Literature DB >> 22346856

Bis{N-ethyl-2-[3-(hy-droxy-imino-κN)butan-2-yl-idene]hydrazinecarbothio-amide-κN,S}nickel(II) dichloride.

Halema Shaban Abduelftah, Amna Qasem Ali, Naser Eltaher Eltayeb, Siang Guan Teoh, Hoong-Kun Fun.   

Abstract

In the title complex, [Ni(C(7)H(14)N(4)OS)(2)]Cl(2), the Ni(II) ion is six-coordinated in a distorted octa-hedral geometry by four N atoms from the two imine and two oxime groups, and two S atoms from the thione groups. Two chloride ions complete the asymmetric unit. In the crystal, mol-ecules are linked through N-H⋯Cl and O-H⋯Cl hydrogen bonds into an infinite chain propagating along [101].

Entities:  

Year:  2012        PMID: 22346856      PMCID: PMC3274909          DOI: 10.1107/S1600536811055383

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For a related structure, see: Choi et al. (2008 ▶). For the biological activity, pharmacological properties and analytical applications of thio­semicarbazones and their metal complexes, see: Cowley et al. (2002 ▶); Ming (2003 ▶); Lobana et al. (2004 ▶, 2007 ▶).

Experimental

Crystal data

[Ni(C7H14N4OS)2]Cl2 M = 534.17 Monoclinic, a = 18.4990 (11) Å b = 14.2097 (9) Å c = 9.2422 (6) Å β = 98.542 (1)° V = 2402.5 (3) Å3 Z = 4 Mo Kα radiation μ = 1.23 mm−1 T = 293 K 0.42 × 0.20 × 0.12 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.625, T max = 0.869 30693 measured reflections 8190 independent reflections 6071 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.089 S = 1.03 8190 reflections 292 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.66 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811055383/is5020sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811055383/is5020Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C7H14N4OS)2]Cl2F(000) = 1112
Mr = 534.17Dx = 1.477 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7955 reflections
a = 18.4990 (11) Åθ = 2.7–31.5°
b = 14.2097 (9) ŵ = 1.23 mm1
c = 9.2422 (6) ÅT = 293 K
β = 98.542 (1)°Block, purple
V = 2402.5 (3) Å30.42 × 0.20 × 0.12 mm
Z = 4
Bruker APEXII CCD diffractometer8190 independent reflections
Radiation source: fine-focus sealed tube6071 reflections with I > 2σ(I)
graphiteRint = 0.030
φ and ω scansθmax = 31.8°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −27→24
Tmin = 0.625, Tmax = 0.869k = −21→19
30693 measured reflectionsl = −12→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.089H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0413P)2 + 0.4822P] where P = (Fo2 + 2Fc2)/3
8190 reflections(Δ/σ)max = 0.001
