Literature DB >> 22904984

Melaminium hydrogen malonate.

Barbara Froschauer, Matthias Weil.   

Abstract

The melaminium (n class="Chemical">2,4,6-triamino-1,3,5-triazin-1-ium) cation in the title compound, C(3)H(7)N(6) (+)·C(3)H(3)O(4) (-), is essentially planar, with a r.m.s. deviation of the non-H atoms of 0.0085 Å. Extensive hydrogen bonding of the types N-H⋯N and N-H⋯O between cations and cations and between cations and hydrogen malonate (2-carb-oxy-ethano-ate) anions leads to the formation of supra-molecular layers parallel to (1-2-1). An intra-molecular O-H⋯O hydrogen bond in the single deprotonated malonate anion also occurs.

Entities:  

Year:  2012        PMID: 22904984      PMCID: PMC3414997          DOI: 10.1107/S1600536812033016

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of melaminium salts in polymer science, see: Weinstabl et al. (2001 ▶). For structural studies of n class="Chemical">melaminium salts of purely organic carb­oxy­lic acids, see: Choi et al. (2004 ▶); Janczak & Perpétuo (2001 ▶, 2002 ▶, 2003 ▶, 2004 ▶); Karle et al. (2003 ▶); Marchewka et al. (2003 ▶); Perpétuo & Janczak (2002 ▶, 2005 ▶); Perpétuo et al. (2005 ▶); Prior et al. (2009 ▶); Su et al. (2009 ▶); Udaya Lakshmi et al. (2006 ▶); Froschauer & Weil (2012 ▶); Zhang et al. (2004 ▶, 2005 ▶).

Experimental

Crystal data

C3H7N6n class="Chemical">C3H3O4 − M = 230.20 Triclinic, a = 5.1996 (15) Å b = 7.499 (2) Å c = 13.119 (4) Å α = 100.206 (5)° β = 98.014 (5)° γ = 106.534 (5)° V = 472.7 (2) Å3 Z = 2 Mo Kα radiation μ = 0.14 mm−1 T = 293 K 0.23 × 0.18 × 0.12 mm

Data collection

Siemens SMART CCD diffractometer 4807 measured reflections 2354 independent reflections 1190 reflections with I > 2σ(I) R int = 0.078

