Literature DB >> 22905183

Association between TGFBR1 polymorphisms and cancer risk: a meta-analysis of 35 case-control studies.

Yong-qiang Wang1, Xiao-wei Qi, Fan Wang, Jun Jiang, Qiao-nan Guo.   

Abstract

BACKGROUND: Numerous epidemiological studies have evaluated the association between TGFBR1 polymorphisms and the risk of cancer, however, the results remain inconclusive. To derive a more precise estimation of the relation, we conducted a comprehensive meta-analysis of all available case-control studies relating the TGFBR1*6A and IVS7+24G>A polymorphisms of the TGFBR1 gene to the risk of cancer.
METHODS: Eligible studies were identified by search of electronic databases. Overall and subgroup analyses were performed. Odds ratio (OR) and 95% confidence interval (CI) were applied to assess the associations between TGFBR1*6A and IVS7+24G>A polymorphisms and cancer risk.
RESULTS: A total of 35 studies were identified, 32 with 19,767 cases and 18,516 controls for TGFBR1*6A polymorphism and 12 with 4,195 cases and 4,383 controls for IVS7+24G>A polymorphism. For TGFBR1*6A, significantly elevated cancer risk was found in all genetic models (dominant OR = 1.11, 95% CI = 1.04~1.18; recessive: OR = 1.36, 95% CI = 1.11~1.66; additive: OR = 1.13, 95% CI = 1.05~1.20). In subgroup analysis based on cancer type, increased cancer risk was found in ovarian and breast cancer. For IVS7+24G>A, significant correlation with overall cancer risk (dominant: OR = 1.39, 95% CI = 1.15~1.67; recessive: OR = 2.23, 95% CI = 1.26~3.92; additive: OR = 1.43, 95% CI = 1.14~1.80) was found, especially in Asian population. In the subgroup analysis stratified by cancer type, significant association was found in breast and colorectal cancer.
CONCLUSIONS: Our investigations demonstrate that TGFBR1*6A and IVS7+24G>A polymorphisms of TGFBR1 are associated with the susceptibility of cancer, and further functional research should be performed to explain the inconsistent results in different ethnicities and cancer types.

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Year:  2012        PMID: 22905183      PMCID: PMC3414489          DOI: 10.1371/journal.pone.0042899

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


Introduction

Cancer is a disease resulting from complex interactions between environmental and genetic factors [1]–[3]. Genetic factors, including the sequence alterations and organization aberrations of the cellular genome that range from single-nucleotide substitutions to gross chromosome, could modulate several important biological progress and alert susceptibility to cancer consequently. The transforming growth factor-β (TGF-β) signaling pathway has been the focus of extensive research since it was first discovered in 1981 [4], [5]. It has now been well established that this signaling pathway is an important modulator of several biological processes, including cell proliferation, differentiation, migration and apoptosis [6]. Aberrations of the TGF-β signaling pathway are frequently found in many diseases including human cancers in breast, colon, prostate or pancreas [7]–[10]. As overall TGF-β signaling may be determined by genetic polymorphisms in several TGF-β pathway genes, an increasing number of studies have pointed to the effects of TGF-β pathway gene variants on cancer risk. As the central propagator of TGF-β signaling pathway, TGF-β receptor type I (TGFBR1) has been the hot spot of research. TGFBR1 gene locates on chromosome 9q22 [11]. Two commonly studied polymorphisms of TGFBR1 gene are TGFBR1*6A (rs1466445), which results from the deletion of three alanines within a nine-alanine (*9A) stretch in exon 1 [12] and IVS7+24G>A (rs334354), which represents a G to A transversion in the +24 position of the donor splice site in intron 7. Although the functional role of IVS7+24G>A is unclear yet, TGFBR1*6A has been suggested to be responsible for efficiency in mediating TGF-β growth inhibitory signals [13]. Therefore, it is biologically reasonable to hypothesize that polymorphisms of TGFBR1 gene may play a functional role in carcinogenesis. A number of studies have investigated the association between TGFBR1 polymorphisms and cancer risk, but results are somewhat controversial and underpowered. For TGFBR1*6A, a recent meta-analysis in 2010 by Liao et al. [14] found significant association with overall cancer, however, several new papers are further available [15]–[23]. With respect to IVS7+24G>A polymorphism, only 2 meta-analysis on this issue had ever appeared [24], [25]. Zhang [24] found the IVS7+24G>A carriers had a 76% increase of risk of cancer (OR = 1.76, 95% CI = 1.33∼2.34) with only 440 cases and 706 controls in 3 studies. Meanwhile, Zhang et al. [25] limited the investigation on colorectal cancer and found that there was a significantly increased risk for homozygosity A/A carriers compared to heterozygosity and homozygosity of the allele G carriers (OR = 1.71, 95% CI = 1.17∼2.51). To derive a more precise estimation of the relationship between TGFBR1 polymorphisms and cancer risk, we carried out an updated meta-analysis of all available case–control studies relating the TGFBR1*6A and/or IVS7+24G>A polymorphisms of the TGFBR1 gene to the risk of cancer. To the best of our knowledge, this is the most comprehensive meta-analysis regarding the TGFBR1 polymorphisms and cancer risk. The combination of Leukemia, lymphoma and MM (multiple myeloma). This study was excluded from the combined allelic effect and recessive model because of insufficient data on the frequencies of 9A/6A and 6A/6A genotype. NS: not stated, ALL: acute lymphocytic leukemia.

