Literature DB >> 22904983

(E)-N-Ethyl-2-[(E)-3-(hy-droxy-imino)-butan-2-yl-idene]hydrazinecarbothio-amide.

Halema Shaban Abduelftah, Amna Qasem Ali, Naser Eltaher Eltayeb, Siang Guan Teoh, Hoong-Kun Fun.   

Abstract

In the crystal structure of the title compound, C(7)H(14)N(4)OS, mol-ecules are linked through N-H⋯S and O-H⋯N hydrogen bonds and C-H⋯S interactions, forming chains propagating along [21-1].

Entities:  

Year:  2012        PMID: 22904983      PMCID: PMC3414996          DOI: 10.1107/S1600536812028632

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see:Abduelftah et al. (2012a ▶,b ▶); Choi et al. (2008 ▶). For the biological activity and pharmacological properties of thio­semicarbazones and their metal complexes, see: Cowley et al. (2002 ▶); Ming (2003 ▶). For graph-set analysis of hydrogen bonds, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C7H14N4OS M = 202.28 Triclinic, a = 5.7065 (2) Å b = 9.0632 (3) Å c = 10.7109 (4) Å α = 71.309 (1)° β = 76.318 (1)° γ = 86.420 (1)° V = 509.80 (3) Å3 Z = 2 Mo Kα radiation μ = 0.29 mm−1 T = 100 K 0.57 × 0.20 × 0.07 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.854, T max = 0.979 15442 measured reflections 4093 independent reflections 3648 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.093 S = 1.08 4093 reflections 121 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028632/ng5276sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028632/ng5276Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812028632/ng5276Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H14N4OSZ = 2
Mr = 202.28F(000) = 216
Triclinic, P1Dx = 1.318 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.7065 (2) ÅCell parameters from 8235 reflections
b = 9.0632 (3) Åθ = 3.6–35.1°
c = 10.7109 (4) ŵ = 0.29 mm1
α = 71.309 (1)°T = 100 K
β = 76.318 (1)°Plate, colourless
γ = 86.420 (1)°0.57 × 0.20 × 0.07 mm
V = 509.80 (3) Å3
Bruker APEXII CCD diffractometer4093 independent reflections
Radiation source: fine-focus sealed tube3648 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.023
φ and ω scansθmax = 34.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −8→8
Tmin = 0.854, Tmax = 0.979k = −14→14
15442 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.093H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0432P)2 + 0.1608P] where P = (Fo2 + 2Fc2)/3
4093 reflections(Δ/σ)max = 0.001
121 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.44242 (4)0.52051 (3)0.69791 (2)0.02043 (7)
O11.61220 (13)1.04092 (8)0.11132 (7)0.02309 (14)
H1O11.64521.06330.02560.035*
N11.41316 (13)0.94009 (9)0.15010 (7)0.01695 (13)
N21.01528 (13)0.74755 (9)0.45088 (7)0.01587 (13)
N30.81401 (13)0.65358 (9)0.50040 (7)0.01734 (13)
H1N30.74190.62180.45040.021*
N40.82678 (13)0.66298 (9)0.71029 (7)0.01754 (13)
H1N40.96520.70850.66620.021*
C11.41628 (18)0.94145 (12)0.37977 (9)0.02285 (17)
H1A1.58300.97970.34050.034*
H1B1.41110.85180.46130.034*
H1C1.31541.02440.40350.034*
C21.32385 (15)0.89332 (10)0.27889 (8)0.01613 (14)
C31.11201 (15)0.78830 (10)0.32272 (8)0.01645 (14)
C41.02391 (19)0.73958 (13)0.22066 (9)0.0260 (2)
