Literature DB >> 21580312

N-(p-Tolyl-sulfon-yl)-l-asparagine.

Muhammad Nadeem Arshad, Hafiz Mubashar-Ur-Rehman, Islam Ullah Khan, Muhammad Shafiq, Kong Mun Lo.   

Abstract

In the title compound, C(11)H(14)N(2)O(5)S, the n class="Chemical">amide O atom acts as a hydrogen-bond acceptor from a carboxyl-ate O atom and a secondary amino N atom. In addition, one of the sulfonyl O atoms and the carbonyl O atom of the carboxyl group also form hydrogen bonds with the primary amido N atom. These intermolecular hydrogen-bonding inter-actions give rise to a layer structure, with the layers parallel to the ac plane.

Entities:  

Year:  2010        PMID: 21580312      PMCID: PMC2983693          DOI: 10.1107/S1600536810004034

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the anti­bacterial and anti­cancer activity of l-asparagines, Wagastuma et al. (1983 ▶); Murphy & Stubbins (1980 ▶). For a related compound, see Arshad et al. (2009 ▶).

Experimental

Crystal data

C11H14N2O5S M = 286.30 Orthorhombic, a = 8.7566 (6) Å b = 22.900 (2) Å c = 6.9692 (7) Å V = 1397.5 (2) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 296 K 0.37 × 0.11 × 0.07 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.914, T max = 0.983 8388 measured reflections 3206 independent reflections 2451 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.099 S = 1.02 3206 reflections 174 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.27 e Å−3 Absolute structure: Flack (1983 ▶), 1338 Friedel pairs Flack parameter: −0.03 (8) Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810004034/bv2133sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810004034/bv2133Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H14N2O5SF(000) = 600
Mr = 286.30Dx = 1.361 Mg m3
Orthorhombic, P21212Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2 2abCell parameters from 2600 reflections
a = 8.7566 (6) Åθ = 2.5–24°
b = 22.900 (2) ŵ = 0.25 mm1
c = 6.9692 (7) ÅT = 296 K
V = 1397.5 (2) Å3Block, white
Z = 40.37 × 0.11 × 0.07 mm
Bruker APEXII CCD area-detector diffractometer3206 independent reflections
Radiation source: fine-focus sealed tube2451 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 27.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.914, Tmax = 0.983k = −26→29
8388 measured reflectionsl = −9→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.099w = 1/[σ2(Fo2) + (0.0521P)2 + ] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3206 reflectionsΔρmax = 0.18 e Å3
174 parametersΔρmin = −0.27 e Å3