Materials and Methods

Identification and Eligibility of Relevant Studies

This study was performed according to the proposal of Meta-analysis of Observational Studies in Epidemiology group (MOOSE) [26]. A systematic literature search was performed for articles regarding TGFBR1 SNPs associated with cancer risk. The MEDLINE, Embase, and Chinese National Knowledge Infrastructure (CNKI) were used simultaneously, with the combination of terms “TGFBR1 or transforming growth factor receptor 1 or Type I TGF-beta receptor”, “polymorphism or variant or SNP” and “cancer or neoplasm or carcinoma” (up to May 12, 2012). Reference lists of the identified articles were also examined and the literature retrieval was performed in duplication by two independent reviewers (Yong-qiang Wang and Xiao-wei Qi). Studies that were included in the meta-analysis had to meet all of the following criteria: (1) the publication was a case–control study referring to the association between TGFBR1 polymorphisms (TGFBR1*6A and/or IVS7+24G>A) and cancer, (2) the papers must offer the sample size, distribution of alleles, genotypes or other information that can help us infer the results, (3) when multiple publications reported on the same or overlapping data, we used the most recent or largest population as recommended by Little et al. [27], and (4) publication language was confined to English and Chinese. P h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets. I : the percentage of total variation across studies that is a result of heterogeneity rather than chance. Random-effects model was used; otherwise, fixed-effects model was used. P h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets. I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.

Forest plot (random effects model) describing the association of the TGFBR1*6A polymorphism with risk of cancer.

The TGFBR1*6A polymorphism was associated with increased risk of cancer in additive model. Each study is shown by the point estimate of the OR (the size of the square is proportional to the weight of each study) and 95% CI for the OR (extending lines).

Data Extraction

Two investigators (Yong-qiang Wang and Xiao-wei Qi) independently extracted the data from eligible studies selected according to the pre-specified criteria and the results were compared. Disagreements were resolved by discussion or by involving a third reviewer (Qiao-nan Guo). The following information of each study was collected: first author, reference year, name of studies, total number of cases and controls, studied polymorphisms, ethnicity of subjects, source of controls, and distribution of genotypes in case and control groups. For studies with inadequate information, authors were contacted for further support by E-mail if possible.

Forest plot (random effects model) describing the association of the IVS7+24G>A polymorphism with risk of cancer.

The IVS7+24G>A polymorphism was associated with increased cancer risk in additive model.

Statistical Analysis

Meta-analysis was performed as described previously [28], [29]. Hardy-Weinberg equilibrium (HWE) in the controls for each study was calculated using goodness-of fit test (chi-square or Fisher’s exact test). It was considered statistically significant when P<0.05. Studies deviated from HWE were removed.

Funnel plot analysis (recessive model of TGFBR1*6A polymorphism) to detect publication bias.

Each point represents an individual study for the indicated association. LogOR, natural logarithm of OR. Perpendicular line, mean effect size. Crude odds ratios (ORs) with their 95% CIs were used to assess the strength of association between polymorphisms of TGFBR1 and cancer risk. The pooled ORs were performed for dominant model (1∶1+1∶2 vs. 2∶2), recessive model (1∶1 vs. 1∶2+2∶2), additive model (1 vs. 2) respectively. 1 and 2 represent the minor and the major allele respectively. Stratified analysis was also performed by ethnicity and cancer type. Leukemia, lymphoma and MM (multiple myeloma) were merged as hematologic cancer. For ethnicity classification, African, Jews and the ethnicity not stated in original study were merged as others. Heterogeneity assumption was assessed by chi-based Q-test. The heterogeneity was considered statistically significant if P<0.10 [30]. With lacking of heterogeneity among studies, the pooled OR was calculated by the fixed effects model (Mantel–Haenszel) [31]. Otherwise, the random effects model (DerSimonian and Laird) was used [32], [33]. We also calculated the quantity I 2 that represents the percentage of total variation across studies that is a result of heterogeneity rather than chance. Values of less than 25% may be considered “low”, values of about 50% may be considered “moderate”, and values of more than 75% may be considered “high”. A value of 0 (zero) indicates no observed heterogeneity, and larger values show increasing heterogeneity.

