Literature DB >> 22905000

4-Methyl-2-(2-nitro-benzene-sulfon-amido)-penta-noic acid.

Muhammad Nadeem Arshad, Muhammad Danish, Muhammad Nawaz Tahir, Savera Khalid, Abdullah M Asiri.   

Abstract

In the title compound, C(12)H(16)N(2)O(6)S, the S atom adopts a distorted tetra-hedral geometry with an O-S-O angle of 119.76 (13)°. The nitro group is twisted by 35.34 (2)° with respect to the aromatic ring; it accepts an N-H⋯O hydrogen bond, resulting in a S(7) motif. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds connect the mol-ecules into an infinite chain along the a axis. The methyl C atoms of the isopropyl group are disordered in a 1:1 ratio.

Entities:  

Year:  2012        PMID: 22905000      PMCID: PMC3415013          DOI: 10.1107/S1600536812033260

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Arshad et al. (2010 ▶), For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C12H16N2O6S M = 316.33 Orthorhombic, a = 6.9593 (5) Å b = 10.7560 (8) Å c = 20.8431 (14) Å V = 1560.19 (19) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.45 × 0.38 × 0.29 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.902, T max = 0.935 11203 measured reflections 2730 independent reflections 2029 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.090 S = 0.99 2730 reflections 212 parameters 10 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.20 e Å−3 Absolute structure: Flack (1983 ▶), 1117 Friedel pairs Flack parameter: 0.07 (10) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033260/ng5283sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033260/ng5283Isup3.hkl Supplementary material file. DOI: 10.1107/S1600536812033260/ng5283Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H16N2O6SF(000) = 664
Mr = 316.33Dx = 1.347 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1789 reflections
a = 6.9593 (5) Åθ = 2.7–19.5°
b = 10.7560 (8) ŵ = 0.23 mm1
c = 20.8431 (14) ÅT = 296 K
V = 1560.19 (19) Å3Prismatic, colorless
Z = 40.45 × 0.38 × 0.29 mm
Bruker Kappa APEXII CCD diffractometer2730 independent reflections
Radiation source: fine-focus sealed tube2029 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −8→8
Tmin = 0.902, Tmax = 0.935k = −12→12
11203 measured reflectionsl = −24→24
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090w = 1/[σ2(Fo2) + (0.041P)2] where P = (Fo2 + 2Fc2)/3
S = 0.99(Δ/σ)max = 0.001
2730 reflectionsΔρmax = 0.15 e Å3
212 parametersΔρmin = −0.20 e Å3