292 parametersΔρmax = 0.66 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.254705 (10)0.544056 (14)0.720936 (19)0.03000 (6)
S10.19095 (2)0.69236 (3)0.69747 (5)0.04214 (10)
S20.33886 (2)0.59247 (4)0.55926 (4)0.04259 (11)
O10.32326 (8)0.33683 (10)0.76904 (16)0.0528 (3)
O20.15128 (7)0.47332 (11)0.94881 (14)0.0493 (3)
N10.27241 (7)0.39758 (10)0.69614 (14)0.0355 (3)
N20.17389 (7)0.50408 (10)0.56264 (13)0.0318 (3)
N30.12478 (8)0.56856 (10)0.50132 (15)0.0376 (3)
N40.07395 (8)0.71317 (11)0.49656 (17)0.0422 (3)
N50.21534 (7)0.51429 (10)0.92075 (14)0.0345 (3)
N60.33784 (7)0.58110 (9)0.87569 (13)0.0322 (3)
N70.40248 (8)0.61137 (11)0.83749 (15)0.0405 (3)
N80.47653 (9)0.63277 (13)0.66593 (19)0.0510 (4)
C10.17121 (8)0.41842 (12)0.51582 (16)0.0351 (3)
C20.22784 (9)0.35631 (12)0.59529 (17)0.0373 (3)
C30.11569 (11)0.38175 (14)0.39472 (19)0.0484 (4)
H3A0.10580.42880.31990.073*
H3B0.07140.36680.43240.073*
H3C0.13430.32610.35420.073*
C40.23136 (14)0.25422 (14)0.5599 (3)0.0642 (6)
H4A0.26500.22330.63400.096*
H4B0.24770.24680.46670.096*
H4C0.18370.22680.55630.096*
C50.32848 (9)0.58058 (12)1.01105 (16)0.0363 (3)
C60.25807 (9)0.53975 (12)1.03697 (16)0.0360 (3)
C70.38261 (11)0.61688 (17)1.13467 (19)0.0564 (5)
H7A0.40710.67081.10260.085*
H7B0.41780.56871.16620.085*
H7C0.35770.63441.21460.085*
C80.24030 (12)0.52761 (18)1.18843 (19)0.0585 (6)
H8A0.19390.49681.18410.088*
H8B0.23820.58821.23370.088*
H8C0.27750.49011.24480.088*
C90.12641 (8)0.65727 (11)0.55863 (16)0.0336 (3)
C100.06787 (12)0.81258 (14)0.5282 (2)0.0518 (5)
H10A0.11300.84440.51640.062*
H10B0.05960.82080.62860.062*
C110.00570 (14)0.85451 (17)0.4263 (3)0.0682 (6)
H11A0.00350.92100.44380.102*
H11B−0.03930.82570.44290.102*
H11C0.01300.84370.32700.102*
C120.41003 (9)0.61232 (12)0.69315 (17)0.0365 (3)
C130.49817 (12)0.64029 (17)0.5214 (2)0.0592 (5)
H13A0.47890.69800.47470.071*
H13B0.47830.58780.46120.071*
C140.58014 (14)0.64005 (19)0.5352 (3)0.0805 (8)
H14A0.59440.64310.43950.121*
H14B0.59900.58330.58310.121*
H14C0.59940.69350.59160.121*
Cl10.03036 (3)0.42615 (5)0.70489 (5)0.06167 (15)
Cl20.43204 (3)0.39179 (4)1.01970 (8)0.07468 (19)
H1N40.0469 (11)0.6925 (15)0.440 (2)0.043 (6)*
H1O20.1237 (14)0.4674 (16)0.869 (3)0.063 (7)*
H1N70.4416 (12)0.6072 (15)0.903 (2)0.050 (6)*
H1N30.0897 (12)0.5517 (14)0.456 (2)0.046 (6)*
H1O10.3480 (13)0.3666 (16)0.829 (3)0.055 (7)*
H1N80.5085 (13)0.6376 (15)0.742 (2)0.055 (6)*
U11U22U33U12U13U23
Ni10.02577 (10)0.03547 (11)0.02620 (9)−0.00196 (8)−0.00457 (6)−0.00166 (7)
S10.0396 (2)0.0390 (2)0.0418 (2)0.00331 (17)−0.01353 (16)−0.00551 (16)