Influence analysis of the summary odds ratio coefficients on the association between IVS7+24G>A polymorphism and cancer risk in recessive model.

Results were computed by omitting each study (left column) in turn. Bars, 95% confidence interval. Sensitivity analysis was carried out by removing each study at a time to evaluate the stability of the results. Publication bias was analyzed by performing funnel plots qualitatively, and estimated by Begg’s and Egger’s test quantitatively [34], [35]. All statistical analysis was conducted using STATA software (version 11.0; STATA Corporation, College Station, TX). Two-sided P-values<0.05 were considered statistically significant.

Results

Study Characteristics

After comprehensive searching, a total of 186 publications were identified. We reviewed the titles, abstracts and the full texts of all retrieved articles through defined criteria as shown in . Finally, the pool of eligible studies included 35 studies [12], [15]–[23], [36]–[60], among which 32 with 19,767 cases and 18,516 controls were for TGFBR1*6A polymorphism and 12 with 4,195 cases and 4,383 controls for IVS7+24G>A polymorphism. Each study in one publication was considered as a data set separately for pooling analysis. and list the main characteristics of these data sets about these two polymorphisms.
Figure 1

Flow diagram of study identification.

Table 1

Characteristics of case-control studies included in TGFBR1 TGFBR1*6A polymorphism and cancer risk.

First authorYearCountryEthnicityCancer typeSample sizeCaseControl
(case/control) 9A/9A 6A/9A 6A/6A 9A/9A 6A/9A 6A/6A
Pasche [36] 1999USAMixedColon111/73290174654780
Pasche [36] 1999USAMixedOvarian47/7323971654780
Pasche [36] 1999USAMixedBreast152/732128240654780
Pasche [36] 1999USAMixedGerm cell cancer56/7324952654780
Pasche [36] 1999USAMixedLung94/73282111654780
Pasche [36] 1999USAMixedProstate59/7325180654780
Pasche [36] 1999USAMixedPancreas14/7321220654780
Pasche [36] 1999USAMixedBladder77/73267100654780
Pasche [36] a 1999USAMixedHematologic228/732189381654780
Pasche [36] 1999USAMixedMelanoma10/732910654780
Pasche [36] 1999ItalyCaucasianBreast48/50398138120
Pasche [36] 1999ItalyCaucasianBladder234/5019935038120
Pasche [36] 1999ItalyCaucasianColon65/50578038120
Chen [37] 1999USANSCervical37/3829713440
Chen [37] 1999JamaicaAfricanCervical29/3026302730
van Tilborg [38] 2001NetherlandsCaucasianBladder146/183121250148323
Stefanovska [39] 2001MacedoniaCaucasianColorectal117/20010881179201
Samowitz [40] 2001USAMixedColon250/358202462295585
Baxter [41] 2002UKCaucasianBreast355/248268834207392
Baxter [41] 2002UKCaucasianOvarian304/248236626207392
Chen [12] 2004USAMixedRenal88/13871152112251
Chen [12] 2004USAMixedBladder63/13849131112251
Kaklamani [42] 2004USAMixedProstate442/465380593402621
Reiss [43] 2004USAMixedBreast98/918711077140
Ellis [43] 2004USAAshkenazi JewsColon767/76665510846631003
Caldes [43] 2004SpainCaucasianBreast271/292214561250420
Caldes [43] 2004SpainCaucasianColorectal235/292183502250420
Offit [43] 2004USANSBreast462/330391674291381
Northwestern [43] 2004USANSBreast, Ovarian86/12374120105171
Northwestern [43] 2004USANSColon35/1233050105171
Jin [44] 2004FinlandCaucasianBreast221/234177386171603
Jin [44] 2004PolandCaucasianBreast170/202140282176260
Suarez [45] 2005USAMixedProstate534/488441876407792
Spillman [46] 2005USAMixedOvarian578/607468100104971046
Kaklamani [47] 2005USAMixedBreast611/690515924612771
Chen [48] 2006USAMixedBreast115/13092230111181
Feigelson [49] b 2006USAMixedBreast481/48438794384100
You [50] 2007ChinaAsianLung252/250217350219310
Cox [51] 2007USANSBreast1187/167396820712135230219
Song [52] 2007SwedenCaucasianBreast763/8525981521368216010
Skoglund [53] 2007SwedenCaucasianColorectal1040/8528272031068216010
Skoglund Lundin [54] 2009SwedenCaucasianColorectal213/85216742468216010
Castillejo [55] 2009SpainCaucasianBladder1094/1014887199881219111
Jakubowska [56] 2010PolandCaucasianBreast318/290282333252380
Jakubowska [56] 2010PolandCaucasianOvarian144/279122220244350
Colleran [57] 2009IrelandCaucasianBreast960/9587961541078516013
Dai [15] 2009GermanCaucasianALL458/552390617456888
Carvajal-Carmona [16] 2010UKCaucasianColorectal913/828746159867314510
Carvajal-Carmona [16] 2010UKCaucasianColorectal933/99077215298431407
Carvajal-Carmona [16] 2010UKCaucasianColorectal1152/133393820113111920014
Forsti [17] 2010SwedenCaucasianColorectal293/5582186964351158
Hu [18] 2010ChinaAsianOsteosarcoma168/1681075110134313
Abuli [19] 2011SpainCaucasianColorectal509/5134277844051035
Dong [20] 2011ChinaAsianEsophageal482/584409694499796
Guo [21] 2011ChinaAsianGastric468/584393705499796
Joshi [22] 2011IndiaAsianBreast167/2221634021390
Joshi [22] 2011IndiaAsianBreast42/1693381148192
Martinez-Canto [23] 2012SpainCaucasianColorectal521/404442727334673