10 restraintsAbsolute structure: Flack (1983), 1117 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.07 (10)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.85210 (10)0.49317 (7)0.11950 (3)0.0477 (2)
O10.6834 (3)0.8270 (3)0.21732 (13)0.0947 (9)
N10.7618 (4)0.7669 (3)0.17531 (14)0.0577 (7)
C11.0039 (4)0.5944 (3)0.16432 (12)0.0445 (7)
O20.6943 (3)0.7525 (2)0.12226 (12)0.0783 (7)
N20.8391 (4)0.5420 (2)0.04664 (11)0.0433 (6)
C20.9481 (4)0.7099 (3)0.18997 (13)0.0460 (8)
O30.6652 (3)0.5002 (2)0.14685 (10)0.0691 (6)
C31.0679 (5)0.7759 (3)0.22962 (15)0.0663 (10)
H31.02690.85090.24710.080*
O40.9507 (3)0.37724 (17)0.11794 (10)0.0633 (6)
C41.2476 (5)0.7316 (4)0.24342 (17)0.0794 (12)
H41.32940.77700.26980.095*
O51.1024 (3)0.73707 (19)0.01558 (9)0.0505 (6)
C51.3060 (5)0.6211 (4)0.21847 (17)0.0757 (11)
H51.42830.59130.22780.091*
O61.3184 (3)0.5923 (2)−0.00802 (12)0.0610 (6)
C61.1854 (5)0.5525 (3)0.17923 (14)0.0569 (9)
H61.22760.47690.16270.068*
C121.1431 (4)0.6294 (3)0.00506 (12)0.0429 (7)
C7A1.0001 (4)0.5234 (2)0.00245 (13)0.0401 (7)0.50
H7A1.06760.44800.01610.048*0.50
C8A0.938 (3)0.504 (2)−0.0676 (7)0.046 (3)0.50
H810.87730.5793−0.08300.056*0.50
H821.05100.4890−0.09360.056*0.50
C9A0.798 (5)0.395 (3)−0.0769 (14)0.0651 (12)0.50
H9A0.71040.3945−0.04000.078*0.50
C10A0.676 (4)0.413 (4)−0.1372 (12)0.104 (7)0.50
H10A0.58860.4815−0.13080.156*0.50
H10B0.60400.3390−0.14570.156*0.50
H10C0.75800.4312−0.17300.156*0.50
C11A0.903 (9)0.272 (3)−0.077 (3)0.116 (7)0.50
H11A0.99240.2710−0.11260.174*0.50
H11B0.81240.2058−0.08240.174*0.50
H11C0.97160.2622−0.03780.174*0.50
C7B1.0001 (4)0.5234 (2)0.00245 (13)0.0401 (7)0.50
H7B1.06450.44440.01170.048*0.50
C8B0.910 (4)0.520 (2)−0.0647 (7)0.046 (3)0.50
H830.82430.5907−0.06930.056*0.50
H841.01090.5285−0.09640.056*0.50
C9B0.797 (5)0.401 (3)−0.0783 (13)0.0651 (12)0.50
H9B0.67920.4034−0.05270.078*0.50
C10B0.739 (4)0.398 (4)−0.1495 (12)0.104 (7)0.50
H10D0.67140.4726−0.16010.156*0.50
H10E0.65680.3273−0.15700.156*0.50
H10F0.85180.3907−0.17560.156*0.50
C11B0.905 (9)0.283 (3)−0.061 (3)0.116 (7)0.50
H11D1.02780.2832−0.08120.174*0.50
H11E0.83210.2123−0.07430.174*0.50
H11F0.92170.2803−0.01490.174*0.50
H2N0.780 (5)0.611 (2)0.042 (2)0.139*
H6O1.393 (6)0.655 (3)−0.013 (3)0.174*
U11U22U33U12U13U23
S10.0575 (4)0.0422 (4)0.0435 (4)−0.0031 (4)0.0088 (4)0.0032 (4)
O10.0808 (18)0.107 (2)0.096 (2)0.0244 (16)0.0092 (15)−0.0496 (17)
N10.0688 (18)0.0496 (18)0.0548 (19)0.0067 (14)0.0099 (16)−0.0070 (15)
C10.0542 (19)0.0466 (19)0.0328 (16)0.0021 (16)0.0081 (14)0.0022 (14)
O20.0921 (16)0.0889 (18)0.0541 (14)0.0387 (14)−0.0074 (14)0.0009 (14)