S20.0354 (2)0.0605 (3)0.03009 (18)−0.00913 (19)−0.00085 (14)0.00010 (17)
O10.0535 (8)0.0468 (8)0.0519 (7)0.0120 (6)−0.0134 (6)−0.0010 (6)
O20.0352 (7)0.0699 (9)0.0409 (6)−0.0168 (6)−0.0004 (5)0.0024 (6)
N10.0325 (7)0.0383 (7)0.0339 (6)0.0037 (5)−0.0007 (5)0.0004 (5)
N20.0265 (6)0.0375 (7)0.0294 (5)−0.0032 (5)−0.0027 (4)−0.0015 (5)
N30.0293 (7)0.0418 (8)0.0367 (7)−0.0015 (6)−0.0116 (5)−0.0021 (5)
N40.0345 (8)0.0467 (8)0.0407 (7)0.0033 (6)−0.0094 (6)0.0010 (6)
N50.0284 (6)0.0406 (7)0.0329 (6)−0.0031 (5)−0.0014 (5)−0.0009 (5)
N60.0267 (6)0.0373 (7)0.0301 (6)−0.0021 (5)−0.0042 (4)−0.0001 (5)
N70.0287 (7)0.0552 (9)0.0345 (6)−0.0070 (6)−0.0062 (5)0.0000 (6)
N80.0317 (8)0.0696 (11)0.0509 (9)−0.0086 (7)0.0035 (6)0.0000 (8)
C10.0299 (8)0.0434 (9)0.0310 (7)−0.0063 (6)0.0010 (5)−0.0059 (6)
C20.0375 (8)0.0375 (8)0.0363 (7)−0.0027 (7)0.0037 (6)−0.0039 (6)
C30.0464 (10)0.0529 (11)0.0416 (8)−0.0103 (8)−0.0073 (7)−0.0127 (8)
C40.0733 (15)0.0421 (11)0.0715 (14)0.0015 (10)−0.0082 (11)−0.0138 (10)
C50.0341 (8)0.0420 (9)0.0293 (6)−0.0019 (7)−0.0070 (6)−0.0018 (6)
C60.0366 (8)0.0408 (8)0.0287 (6)−0.0006 (7)−0.0017 (6)0.0004 (6)
C70.0516 (11)0.0787 (14)0.0341 (8)−0.0182 (10)−0.0090 (7)−0.0095 (9)
C80.0573 (12)0.0867 (16)0.0300 (8)−0.0173 (11)0.0020 (7)0.0016 (9)
C90.0272 (7)0.0411 (8)0.0306 (6)−0.0015 (6)−0.0018 (5)0.0019 (6)
C100.0532 (11)0.0482 (11)0.0497 (10)0.0130 (9)−0.0064 (8)0.0007 (8)
C110.0692 (15)0.0600 (13)0.0677 (13)0.0232 (11)−0.0153 (11)0.0093 (11)
C120.0301 (8)0.0401 (8)0.0379 (7)−0.0024 (6)0.0001 (6)0.0004 (6)
C130.0509 (12)0.0671 (13)0.0637 (12)−0.0074 (10)0.0218 (10)0.0040 (10)
C140.0590 (15)0.0699 (16)0.122 (2)−0.0031 (12)0.0435 (15)−0.0051 (15)
Cl10.0405 (3)0.0975 (4)0.0438 (2)−0.0219 (3)−0.00425 (18)−0.0083 (2)
Cl20.0534 (3)0.0625 (3)0.0937 (4)−0.0016 (3)−0.0363 (3)0.0016 (3)
Ni1—N12.1247 (14)C1—C31.496 (2)
Ni1—N22.0120 (12)C2—C41.491 (3)
Ni1—N52.1258 (13)C3—H3A0.9600
Ni1—N62.0086 (12)C3—H3B0.9600
Ni1—S12.4089 (5)C3—H3C0.9600
Ni1—S22.4126 (5)C4—H4A0.9600
S1—C91.6927 (15)C4—H4B0.9600
S2—C121.6912 (16)C4—H4C0.9600
O1—N11.3769 (18)C5—C61.478 (2)
O1—H1O10.79 (2)C5—C71.495 (2)
O2—N51.3791 (18)C6—C81.495 (2)
O2—H1O20.83 (2)C7—H7A0.9600
N1—C21.290 (2)C7—H7B0.9600
N2—C11.290 (2)C7—H7C0.9600
N2—N31.3538 (19)C8—H8A0.9600
N3—C91.366 (2)C8—H8B0.9600
N3—H1N30.76 (2)C8—H8C0.9600
N4—C91.318 (2)C10—C111.497 (3)
N4—C101.450 (3)C10—H10A0.9700
N4—H1N40.73 (2)C10—H10B0.9700
N5—C61.2873 (19)C11—H11A0.9600
N6—C51.288 (2)C11—H11B0.9600
N6—N71.3656 (19)C11—H11C0.9600