The combination of Leukemia, lymphoma and MM (multiple myeloma).

This study was excluded from the combined allelic effect and recessive model because of insufficient data on the frequencies of 9A/6A and 6A/6A genotype.

NS: not stated, ALL: acute lymphocytic leukemia.

Table 2

Characteristics of case-control studies included in TGFBR1 IVS7+24G>A polymorphism and cancer risk.

First authorYearCountryEthnicityCancer typeSample sizeCaseControl
(case/control)GGGAAAGGGAAA
Chen [37] 1999USA, NetherlandsMixedCervical16/3897024122
Chen [12] 2004USAMixedRenal86/1134636481320
Chen [12] 2004USAMixedBladder65/1133328481320
Chen [12] 2006USAMixedBreast223/1531209211113373
Song [52] 2007SwedenCaucasianBreast767/85350023826755926529
Castillejo [58] 2009SpainCaucasianColorectal504/5042961783033315615
Lundin [54] 2009SwedenCaucasianColorectal262/856135671255926529
Zhang [59] 2009ChinaAsianColorectal206/8386010343245431162
Dai [15] 2009GermanCaucasianALL456/5512851472435617025
Forsti [17] 2010SwedenCaucasianColorectal308/585220681438217920
Dong [20] 2011ChinaAsianEsophageal482/5842961632340216814
Guo [21] 2011ChinaAsianGastric468/5842911552240216814
Hu [60] 2011ChinaAsianOsteosarcoma168/1681005711115485

Quantitative Synthesis

The main results of this meta-analysis and the heterogeneity test were shown in and . With respect to TGFBR1*6A polymorphism, a total of 58 data sets in 32 studies were included in this meta-analysis. Of these data sets, 25 were Caucasian, 6 were Asian, 20 were mixed population and 7 were others. Overall, significantly elevated cancer risk was found in all genetic models (dominant model: OR = 1.11, 95% CI = 1.04∼1.18; recessive model: OR = 1.36, 95% CI = 1.11∼1.66; additive model: OR = 1.13, 95% CI = 1.05∼1.20, ). The heterogeneity was significant in all genetic models except for recessive model (P = 0.34). In the subgroup analysis stratified by ethnicity, significantly increased cancer risk was suggested among mixed ethnicity from US studies (dominant model: OR = 1.15, 95% CI = 1.05∼1.25; recessive model: OR = 1.85, 95% CI = 1.26∼2.72; additive model: OR = 1.22, 95% CI = 1.10∼1.36) but not among Caucasian or Asian population in all genetic models. In the subgroup analysis by cancer type, no significant association with cancer risk was demonstrated in overall population with colorectal, lung, prostate, bladder, hematological and cervical cancer. For ovarian cancer, significantly increased risk was observed in recessive model (OR = 2.30, 95% CI = 1.01∼5.22) and additive model (OR = 1.25, 95% CI = 1.02∼1.52). With respect to breast cancer, significantly increased risk was found only in additive model (OR = 1.15, 95% CI = 1.01∼1.31).
Table 3

Pooled analysis of association of TGFBR1 TGFBR1*6A (rs1466445) and cancer risk.