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.105 S = 0.89 2354 reflections 150 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.23 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶) and ATOMS (Dowty, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812033016/cv5323sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812033016/cv5323Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812033016/cv5323Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H7N6+·C3H3O4Z = 2
Mr = 230.20F(000) = 240
Triclinic, P1Dx = 1.617 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.1996 (15) ÅCell parameters from 950 reflections
b = 7.499 (2) Åθ = 2.9–25.6°
c = 13.119 (4) ŵ = 0.14 mm1
α = 100.206 (5)°T = 293 K
β = 98.014 (5)°Irregular, colourless
γ = 106.534 (5)°0.23 × 0.18 × 0.12 mm
V = 472.7 (2) Å3
Siemens SMART CCD diffractometer1190 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.078
Graphite monochromatorθmax = 28.5°, θmin = 2.9°
ω scansh = −6→6
4807 measured reflectionsk = −10→10
2354 independent reflectionsl = −17→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.105w = 1/[σ2(Fo2) + (0.038P)2] where P = (Fo2 + 2Fc2)/3
S = 0.89(Δ/σ)max < 0.001
2354 reflectionsΔρmax = 0.23 e Å3
150 parametersΔρmin = −0.23 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.058 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
H101.131 (4)0.844 (3)0.9236 (18)0.068 (7)*
O11.0512 (3)0.8287 (2)0.84785 (11)0.0556 (5)
N10.2299 (3)0.7179 (2)0.29981 (11)0.0321 (4)
H10.11590.69500.24120.038*
N20.3254 (3)0.6667 (2)0.47008 (11)0.0313 (4)
O20.6330 (3)0.6777 (2)0.75923 (10)0.0490 (4)
N30.6677 (3)0.8814 (2)0.40391 (11)0.0322 (4)
N4−0.0943 (3)0.5082 (2)0.36078 (11)0.0385 (4)
H3−0.14740.45050.40890.046*
H2−0.20360.48580.30110.046*
C10.1545 (3)0.6307 (2)0.37848 (13)0.0294 (4)
C30.4874 (3)0.8417 (2)0.31493 (14)0.0311 (4)
C50.7245 (4)0.6701 (3)0.94033 (14)0.0429 (5)
H80.63230.53330.92290.051*
H90.59200.73110.96050.051*
C20.5776 (3)0.7909 (2)0.47902 (13)0.0288 (4)
N60.5500 (3)0.9219 (2)0.23620 (11)0.0452 (5)
H60.71041.00150.24230.054*
H70.43040.89460.17870.054*
N50.7554 (3)0.8292 (2)0.56860 (11)0.0387 (4)
H40.70900.77560.61900.046*
H50.91750.90780.57660.046*
C60.7986 (3)0.7256 (3)0.84124 (14)0.0337 (5)
O40.8950 (3)0.6463 (2)1.11234 (10)0.0585 (5)
C40.9489 (4)0.7151 (3)1.03630 (15)0.0394 (5)
O31.1859 (2)0.8250 (2)1.03379 (10)0.0528 (4)
U11U22U33U12U13U23
O10.0362 (8)0.0771 (11)0.0396 (9)−0.0090 (7)0.0065 (7)0.0240 (8)
N10.0280 (8)0.0396 (9)0.0232 (8)0.0021 (7)0.0000 (6)0.0118 (7)
N20.0264 (8)0.0365 (9)0.0258 (8)0.0008 (7)0.0023 (6)0.0110 (7)
O20.0391 (8)0.0689 (10)0.0324 (8)0.0037 (7)0.0010 (6)0.0218 (7)
N30.0280 (8)0.0395 (9)0.0275 (8)0.0042 (6)0.0043 (6)0.0153 (7)
N40.0290 (8)0.0480 (10)0.0293 (9)−0.0025 (7)−0.0005 (7)0.0152 (7)
C10.0274 (9)0.0309 (10)0.0273 (10)0.0048 (8)0.0050 (8)0.0075 (8)
C30.0284 (10)0.0324 (10)0.0307 (11)0.0055 (8)0.0061 (8)0.0098 (8)
C50.0295 (10)0.0590 (13)0.0356 (11)0.0024 (9)0.0034 (8)0.0208 (10)
C20.0253 (9)0.0306 (10)0.0281 (10)0.0065 (8)0.0017 (8)0.0077 (8)
N60.0338 (9)0.0611 (11)0.0309 (9)−0.0052 (8)0.0003 (7)0.0232 (8)
N50.0307 (8)0.0493 (10)0.0286 (9)−0.0019 (7)−0.0002 (7)0.0183 (7)
C60.0288 (10)0.0397 (11)0.0312 (11)0.0064 (8)0.0044 (9)0.0132 (9)
O40.0481 (9)0.0789 (11)0.0345 (8)−0.0047 (8)−0.0037 (7)0.0274 (8)
C40.0344 (11)0.0459 (12)0.0330 (11)0.0065 (9)0.0033 (8)0.0100 (9)
O30.0327 (8)0.0700 (10)0.0404 (9)−0.0041 (7)−0.0012 (6)0.0140 (7)
O1—C61.303 (2)C3—N61.318 (2)
O1—H100.99 (2)C5—C61.501 (2)
N1—C31.359 (2)C5—C41.509 (3)
N1—C11.361 (2)C5—H80.9700
N1—H10.8600C5—H90.9700
N2—C11.326 (2)C2—N51.321 (2)
N2—C21.351 (2)N6—H60.8600
O2—C61.207 (2)N6—H70.8600
N3—C31.320 (2)N5—H40.8600
N3—C21.355 (2)N5—H50.8600
N4—C11.318 (2)O4—C41.232 (2)
N4—H30.8600C4—O31.281 (2)
N4—H20.8600O3—H101.47 (2)
C6—O1—H10101.7 (12)C4—C5—H9107.6
C3—N1—C1119.22 (15)H8—C5—H9107.0
C3—N1—H1120.4N5—C2—N2117.92 (16)
C1—N1—H1120.4N5—C2—N3116.12 (15)
C1—N2—C2115.93 (15)N2—C2—N3125.96 (15)
C3—N3—C2115.32 (15)C3—N6—H6120.0
C1—N4—H3120.0C3—N6—H7120.0
C1—N4—H2120.0H6—N6—H7120.0
H3—N4—H2120.0C2—N5—H4120.0
N4—C1—N2120.72 (15)C2—N5—H5120.0
N4—C1—N1117.93 (15)H4—N5—H5120.0
N2—C1—N1121.35 (15)O2—C6—O1121.35 (17)
N6—C3—N3121.03 (15)O2—C6—C5121.91 (16)
N6—C3—N1116.77 (15)O1—C6—C5116.74 (16)
N3—C3—N1122.21 (15)O4—C4—O3123.80 (18)
C6—C5—C4118.87 (15)O4—C4—C5118.79 (17)
C6—C5—H8107.6O3—C4—C5117.40 (17)
C4—C5—H8107.6C4—O3—H1098.9 (8)
C6—C5—H9107.6
D—H···AD—HH···AD···AD—H···A
N1—H1···O4i0.861.822.6785 (19)176
N4—H2···O2ii0.862.172.8350 (19)134
N4—H3···N2ii0.862.142.994 (2)171
N5—H4···O20.862.142.998 (2)172
N5—H5···N3iii0.862.233.091 (2)178
N6—H6···O1iii0.862.152.8592 (19)140
N6—H7···O3i0.862.022.880 (2)173
O1—H10···O31.00 (2)1.47 (2)2.450 (2)165 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O4i 0.861.822.6785 (19)176
N4—H2⋯O2ii 0.862.172.8350 (19)134
N4—H3⋯N2ii 0.862.142.994 (2)171
N5—H4⋯O20.862.142.998 (2)172
N5—H5⋯N3iii 0.862.233.091 (2)178
N6—H6⋯O1iii 0.862.152.8592 (19)140
N6—H7⋯O3i 0.862.022.880 (2)173
O1—H10⋯O31.00 (2)1.47 (2)2.450 (2)165 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