N20.0490 (14)0.0458 (15)0.0351 (13)0.0012 (11)0.0038 (12)−0.0004 (11)
C20.0512 (17)0.052 (2)0.0349 (16)0.0026 (16)0.0075 (14)0.0006 (15)
O30.0682 (14)0.0802 (16)0.0589 (13)−0.0165 (15)0.0231 (11)−0.0023 (12)
C30.075 (2)0.068 (2)0.055 (2)−0.004 (2)0.0129 (18)−0.019 (2)
O40.0946 (16)0.0380 (13)0.0574 (13)0.0074 (10)0.0061 (13)0.0052 (11)
C40.062 (2)0.106 (3)0.070 (3)−0.012 (2)0.005 (2)−0.034 (2)
O50.0464 (11)0.0390 (13)0.0661 (15)−0.0011 (9)0.0019 (10)−0.0059 (11)
C50.058 (2)0.108 (3)0.061 (2)0.012 (2)−0.0014 (18)−0.014 (2)
O60.0413 (13)0.0466 (13)0.0952 (17)0.0033 (10)0.0060 (12)−0.0068 (13)
C60.058 (2)0.071 (2)0.0417 (18)0.0103 (17)0.0038 (16)−0.0035 (16)
C120.0466 (16)0.0431 (19)0.0391 (17)0.0025 (14)−0.0021 (15)−0.0025 (14)
C7A0.0409 (15)0.0398 (17)0.0396 (15)−0.0010 (13)0.0078 (12)−0.0005 (14)
C8A0.053 (5)0.042 (5)0.044 (2)−0.005 (4)0.008 (3)−0.009 (2)
C9A0.085 (2)0.058 (3)0.052 (2)−0.029 (2)−0.0011 (19)−0.007 (2)
C10A0.143 (16)0.115 (10)0.055 (9)−0.066 (13)−0.013 (10)−0.011 (6)
C11A0.146 (4)0.049 (5)0.15 (2)−0.017 (5)−0.031 (13)−0.046 (7)
C7B0.0409 (15)0.0398 (17)0.0396 (15)−0.0010 (13)0.0078 (12)−0.0005 (14)
C8B0.053 (5)0.042 (5)0.044 (2)−0.005 (4)0.008 (3)−0.009 (2)
C9B0.085 (2)0.058 (3)0.052 (2)−0.029 (2)−0.0011 (19)−0.007 (2)
C10B0.143 (16)0.115 (10)0.055 (9)−0.066 (13)−0.013 (10)−0.011 (6)
C11B0.146 (4)0.049 (5)0.15 (2)−0.017 (5)−0.031 (13)−0.046 (7)
S1—O31.422 (2)C8A—C9A1.532 (12)
S1—O41.424 (2)C8A—H810.9700
S1—N21.609 (2)C8A—H820.9700
S1—C11.781 (3)C9A—C11A1.511 (13)
O1—N11.217 (3)C9A—C10A1.531 (13)
N1—O21.211 (3)C9A—H9A0.9800
N1—C21.466 (4)C10A—H10A0.9600
C1—C61.376 (4)C10A—H10B0.9600
C1—C21.408 (4)C10A—H10C0.9600
N2—C7A1.464 (3)C11A—H11A0.9600
N2—H2N0.850 (10)C11A—H11B0.9600
C2—C31.372 (4)C11A—H11C0.9600
C3—C41.369 (5)C8B—C9B1.530 (11)
C3—H30.9300C8B—H830.9700
C4—C51.360 (5)C8B—H840.9700
C4—H40.9300C9B—C11B1.513 (12)
O5—C121.212 (3)C9B—C10B1.538 (14)
C5—C61.385 (4)C9B—H9B0.9800
C5—H50.9300C10B—H10D0.9600
O6—C121.312 (3)C10B—H10E0.9600
O6—H6O0.852 (10)C10B—H10F0.9600
C6—H60.9300C11B—H11D0.9600
C12—C7A1.514 (4)C11B—H11E0.9600
C7A—C8A1.538 (11)C11B—H11F0.9600
C7A—H7A0.9800
O3—S1—O4119.76 (13)N2—C7A—H7A107.3
O3—S1—N2108.02 (13)C12—C7A—H7A107.3
O4—S1—N2106.94 (13)C8A—C7A—H7A107.3
O3—S1—C1107.46 (13)C9A—C8A—C7A113.8 (14)
O4—S1—C1105.15 (14)C9A—C8A—H81108.8
N2—S1—C1109.20 (13)C7A—C8A—H81108.8
O2—N1—O1123.4 (3)C9A—C8A—H82108.8
O2—N1—C2118.7 (3)C7A—C8A—H82108.8
O1—N1—C2118.0 (3)H81—C8A—H82107.7
C6—C1—C2117.2 (3)C11A—C9A—C10A112.0 (15)
C6—C1—S1117.6 (2)C11A—C9A—C8A111.0 (17)
C2—C1—S1125.1 (2)C10A—C9A—C8A111.0 (15)