Dominant modelRecessive modelAdditive model
(6A6A+6A9A) VS 9A9A6A6A VS (6A9A+9A9A)a 6A VS 9A
NCase/ControlOR P h I 2 OR P h I 2 OR P h I 2
Total 5819767/18516 1.105 (1.0351.181) 0.02428.7% 1.358 (1.1131.657) 0.3416.9% 1.125 (1.0531.201) 0.00635.1%
Cancer tpye
Colorectal157154/88511.076 (0.956∼1.212)0.04841.2%1.222 (0.887∼1.683)0.5230.0%1.085 (0.963∼1.222)0.01649.4%
Ovarian41071/18661.218 (0.983∼1.510)0.5260.0% 2.296 (1.0115.218) 0.16045.0% 1.246 (1.0221.520) 0.4350.0%
Breast176421/76471.122 (0.978∼1.287)0.02345.2%1.332 (0.921∼1.925)0.7530.0% 1.151 (1.0081.314) 0.03443.1%
Lung2346/9821.173 (0.782∼1.759)0.8610.0%23.503 (0.951∼581.117)1.203 (0.817∼1.769)0.6970.0%
Prostate31035/16851.073 (0.848∼1.358)0.8650.0%2.892 (0.780∼10.717)0.9220.0%1.105 (0.885∼1.380)0.9090.0%
Bladder51461/21170.936 (0.780∼1.122)0.5360.0%0.633 (0.281∼1.426)0.4720.0%0.924 (0.781∼1.095)0.5120.0%
Hematologic2686/12841.185 (0.575∼2.440)0.00786.2%1.331 (0.518∼3.423)0.19740.0%1.197 (0.609∼2.353)0.00786.1%
Cervical266/681.732 (0.619∼4.849)0.4540.0%3.164 (0.125∼80.193)1.822 (0.682∼4.862)0.4010.0%
Ethnicity
Mixed204108/4183 1.145 (1.0491.251) 0.6400.0% 2.908 (1.7354.877) 0.07239.3% 1.281 (1.1491.428) 0.5520.0%
Caucasian2511477/99801.037 (0.941∼1.142)0.01143.8%1.159 (0.901∼1.491)0.9010.0%1.045 (0.957∼1.141)0.01741.4%
Others72603/2960 1.208 (1.0831.347) 0.6680.0%1.086 (0.611∼1.932)0.8760.0%1.038 (0.908∼1.186)0.5290.0%
Asian61579/13931.272 (0.951∼1.702)0.08947.7%1.489 (0.767∼2.891)0.4030.0%1.265 (0.946∼1.692)0.05254.4%
Publication bias test
Begg’s test P = 0.537 P = 0.001 P = 0.518
Egger’s test P = 0.256 P = 0.000 P = 0.129

P h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.

I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.

Random-effects model was used; otherwise, fixed-effects model was used.

Table 4

Pooled analysis of association of IVS7+24G>A (rs334354) and cancer risk.

Dominant modelRecessive modelAdditive model
(AA+GA) VS GGAA VS (GA+GG)A VS G
NCase/ControlOR P h I 2 OR P h I 2 OR P h I 2
Total 134195/4383 1.385 (1.1461.673) 0.00075.9% 2.225 (1.2633.921) 0.00086.0% 1.432 (1.1401.798) 0.00089.1%
Cancer type
Colorectal41226/27761.030 (0.779∼1.362)0.01671.0% 1.379 (1.0351.837) 0.3547.7%1.081 (0.876∼1.333)0.02568.0%
Breast21228/1006 1.989 (1.6732.365) 0.3450.0% 5.959 (1.59022.331) 0.04674.9% 2.536 (2.0913.076) 0.25622.3%
Ethnicity
Caucasian52481/24891.194 (0.854∼1.669)0.00088.2%2.282 (0.848∼6.143)0.00093.2%1.310 (0.833∼2.059)0.00095.5%
Asian41324/1590 1.296 (1.1161.505) 0.4100.0% 1.578 (1.0652.337) 0.20534.6% 1.267 (1.0861.478) 0.19037.0%
Mixed4390/304 2.283 (1.6943.082) 0.8200.0%3.481 (0.972∼12.491)0.29219.6% 2.052 (1.5802.654) 0.5860.0%
Publication bias test
Begg’s test P = 1.000 P = 0.246 P = 0.360
Egger’s test P = 0.867 P = 0.889 P = 0.579

P h: test for heterogeneity, OR: odds ratio, CI: confidence interval, N: number of data sets.

I : the percentage of total variation across studies that is a result of heterogeneity rather than chance.

Figure 2

Forest plot (random effects model) describing the association of the TGFBR1*6A polymorphism with risk of cancer.

The TGFBR1*6A polymorphism was associated with increased risk of cancer in additive model. Each study is shown by the point estimate of the OR (the size of the square is proportional to the weight of each study) and 95% CI for the OR (extending lines).