N7—C121.362 (2)C13—C141.503 (3)
N7—H1N70.87 (2)C13—H13A0.9700
N8—C121.324 (2)C13—H13B0.9700
N8—C131.454 (3)C14—H14A0.9600
N8—H1N80.85 (2)C14—H14B0.9600
C1—C21.479 (2)C14—H14C0.9600
N6—Ni1—N2177.98 (5)C2—C4—H4A109.5
N6—Ni1—N1102.68 (5)C2—C4—H4B109.5
N2—Ni1—N175.81 (5)H4A—C4—H4B109.5
N6—Ni1—N576.02 (5)C2—C4—H4C109.5
N2—Ni1—N5105.19 (5)H4A—C4—H4C109.5
N1—Ni1—N588.68 (5)H4B—C4—H4C109.5
N6—Ni1—S198.49 (4)N6—C5—C6114.12 (13)
N2—Ni1—S183.14 (4)N6—C5—C7124.67 (16)
N1—Ni1—S1158.21 (4)C6—C5—C7121.21 (14)
N5—Ni1—S191.49 (4)N5—C6—C5114.95 (13)
N6—Ni1—S282.53 (4)N5—C6—C8123.77 (16)
N2—Ni1—S296.22 (4)C5—C6—C8121.26 (14)
N1—Ni1—S295.08 (4)C5—C7—H7A109.5
N5—Ni1—S2158.53 (4)C5—C7—H7B109.5
S1—Ni1—S292.701 (19)H7A—C7—H7B109.5
C9—S1—Ni195.24 (6)C5—C7—H7C109.5
C12—S2—Ni195.63 (6)H7A—C7—H7C109.5
N1—O1—H1O1107.0 (17)H7B—C7—H7C109.5
N5—O2—H1O2107.9 (17)C6—C8—H8A109.5
C2—N1—O1112.67 (14)C6—C8—H8B109.5
C2—N1—Ni1115.53 (11)H8A—C8—H8B109.5
O1—N1—Ni1131.80 (10)C6—C8—H8C109.5
C1—N2—N3120.53 (13)H8A—C8—H8C109.5
C1—N2—Ni1119.84 (11)H8B—C8—H8C109.5
N3—N2—Ni1119.56 (10)N4—C9—N3114.52 (14)
N2—N3—C9119.17 (12)N4—C9—S1122.91 (13)
N2—N3—H1N3118.9 (16)N3—C9—S1122.57 (12)
C9—N3—H1N3118.3 (16)N4—C10—C11109.65 (17)
C9—N4—C10125.00 (15)N4—C10—H10A109.7
C9—N4—H1N4116.9 (17)C11—C10—H10A109.7
C10—N4—H1N4118.1 (17)N4—C10—H10B109.7
C6—N5—O2113.58 (13)C11—C10—H10B109.7
C6—N5—Ni1114.95 (11)H10A—C10—H10B108.2
O2—N5—Ni1131.47 (10)C10—C11—H11A109.5
C5—N6—N7120.14 (13)C10—C11—H11B109.5
C5—N6—Ni1119.40 (11)H11A—C11—H11B109.5
N7—N6—Ni1120.38 (9)C10—C11—H11C109.5
C12—N7—N6118.52 (13)H11A—C11—H11C109.5
C12—N7—H1N7118.8 (14)H11B—C11—H11C109.5
N6—N7—H1N7118.0 (14)N8—C12—N7114.94 (15)
C12—N8—C13125.52 (17)N8—C12—S2122.81 (13)
C12—N8—H1N8114.4 (15)N7—C12—S2122.22 (12)
C13—N8—H1N8119.9 (15)N8—C13—C14109.5 (2)
N2—C1—C2114.04 (13)N8—C13—H13A109.8
N2—C1—C3124.57 (15)C14—C13—H13A109.8
C2—C1—C3121.38 (15)N8—C13—H13B109.8
N1—C2—C1114.65 (14)C14—C13—H13B109.8
N1—C2—C4123.84 (17)H13A—C13—H13B108.2
C1—C2—C4121.51 (15)C13—C14—H14A109.5
C1—C3—H3A109.5C13—C14—H14B109.5
C1—C3—H3B109.5H14A—C14—H14B109.5
H3A—C3—H3B109.5C13—C14—H14C109.5
C1—C3—H3C109.5H14A—C14—H14C109.5
H3A—C3—H3C109.5H14B—C14—H14C109.5
H3B—C3—H3C109.5
N6—Ni1—S1—C9176.16 (7)N1—Ni1—N6—N791.00 (12)
N2—Ni1—S1—C9−2.63 (6)N5—Ni1—N6—N7176.39 (13)
N1—Ni1—S1—C9−17.59 (12)S1—Ni1—N6—N7−94.19 (12)
N5—Ni1—S1—C9−107.75 (6)S2—Ni1—N6—N7−2.56 (11)
S2—Ni1—S1—C993.31 (6)C5—N6—N7—C12−179.00 (16)
N6—Ni1—S2—C125.33 (7)Ni1—N6—N7—C12−2.5 (2)
N2—Ni1—S2—C12−173.07 (7)N3—N2—C1—C2−179.18 (14)
N1—Ni1—S2—C12−96.83 (7)Ni1—N2—C1—C24.00 (18)