H4A0.96120.63240.26160.039*
H4B1.15760.74530.14250.039*
H4C0.89530.80910.19110.039*
C50.70823 (14)0.61747 (10)0.63536 (8)0.01525 (13)
C60.73697 (16)0.63713 (11)0.85512 (8)0.01993 (15)
H6A0.71650.52400.90360.024*
H6B0.57770.68640.87140.024*
C70.91280 (18)0.70594 (12)0.90870 (10)0.02417 (18)
H7A0.85080.68821.00590.036*
H7B0.93150.81810.86120.036*
H7C1.06960.65590.89360.036*
U11U22U33U12U13U23
S10.01501 (10)0.03141 (12)0.01420 (10)−0.00775 (7)0.00028 (6)−0.00740 (8)
O10.0233 (3)0.0273 (3)0.0159 (3)−0.0142 (2)−0.0004 (2)−0.0031 (2)
N10.0172 (3)0.0177 (3)0.0139 (3)−0.0061 (2)−0.0013 (2)−0.0027 (2)
N20.0154 (3)0.0189 (3)0.0117 (3)−0.0038 (2)−0.0016 (2)−0.0030 (2)
N30.0163 (3)0.0242 (3)0.0109 (3)−0.0066 (2)−0.0010 (2)−0.0050 (2)
N40.0158 (3)0.0247 (3)0.0119 (3)−0.0052 (2)−0.0012 (2)−0.0060 (2)
C10.0260 (4)0.0279 (4)0.0160 (4)−0.0094 (3)−0.0062 (3)−0.0060 (3)
C20.0174 (3)0.0173 (3)0.0129 (3)−0.0041 (2)−0.0032 (2)−0.0032 (3)
C30.0175 (3)0.0197 (3)0.0116 (3)−0.0050 (3)−0.0021 (2)−0.0040 (3)
C40.0287 (4)0.0360 (5)0.0138 (3)−0.0161 (4)−0.0015 (3)−0.0081 (3)
C50.0140 (3)0.0191 (3)0.0117 (3)−0.0020 (2)−0.0017 (2)−0.0040 (3)
C60.0202 (3)0.0278 (4)0.0118 (3)−0.0039 (3)−0.0012 (3)−0.0073 (3)
C70.0253 (4)0.0323 (5)0.0194 (4)−0.0007 (3)−0.0078 (3)−0.0122 (3)
S1—C51.6823 (8)C1—H1B0.9800
O1—N11.4004 (9)C1—H1C0.9800
O1—H1O10.8499C2—C31.4753 (11)
N1—C21.2891 (10)C3—C41.4966 (12)
N2—C31.2913 (10)C4—H4A0.9800
N2—N31.3676 (10)C4—H4B0.9800
N3—C51.3674 (10)C4—H4C0.9800
N3—H1N30.8699C6—C71.5182 (13)
N4—C51.3326 (10)C6—H6A0.9900
N4—C61.4594 (11)C6—H6B0.9900
N4—H1N40.8699C7—H7A0.9800
C1—C21.4955 (12)C7—H7B0.9800
C1—H1A0.9800C7—H7C0.9800
N1—O1—H1O1101.9C3—C4—H4A109.5
C2—N1—O1113.41 (7)C3—C4—H4B109.5
C3—N2—N3118.88 (7)H4A—C4—H4B109.5
C5—N3—N2117.92 (7)C3—C4—H4C109.5
C5—N3—H1N3117.7H4A—C4—H4C109.5
N2—N3—H1N3124.1H4B—C4—H4C109.5
C5—N4—C6123.53 (7)N4—C5—N3116.43 (7)
C5—N4—H1N4114.6N4—C5—S1123.74 (6)
C6—N4—H1N4121.9N3—C5—S1119.83 (6)
C2—C1—H1A109.5N4—C6—C7110.08 (7)
C2—C1—H1B109.5N4—C6—H6A109.6
H1A—C1—H1B109.5C7—C6—H6A109.6
C2—C1—H1C109.5N4—C6—H6B109.6
H1A—C1—H1C109.5C7—C6—H6B109.6
H1B—C1—H1C109.5H6A—C6—H6B108.2
N1—C2—C3114.67 (7)C6—C7—H7A109.5
N1—C2—C1124.68 (7)C6—C7—H7B109.5
C3—C2—C1120.63 (7)H7A—C7—H7B109.5
N2—C3—C2114.69 (7)C6—C7—H7C109.5
N2—C3—C4125.37 (8)H7A—C7—H7C109.5
C2—C3—C4119.93 (7)H7B—C7—H7C109.5
C3—N2—N3—C5−177.16 (8)N1—C2—C3—C42.37 (13)
O1—N1—C2—C3179.32 (7)C1—C2—C3—C4−179.18 (9)
O1—N1—C2—C10.93 (13)C6—N4—C5—N3178.54 (8)
N3—N2—C3—C2178.30 (7)C6—N4—C5—S1−1.47 (13)
N3—N2—C3—C4−0.76 (14)N2—N3—C5—N4−7.33 (12)
N1—C2—C3—N2−176.75 (8)N2—N3—C5—S1172.68 (6)
C1—C2—C3—N21.71 (12)C5—N4—C6—C7−178.86 (8)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···N1i0.852.002.7876 (10)154
N3—H1N3···S1ii0.872.753.6124 (8)171
N4—H1N4···N20.872.172.6055 (10)111
C1—H1A···O10.982.302.6970 (11)103
C4—H4A···S1ii0.982.643.4302 (12)138
C4—H4B···N10.982.392.7636 (14)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1O1⋯N1i 0.852.002.7876 (10)154
N3—H1N3⋯S1ii 0.872.753.6124 (8)171
C4—H4A⋯S1ii 0.982.643.4302 (12)138

Symmetry codes: (i) ; (ii) .

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