With respect to IVS7+24G>A polymorphism, a total of 12 studies with 13 data sets were included. Of these data sets, 5 were European, 4 were Asian and 4 were from USA with mixed ethnicity. Similar to TGFBR1*6A polymorphism, significantly elevated cancer risk was associated with IVS7+24G>A in all genetic models (dominant model: OR = 1.39, 95% CI = 1.15∼1.67; recessive model: OR = 2.23, 95% CI = 1.26∼3.92; additive model: OR = 1.43, 95% CI = 1.14∼1.80, ). The heterogeneity was significant in all genetic models (P<0.1). In the subgroup analysis by ethnicity, significantly increased risk was found in Asian population (dominant model: OR = 1.30, 95% CI = 1.12∼1.51; recessive model: OR = 1.58, 95% CI = 1.07∼2.34; additive model: OR = 1.27, 95% CI = 1.09∼1.48) but not in Caucasian in all genetic models. In the subgroup analysis stratified by cancer type, significantly increased risk was detected in all genetic models in breast cancer (dominant model: OR = 1.99, 95% CI = 1.67∼2.37; recessive model: OR = 5.96, 95% CI = 1.59∼22.33; additive model: OR = 2.54, 95% CI = 2.10∼3.08). With respect to colorectal cancer, significant association was found only in recessive model (OR = 1.38; 95% CI = 1.04∼1.84).
Figure 3

Forest plot (random effects model) describing the association of the IVS7+24G>A polymorphism with risk of cancer.

The IVS7+24G>A polymorphism was associated with increased cancer risk in additive model.

Publication Bias and Sensitivity Analysis

The shapes of the funnel plots did not reveal any evidence of obvious asymmetry for TGFBR1*6A polymorphism in all genetic models, except for recessive model ( ). The Begg’s and Egger’s test also suggested the same results (dominant model: P = 0.54, P0.26; recessive model: P  = 0.00 (7.13×10−4), P = 0.00(2.23×10−5); additive model: P = 0.52, P0.13). For IVS7+24G>A polymorphism, publication bias was not ruled out not only through visual inspection of asymmetry in funnel plots but also through statistical evidence of the Begg’s and Egger’s test (dominant model: P = 1.00, P0.87; recessive model: P  = 0.25, P = 0.89; additive model: P = 0.36, P0.58).
Figure 4

Funnel plot analysis (recessive model of TGFBR1*6A polymorphism) to detect publication bias.

Each point represents an individual study for the indicated association. LogOR, natural logarithm of OR. Perpendicular line, mean effect size.

Sensitivity analysis, which was performed to assess the publication bias and the influence of each individual study on the pooled OR by sequential removal of individual studies, showed that Song’s study [52] was far from the midcourt line for IVS7+24G>A polymorphism in recessive model ( ). However, the heterogeneity and the pooled OR were not influenced when this article was excluded (data not shown), which indicated that our results were statistically stable.
Figure 5

Influence analysis of the summary odds ratio coefficients on the association between IVS7+24G>A polymorphism and cancer risk in recessive model.

Results were computed by omitting each study (left column) in turn. Bars, 95% confidence interval.