0 restraintsAbsolute structure: Flack (1983), 1328 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.03 (8)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.95716 (6)0.62903 (3)0.10823 (10)0.04939 (18)
O10.9573 (2)0.61117 (9)−0.0862 (3)0.0778 (6)
O21.09832 (17)0.64258 (8)0.2020 (3)0.0636 (5)
O30.62170 (16)0.68014 (8)0.3996 (2)0.0554 (4)
O40.76473 (19)0.73119 (9)0.6017 (2)0.0629 (5)
H40.70190.72000.68080.094*
O51.08999 (14)0.79700 (8)0.1128 (2)0.0493 (4)
N10.85411 (17)0.68699 (8)0.1208 (3)0.0392 (4)
H10.79660.69600.02530.047*
N20.90525 (19)0.82712 (9)−0.0810 (3)0.0522 (5)
H2A0.97030.8367−0.16800.063*
H2B0.80930.8323−0.10080.063*
C10.8685 (3)0.57415 (11)0.2442 (4)0.0490 (6)
C20.8893 (3)0.57211 (12)0.4400 (4)0.0619 (7)
H20.95110.59940.50130.074*
C30.8171 (4)0.52899 (16)0.5433 (5)0.0807 (10)
H30.83030.52770.67570.097*
C40.7259 (4)0.48771 (14)0.4570 (6)0.0796 (10)
C50.7061 (4)0.49096 (16)0.2613 (7)0.0896 (11)
H50.64420.46370.20020.107*
C60.7762 (3)0.53379 (13)0.1549 (5)0.0712 (9)
H60.76130.53550.02290.085*
C70.6559 (5)0.43887 (16)0.5732 (7)0.1317 (18)
H7A0.59550.41450.49080.198*
H7B0.59210.45510.67190.198*
H7C0.73550.41600.63090.198*
C80.8551 (2)0.72435 (9)0.2877 (3)0.0357 (5)
H80.95510.72080.34970.043*
C90.7331 (2)0.70850 (10)0.4343 (3)0.0375 (5)
C100.8332 (2)0.78799 (10)0.2275 (3)0.0416 (5)
H10A0.73190.79310.17350.050*
H10B0.84200.81310.33890.050*
C110.9521 (2)0.80490 (9)0.0805 (3)0.0362 (5)
U11U22U33U12U13U23
S10.0400 (3)0.0489 (3)0.0592 (4)0.0011 (3)0.0150 (3)−0.0021 (3)
O10.0992 (14)0.0717 (13)0.0624 (12)0.0039 (11)0.0320 (12)−0.0157 (11)
O20.0324 (8)0.0578 (11)0.1005 (15)0.0023 (7)0.0067 (8)0.0111 (11)
O30.0385 (8)0.0806 (12)0.0471 (9)−0.0149 (8)0.0005 (7)0.0108 (10)
O40.0571 (10)0.0946 (15)0.0369 (9)−0.0274 (9)0.0162 (8)−0.0073 (10)
O50.0301 (7)0.0789 (12)0.0388 (8)−0.0034 (7)−0.0020 (7)0.0164 (10)
N10.0368 (8)0.0467 (11)0.0342 (9)0.0025 (8)0.0010 (8)0.0005 (10)
N20.0325 (8)0.0808 (15)0.0432 (11)0.0045 (9)0.0011 (8)0.0199 (11)
C10.0413 (11)0.0409 (14)0.0646 (16)0.0019 (10)0.0084 (11)−0.0013 (13)
C20.0677 (16)0.0459 (16)0.072 (2)−0.0084 (13)−0.0039 (13)0.0062 (14)
C30.096 (2)0.067 (2)0.079 (2)−0.0022 (19)0.0075 (17)0.0203 (19)
C40.074 (2)0.046 (2)0.119 (3)−0.0002 (16)0.0206 (19)0.017 (2)
C50.076 (2)0.059 (2)0.134 (3)−0.0230 (16)0.006 (2)−0.010 (2)
C60.0749 (18)0.0609 (19)0.078 (2)−0.0156 (16)0.0060 (15)−0.0088 (17)
C70.127 (3)0.074 (3)0.195 (5)−0.013 (2)0.033 (4)0.059 (3)
C80.0277 (9)0.0456 (13)0.0338 (11)−0.0016 (9)0.0021 (8)0.0037 (10)
C90.0315 (9)0.0479 (14)0.0332 (11)0.0011 (9)0.0000 (8)0.0078 (10)
