breast cancer. Significant association was found in Asian but not in Caucasian, suggesting a possible role of ethnic differences in genetic backgrounds and the environment they lived in.To some extent, limitations of this meta-analysis should be addressed. First, the sample sizes of several included studies [12], [37] were rather small and not adequate enough to detect the possible risk for TGFBR1 polymorphisms. Second, cancer is a complex disease with multifactorial etiology. The gene–environment and gene–gene interactions should be further evaluated. Third, haplotype association analysis is the most powerful method to explore the intrinsic effects of gene, but most of the literatures identified in our present meta-analysis were focused on the relation between the two TGFBR1 SNPs and tumor susceptibility, which made it difficult to investigate the TGFBR1 haplotype effects on carcinogenesis. Last but not least, most of US studies were mixed ethnicity, which made it hard to obtain the effects of specific ethnicity on the associations between TGFBR1 polymorphisms and cancer risk.In summary, this meta-analysis provided evidence that the TGFBR1*9A/6A polymorphism is associated with overall cancer susceptibility and seem to be more susceptible to ovarian and breast cancer. Meanwhile, IVS7+24G>A polymorphism is also associated with increased overall cancer risk especially in colorectal and breast cancer. More well-designed epidemiological studies on specific ethnicity and cancer types, which were not well covered by existing studies, will be necessary to validate the findings identified in the current meta-analysis. Further studies regarding other SNPs (or haplotypes) in the TGFBR1 gene and cancer risk are also encouraged to better understand the role of TGFBR1 in carcinogenesis.
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