Discussion

In the present study, we explored the association between the TGFBR1*6A and IVS7+24G>A polymorphisms and cancer risk, involving 35 eligible case–control studies. For TGFBR1*6A polymorphism, 19,767 cases and 18,516 controls were included. We found that individuals with the TGFBR1*6A allele showed an increased risk of cancer. In the stratified analysis by cancer type, significantly elevated risks were more pronounced among ovarian cancer and breast cancer. However, no significant correlation of polymorphism TGFBR1*6A with colorectal cancer was found. These findings, though including the latest publications, were consistent with a recent meta-analysis study conducted by Liao et al. [14]. While according to Colleran’s study [57], TGFBR1*6A is not associated with breast cancer. This discrepancy may be due to data missing of some important studies, which was exclusively elaborated by Zhang et al. [61]. Another meta-analysis performed by Zhang et al. [25] found TGFBR1*6A is statistically associated with an increased colorectal cancer risk in dominant model. One factor that may contribute to the differences is that we excluded Castillejo’s study [62] for HWE deviation and included two latest studies [22], [23]. Moreover, a significantly increased risk was found among mixed ethnicity from US studies but not among Caucasian and Asian, and this was the first study evaluating the relation between TGFBR1 polymorphism and overall cancer risk among different populations. With respect to IVS7+24G>A polymorphism, a previous meta-analysis conducted by Zhang [24] with only 440 cases and 706 controls found that the IVS7+24G>A carriers had a 76% increase of cancer risk. Another meta-analysis conducted by Zhang et al. [25] found that IVS7+24G>A polymorphism had significant effects on colorectal cancer risk in recessive model. However, there were defects in their meta-analysis [25] for mistaking adenoma cases of Lundin’s study [54] as colorectal cancer cases. For the current meta-analysis, 4,195 cases and 4,383 controls were included. Significant correlation of IVS7+24G>A polymorphism with cancer risk was found in all genetic models. When coming to colorectal cancer, the results were in line with Zhang et al [25]. Besides, we also found strong association between IVS7+24G>A polymorphism and breast cancer risk, indicating that potentially functional IVS7+24G>A polymorphism may play a low penetrance role in development of breast cancer. Significant association was found in Asian but not in Caucasian, suggesting a possible role of ethnic differences in genetic backgrounds and the environment they lived in. To some extent, limitations of this meta-analysis should be addressed. First, the sample sizes of several included studies [12], [37] were rather small and not adequate enough to detect the possible risk for TGFBR1 polymorphisms. Second, cancer is a complex disease with multifactorial etiology. The gene–environment and gene–gene interactions should be further evaluated. Third, haplotype association analysis is the most powerful method to explore the intrinsic effects of gene, but most of the literatures identified in our present meta-analysis were focused on the relation between the two TGFBR1 SNPs and tumor susceptibility, which made it difficult to investigate the TGFBR1 haplotype effects on carcinogenesis. Last but not least, most of US studies were mixed ethnicity, which made it hard to obtain the effects of specific ethnicity on the associations between TGFBR1 polymorphisms and cancer risk. In summary, this meta-analysis provided evidence that the TGFBR1*9A/6A polymorphism is associated with overall cancer susceptibility and seem to be more susceptible to ovarian and breast cancer. Meanwhile, IVS7+24G>A polymorphism is also associated with increased overall cancer risk especially in colorectal and breast cancer. More well-designed epidemiological studies on specific ethnicity and cancer types, which were not well covered by existing studies, will be necessary to validate the findings identified in the current meta-analysis. Further studies regarding other SNPs (or haplotypes) in the TGFBR1 gene and cancer risk are also encouraged to better understand the role of TGFBR1 in carcinogenesis.
  61 in total

1.  Need for clarification of data in the recent meta-analysis about TGFBR1*6A/9A polymorphism and breast cancer risk.

Authors:  Ying Zhang
Journal:  Breast Cancer Res Treat       Date:  2011-10-11       Impact factor: 4.872

2.  TGFBR1*6A is not associated with prostate cancer in men of European ancestry.

Authors:  B K Suarez; P Pal; C H Jin; R Kaushal; G Sun; L Jin; B Pasche; R Deka; W J Catalona
Journal:  Prostate Cancer Prostatic Dis       Date:  2005       Impact factor: 5.554

3.  Lack of an association between the TGFBR1*6A variant and colorectal cancer risk.

Authors:  Johanna Skoglund; Bo Song; Johan Dalén; Stefan Dedorson; David Edler; Fredrik Hjern; Jörn Holm; Claes Lenander; Ulrik Lindforss; Nils Lundqvist; Hans Olivecrona; Louise Olsson; Lars Påhlman; Jörgen Rutegård; Kennet Smedh; Anders Törnqvist; Richard S Houlston; Annika Lindblom
Journal:  Clin Cancer Res       Date:  2007-06-15       Impact factor: 12.531

4.  Association of polymorphisms in transforming growth factor-β receptors with susceptibility to gastric cardia adenocarcinoma.

Authors:  Wei Guo; Zhiming Dong; Yanli Guo; Zhifeng Chen; Zhibin Yang; Gang Kuang
Journal:  Mol Biol Rep       Date:  2011-07-22       Impact factor: 2.316

5.  TbetaR-I(6A) is a candidate tumor susceptibility allele.

Authors:  B Pasche; P Kolachana; K Nafa; J Satagopan; Y G Chen; R S Lo; D Brener; D Yang; L Kirstein; C Oddoux; H Ostrer; P Vineis; L Varesco; S Jhanwar; L Luzzatto; J Massagué; K Offit
Journal:  Cancer Res       Date:  1999-11-15       Impact factor: 12.701

6.  Combined genetic assessment of transforming growth factor-beta signaling pathway variants may predict breast cancer risk.

Authors:  Virginia G Kaklamani; Lisa Baddi; Junjian Liu; Diana Rosman; Sharbani Phukan; Ciarán Bradley; Chris Hegarty; Bree McDaniel; Alfred Rademaker; Carole Oddoux; Harry Ostrer; Loren S Michel; Helen Huang; Yu Chen; Habibul Ahsan; Kenneth Offit; Boris Pasche
Journal:  Cancer Res       Date:  2005-04-15       Impact factor: 12.701

7.  Operating characteristics of a rank correlation test for publication bias.

Authors:  C B Begg; M Mazumdar
Journal:  Biometrics       Date:  1994-12       Impact factor: 2.571

Review 8.  Role of transforming growth factor-beta in cancer progression.