N5—Ni1—S2—C122.54 (13)N3—N2—C1—C3−0.5 (2)
S1—Ni1—S2—C12103.55 (6)Ni1—N2—C1—C3−177.35 (13)
N6—Ni1—N1—C2−176.40 (12)O1—N1—C2—C1178.83 (13)
N2—Ni1—N1—C22.22 (11)Ni1—N1—C2—C1−0.92 (18)
N5—Ni1—N1—C2108.25 (12)O1—N1—C2—C4−0.7 (3)
S1—Ni1—N1—C217.54 (19)Ni1—N1—C2—C4179.55 (16)
S2—Ni1—N1—C2−92.93 (12)N2—C1—C2—N1−1.9 (2)
N6—Ni1—N1—O13.91 (15)C3—C1—C2—N1179.44 (15)
N2—Ni1—N1—O1−177.48 (15)N2—C1—C2—C4177.68 (18)
N5—Ni1—N1—O1−71.44 (15)C3—C1—C2—C4−1.0 (3)
S1—Ni1—N1—O1−162.15 (10)N7—N6—C5—C6−175.83 (14)
S2—Ni1—N1—O187.38 (14)Ni1—N6—C5—C67.6 (2)
N1—Ni1—N2—C1−3.45 (12)N7—N6—C5—C73.9 (3)
N5—Ni1—N2—C1−88.10 (12)Ni1—N6—C5—C7−172.64 (15)
S1—Ni1—N2—C1−177.77 (12)O2—N5—C6—C5177.75 (14)
S2—Ni1—N2—C190.24 (12)Ni1—N5—C6—C5−3.03 (19)
N1—Ni1—N2—N3179.70 (12)O2—N5—C6—C8−0.7 (2)
N5—Ni1—N2—N395.05 (12)Ni1—N5—C6—C8178.50 (15)
S1—Ni1—N2—N35.37 (11)N6—C5—C6—N5−2.7 (2)
S2—Ni1—N2—N3−86.61 (11)C7—C5—C6—N5177.58 (17)
C1—N2—N3—C9176.31 (14)N6—C5—C6—C8175.84 (17)
Ni1—N2—N3—C9−6.9 (2)C7—C5—C6—C8−3.9 (3)
N6—Ni1—N5—C65.21 (12)C10—N4—C9—N3−173.91 (17)
N2—Ni1—N5—C6−176.46 (12)C10—N4—C9—S15.8 (3)
N1—Ni1—N5—C6108.63 (12)N2—N3—C9—N4−176.40 (14)
S1—Ni1—N5—C6−93.17 (12)N2—N3—C9—S13.9 (2)
S2—Ni1—N5—C68.1 (2)Ni1—S1—C9—N4−179.39 (14)
N6—Ni1—N5—O2−175.74 (15)Ni1—S1—C9—N30.27 (14)
N2—Ni1—N5—O22.59 (15)C9—N4—C10—C11174.47 (19)
N1—Ni1—N5—O2−72.32 (14)C13—N8—C12—N7−178.54 (19)
S1—Ni1—N5—O285.88 (14)C13—N8—C12—S2−0.6 (3)
S2—Ni1—N5—O2−172.89 (10)N6—N7—C12—N8−173.06 (16)
N1—Ni1—N6—C5−92.46 (13)N6—N7—C12—S28.9 (2)
N5—Ni1—N6—C5−7.07 (12)Ni1—S2—C12—N8173.07 (15)
S1—Ni1—N6—C582.35 (13)Ni1—S2—C12—N7−9.10 (15)
S2—Ni1—N6—C5173.99 (13)C12—N8—C13—C14−165.8 (2)
D—H···AD—HH···AD···AD—H···A
N4—H1N4···Cl1i0.730 (19)2.47 (2)3.1689 (17)161 (2)
O2—H1O2···Cl10.84 (3)2.20 (3)3.0062 (14)161 (2)
N7—H1N7···Cl2ii0.87 (2)2.34 (2)3.1488 (16)153.9 (17)
N3—H1N3···Cl1i0.76 (2)2.50 (2)3.2015 (16)154 (2)
O1—H1O1···Cl20.79 (3)2.20 (3)2.9396 (16)157 (2)
N8—H1N8···Cl2ii0.85 (2)2.349 (19)3.1567 (19)159 (2)
Table 1

Selected bond lengths (Å)

Ni1—N12.1247 (14)
Ni1—N22.0120 (12)
Ni1—N52.1258 (13)
Ni1—N62.0086 (12)
Ni1—S12.4089 (5)
Ni1—S22.4126 (5)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H1N4⋯Cl1i0.730 (19)2.47 (2)3.1689 (17)161 (2)
O2—H1O2⋯Cl10.84 (3)2.20 (3)3.0062 (14)161 (2)
N7—H1N7⋯Cl2ii0.87 (2)2.34 (2)3.1488 (16)153.9 (17)
N3—H1N3⋯Cl1i0.76 (2)2.50 (2)3.2015 (16)154 (2)
O1—H1O1⋯Cl20.79 (3)2.20 (3)2.9396 (16)157 (2)
N8—H1N8⋯Cl2ii0.85 (2)2.349 (19)3.1567 (19)159 (2)

Symmetry codes: (i) ; (ii) .

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