C100.0390 (11)0.0457 (14)0.0400 (12)0.0033 (10)0.0086 (9)0.0032 (11)
C110.0339 (9)0.0393 (11)0.0353 (11)−0.0010 (9)0.0012 (9)0.0021 (10)
S1—O11.416 (2)C3—C41.376 (5)
S1—O21.4322 (18)C3—H30.9300
S1—N11.6074 (18)C4—C51.377 (5)
S1—C11.755 (3)C4—C71.511 (4)
O3—C91.197 (2)C5—C61.374 (5)
O4—C91.307 (2)C5—H50.9300
O4—H40.8200C6—H60.9300
O5—C111.242 (2)C7—H7A0.9600
N1—C81.444 (3)C7—H7B0.9600
N1—H10.8600C7—H7C0.9600
N2—C111.302 (3)C8—C91.522 (3)
N2—H2A0.8600C8—C101.529 (3)
N2—H2B0.8600C8—H80.9800
C1—C61.376 (4)C10—C111.511 (3)
C1—C21.378 (4)C10—H10A0.9700
C2—C31.376 (4)C10—H10B0.9700
C2—H20.9300
O1—S1—O2119.92 (11)C5—C6—C1119.8 (3)
O1—S1—N1106.93 (11)C5—C6—H6120.1
O2—S1—N1106.30 (10)C1—C6—H6120.1
O1—S1—C1108.07 (13)C4—C7—H7A109.5
O2—S1—C1106.91 (12)C4—C7—H7B109.5
N1—S1—C1108.27 (10)H7A—C7—H7B109.5
C9—O4—H4109.5C4—C7—H7C109.5
C8—N1—S1122.00 (14)H7A—C7—H7C109.5
C8—N1—H1119.0H7B—C7—H7C109.5
S1—N1—H1119.0N1—C8—C9113.27 (17)
C11—N2—H2A120.0N1—C8—C10110.06 (17)
C11—N2—H2B120.0C9—C8—C10108.87 (17)
H2A—N2—H2B120.0N1—C8—H8108.2
C6—C1—C2120.2 (3)C9—C8—H8108.2
C6—C1—S1119.8 (2)C10—C8—H8108.2
C2—C1—S1120.0 (2)O3—C9—O4124.65 (19)
C3—C2—C1118.8 (3)O3—C9—C8124.49 (19)
C3—C2—H2120.6O4—C9—C8110.84 (17)
C1—C2—H2120.6C11—C10—C8110.12 (17)
C4—C3—C2122.1 (3)C11—C10—H10A109.6
C4—C3—H3119.0C8—C10—H10A109.6
C2—C3—H3119.0C11—C10—H10B109.6
C3—C4—C5118.0 (3)C8—C10—H10B109.6
C3—C4—C7120.7 (4)H10A—C10—H10B108.2
C5—C4—C7121.3 (4)O5—C11—N2121.34 (19)
C6—C5—C4121.1 (3)O5—C11—C10120.65 (19)
C6—C5—H5119.4N2—C11—C10118.00 (17)
C4—C5—H5119.4
O1—S1—N1—C8−166.24 (16)C7—C4—C5—C6−176.8 (3)
O2—S1—N1—C8−37.03 (17)C4—C5—C6—C10.3 (5)
C1—S1—N1—C877.52 (17)C2—C1—C6—C5−0.7 (4)
O1—S1—C1—C6−19.0 (3)S1—C1—C6—C5−179.7 (3)
O2—S1—C1—C6−149.3 (2)S1—N1—C8—C9−91.79 (18)
N1—S1—C1—C696.5 (2)S1—N1—C8—C10146.07 (15)
O1—S1—C1—C2162.1 (2)N1—C8—C9—O3−19.7 (3)
O2—S1—C1—C231.7 (3)C10—C8—C9—O3103.1 (2)
N1—S1—C1—C2−82.4 (2)N1—C8—C9—O4161.76 (19)
C6—C1—C2—C30.3 (4)C10—C8—C9—O4−75.4 (2)
S1—C1—C2—C3179.3 (2)N1—C8—C10—C11−54.8 (2)
C1—C2—C3—C40.5 (5)C9—C8—C10—C11−179.54 (17)
C2—C3—C4—C5−1.0 (5)C8—C10—C11—O5−53.0 (3)
C2—C3—C4—C7176.4 (3)C8—C10—C11—N2126.1 (2)
C3—C4—C5—C60.6 (6)
D—H···AD—HH···AD···AD—H···A
O4—H4···O5i0.821.782.592 (2)168
N1—H1···O5ii0.862.062.852 (2)154
N2—H2A···O3iii0.862.122.924 (2)155
N2—H2B···O2ii0.862.062.901 (2)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O5i0.821.782.592 (2)168
N1—H1⋯O5ii0.862.062.852 (2)154
N2—H2A⋯O3iii0.862.122.924 (2)155
N2—H2B⋯O2ii0.862.062.901 (2)166

Symmetry codes: (i) ; (ii) ; (iii) .

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