Authors:  Amy J Galliher; Jason R Neil; William P Schiemann
Journal:  Future Oncol       Date:  2006-12       Impact factor: 3.404

9.  Role of transforming growth factor beta in breast carcinogenesis.

Authors:  John R Benson
Journal:  Lancet Oncol       Date:  2004-04       Impact factor: 41.316

Review 10.  Role of transforming growth factor-beta superfamily signaling pathways in human disease.

Authors:  Kelly J Gordon; Gerard C Blobe
Journal:  Biochim Biophys Acta       Date:  2008-02-11
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  13 in total

1.  Human ortholog of Drosophila Melted impedes SMAD2 release from TGF-β receptor I to inhibit TGF-β signaling.

Authors:  Premalatha Shathasivam; Alexandra Kollara; Maurice J Ringuette; Carl Virtanen; Jeffrey L Wrana; Theodore J Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-26       Impact factor: 11.205

Review 2.  TGFBR1 and cancer susceptibility.

Authors:  Boris Pasche; Michael J Pennison; Hugo Jimenez; Minghui Wang
Journal:  Trans Am Clin Climatol Assoc       Date:  2014

3.  TGFBR1*6A is a potential modifier of migration and invasion in colorectal cancer cells.

Authors:  Rui Zhou; Ying Huang; Boran Cheng; Yulei Wang; Bin Xiong
Journal:  Oncol Lett       Date:  2018-01-04       Impact factor: 2.967

4.  Single-nucleotide polymorphisms of TGFβ1 and ATM associated with radiation-induced pneumonitis: a prospective cohort study of thoracic cancer patients in China.

Authors:  Ying Xiao; Xianglin Yuan; Hong Qiu; Qianxia Li
Journal:  Int J Clin Exp Med       Date:  2015-09-15

5.  A genetic variant located in the miR-532-5p-binding site of TGFBR1 is associated with the colorectal cancer risk.

Authors:  Dongying Gu; Shuwei Li; Mulong Du; Cuiju Tang; Haiyan Chu; Na Tong; Zhengdong Zhang; Meilin Wang; Jinfei Chen
Journal:  J Gastroenterol       Date:  2018-07-03       Impact factor: 7.527

Review 6.  TGFBR1*6A as a modifier of breast cancer risk and progression: advances and future prospects.

Authors:  Kojo Agyemang; Allan M Johansen; Grayson W Barker; Michael J Pennison; Kimberly Sheffield; Hugo Jimenez; Carl Blackman; Sambad Sharma; Patrick A Fordjour; Ravi Singh; Katherine L Cook; Hui-Kuan Lin; Wei Zhang; Hui-Wen Lo; Kounosuke Watabe; Peiqing Sun; Carl D Langefeld; Boris Pasche
Journal:  NPJ Breast Cancer       Date:  2022-07-19

7.  Associations between genetic variants in the TGF-β signaling pathway and breast cancer risk among Hispanic and non-Hispanic white women.

Authors:  Stephanie D Boone; Kathy B Baumgartner; Richard N Baumgartner; Avonne E Connor; Christina M Pinkston; Esther M John; Lisa M Hines; Mariana C Stern; Anna R Giuliano; Gabriela Torres-Mejia; Guy N Brock; Frank D Groves; Richard A Kerber; Roger K Wolff; Martha L Slattery
Journal:  Breast Cancer Res Treat       Date:  2013-09-14       Impact factor: 4.872

8.  Little evidence for association between the TGFBR1*6A variant and colorectal cancer: a family-based association study on non-syndromic family members from Australia and Spain.

Authors:  Jason P Ross; Linda J Lockett; Bruce Tabor; Ian W Saunders; Graeme P Young; Finlay Macrae; Ignacio Blanco; Gabriel Capella; Glenn S Brown; Trevor J Lockett; Garry N Hannan
Journal:  BMC Cancer       Date:  2014-07-01       Impact factor: 4.430

9.  Driver gene classification reveals a substantial overrepresentation of tumor suppressors among very large chromatin-regulating proteins.

Authors:  Zeev Waks; Omer Weissbrod; Boaz Carmeli; Raquel Norel; Filippo Utro; Yaara Goldschmidt
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

10.  Sequence Neighborhoods Enable Reliable Prediction of Pathogenic Mutations in Cancer Genomes.

Authors:  Shayantan Banerjee; Karthik Raman; Balaraman Ravindran
Journal:  Cancers (Basel)       Date:  2021-05-14       Impact factor: 6.639

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