  10 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Melaminium acetate acetic acid solvate monohydrate.

Authors:  Genivaldo Julio Perpétuo; Jan Janczak
Journal:  Acta Crystallogr C       Date:  2002-01-23       Impact factor: 1.172

3.  Melaminium phthalate.

Authors:  J Janczak ; G J Perpétuo
Journal:  Acta Crystallogr C       Date:  2001-01       Impact factor: 1.172

4.  Cocrystallization of melaminium levulinate monohydrate.

Authors:  Chan Soo Choi; Ramaiyer Venkatraman; Eun Hee Kim; Hae Sook Hwang; Sung Kwon Kang
Journal:  Acta Crystallogr C       Date:  2004-03-31       Impact factor: 1.172

5.  Melaminium 2,4,6-trihydroxy-benzoate dihydrate.

Authors:  Timothy J Prior; Osman Goch; Rebecca L Kift
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-12

6.  Melaminium maleate monohydrate.

Authors:  Jan Janczak; Genivaldo Julio Perpétuo
Journal:  Acta Crystallogr C       Date:  2004-02-19       Impact factor: 1.172

7.  Melaminium glutarate monohydrate.

Authors:  Jan Janczak; Genivaldo Julio Perpétuo
Journal:  Acta Crystallogr C       Date:  2002-05-21       Impact factor: 1.172

8.  Bis(melaminium) DL-malate tetrahydrate.

Authors:  Jan Janczak; Genivaldo Julio Perpétuo
Journal:  Acta Crystallogr C       Date:  2003-05-31       Impact factor: 1.172

9.  Bis(melaminium) tartrate dihydrate.

Authors:  Hong Su; Yao-Kang Lv; Yun-Long Feng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-31

10.  Bis(melaminium) succinate succinic acid monosolvate dihydrate.

Authors:  Barbara Froschauer; Matthias Weil
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-25
  10 in total
  2 in total

1.  Bis(2,4,6-tri-amino-1,3,5-triazin-1-ium) 2-[bis-(carboxyl-atometh-yl)aza-nium-yl]acetate trihydrate.

Authors:  Kreshnik Hoxha; Timothy J Prior
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-19

2.  Bis(melaminium) succinate succinic acid monosolvate dihydrate.

Authors:  Barbara Froschauer; Matthias Weil
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-25
  2 in total

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