C7A—N2—S1120.39 (19)C11A—C9A—H9A107.5
C7A—N2—H2N115 (3)C10A—C9A—H9A107.5
S1—N2—H2N114 (3)C8A—C9A—H9A107.5
C3—C2—C1121.2 (3)C9B—C8B—H83108.9
C3—C2—N1116.5 (3)C9B—C8B—H84108.9
C1—C2—N1122.3 (3)H83—C8B—H84107.7
C4—C3—C2120.1 (3)C11B—C9B—C8B113.7 (15)
C4—C3—H3120.0C11B—C9B—C10B110.3 (16)
C2—C3—H3120.0C8B—C9B—C10B109.5 (16)
C5—C4—C3119.8 (4)C11B—C9B—H9B107.7
C5—C4—H4120.1C8B—C9B—H9B107.7
C3—C4—H4120.1C10B—C9B—H9B107.7
C4—C5—C6120.7 (3)C9B—C10B—H10D109.5
C4—C5—H5119.7C9B—C10B—H10E109.5
C6—C5—H5119.7H10D—C10B—H10E109.5
C12—O6—H6O111 (4)C9B—C10B—H10F109.5
C1—C6—C5121.0 (3)H10D—C10B—H10F109.5
C1—C6—H6119.5H10E—C10B—H10F109.5
C5—C6—H6119.5C9B—C11B—H11D109.5
O5—C12—O6123.0 (3)C9B—C11B—H11E109.5
O5—C12—C7A124.9 (3)H11D—C11B—H11E109.5
O6—C12—C7A112.0 (2)C9B—C11B—H11F109.5
N2—C7A—C12112.2 (2)H11D—C11B—H11F109.5
N2—C7A—C8A113.6 (10)H11E—C11B—H11F109.5
C12—C7A—C8A108.9 (9)
O3—S1—C1—C6137.9 (2)C1—C2—C3—C41.9 (5)
O4—S1—C1—C69.3 (3)N1—C2—C3—C4−177.2 (3)
N2—S1—C1—C6−105.2 (2)C2—C3—C4—C5−0.9 (5)
O3—S1—C1—C2−36.9 (3)C3—C4—C5—C6−0.1 (5)
O4—S1—C1—C2−165.5 (2)C2—C1—C6—C50.7 (4)
N2—S1—C1—C280.0 (3)S1—C1—C6—C5−174.5 (2)
O3—S1—N2—C7A−168.2 (2)C4—C5—C6—C10.2 (5)
O4—S1—N2—C7A−38.0 (2)S1—N2—C7A—C12−88.8 (2)
C1—S1—N2—C7A75.3 (2)S1—N2—C7A—C8A147.2 (10)
C6—C1—C2—C3−1.8 (4)O5—C12—C7A—N2−32.7 (4)
S1—C1—C2—C3173.0 (2)O6—C12—C7A—N2149.8 (2)
C6—C1—C2—N1177.3 (3)O5—C12—C7A—C8A93.8 (11)
S1—C1—C2—N1−7.9 (4)O6—C12—C7A—C8A−83.6 (11)
O2—N1—C2—C3144.3 (3)N2—C7A—C8A—C9A−56 (2)
O1—N1—C2—C3−35.4 (4)C12—C7A—C8A—C9A177.8 (18)
O2—N1—C2—C1−34.8 (4)C7A—C8A—C9A—C11A−80 (3)
O1—N1—C2—C1145.5 (3)C7A—C8A—C9A—C10A155 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2N···O20.85 (1)2.34 (4)2.937 (3)128 (4)
O6—H6O···O5i0.85 (1)1.87 (2)2.702 (3)166 (5)
N2—H2N···O5ii0.85 (1)2.38 (2)3.169 (3)155 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2N⋯O20.85 (1)2.34 (4)2.937 (3)128 (4)
O6—H6O⋯O5i 0.85 (1)1.87 (2)2.702 (3)166 (5)
N2—H2N⋯O5ii 0.85 (1)2.38 (2)3.169 (3)155 (4)

Symmetry codes: (i) ; (ii) .

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1.  Ethyl 2-benzene-sulfonamido-4-methyl-penta-noate.

Authors:  Muhammad Nadeem Arshad; Muhammad Danish; Muhammad Nawaz Tahir; Savera Khalid; Abdullah M Asiri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-08

2.  2-Benzene-sulfonamido-3-methyl-butyric acid.

Authors:  Muhammad Nadeem Arshad; Muhammad Danish; Muhammad Nawaz Tahir; Zain Ul Aabideen; Abdullah M Asiri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-08
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