Literature DB >> 22904967

N-[4-Chloro-3-(trifluoro-meth-yl)phen-yl]-2,2-dimethyl-propanamide.

Yu Zhou1, Lili Ren, Yongyu Lu, Feng Zhang, Guoguang Chen.   

Abstract

In the title compound, C(12)H(13)ClF(3)NO, the C-C-N-C torsion angle between the benzene ring and the pivaloyl group is -33.9 (5)°. In the crystal, molecules are linked via N-H⋯O hydrogen bonds to form chains running parallel to the c axis. Weak van der Waals inter-actions are also observed.

Entities:  

Year:  2012        PMID: 22904967      PMCID: PMC3414980          DOI: 10.1107/S1600536812031650

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on related compounds, see: Rosenblum et al. (1998 ▶); Wang et al. (2009 ▶). For a related crystal structure, see: Zhu et al. (2007 ▶).

Experimental

Crystal data

C12H13ClF3NO M = 279.68 Monoclinic, a = 5.8850 (12) Å b = 21.955 (4) Å c = 10.307 (2) Å β = 104.50 (3)° V = 1289.3 (5) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.910, T max = 0.969 2599 measured reflections 2364 independent reflections 1477 reflections with I > 2σ(I) R int = 0.052 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.192 S = 1.00 2364 reflections 163 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.38 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812031650/pk2427sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031650/pk2427Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812031650/pk2427Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13ClF3NOF(000) = 576
Mr = 279.68Dx = 1.441 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 5.8850 (12) Åθ = 10–13°
b = 21.955 (4) ŵ = 0.32 mm1
c = 10.307 (2) ÅT = 293 K
β = 104.50 (3)°Block, colorless
V = 1289.3 (5) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1477 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.052
Graphite monochromatorθmax = 25.4°, θmin = 1.9°
ω/2θ scansh = 0→7
Absorption correction: ψ scan (North et al., 1968)k = 0→26
Tmin = 0.910, Tmax = 0.969l = −12→12
2599 measured reflections3 standard reflections every 200 reflections
2364 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.192H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.1P)2 + 0.6P] where P = (Fo2 + 2Fc2)/3
2364 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.38 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.8303 (2)0.49337 (6)0.12942 (14)0.0873 (5)
O0.1944 (5)0.25926 (12)0.2729 (2)0.0647 (8)
N0.2134 (5)0.27644 (13)0.0605 (3)0.0494 (7)
H0A0.16320.2645−0.02110.059*
F10.7046 (6)0.47123 (13)0.3967 (3)0.1021 (10)
C10.4957 (8)0.46500 (17)0.3095 (4)0.0639 (11)
F20.3471 (6)0.44832 (12)0.3808 (3)0.1073 (11)
C20.5006 (6)0.42126 (16)0.1992 (3)0.0483 (9)
F30.4298 (5)0.52091 (10)0.2663 (3)0.0797 (8)
C30.3567 (6)0.37039 (15)0.1826 (3)0.0474 (9)
H3A0.25760.36430.23890.057*
C40.3598 (6)0.32856 (15)0.0826 (3)0.0444 (8)
C50.5033 (7)0.33915 (17)−0.0024 (3)0.0540 (9)
H5A0.50240.3120−0.07180.065*
C60.6482 (7)0.38958 (19)0.0147 (4)0.0623 (11)
H6A0.74680.3957−0.04200.075*
C70.6471 (6)0.43065 (17)0.1149 (4)0.0542 (9)
C80.1439 (6)0.24321 (15)0.1556 (3)0.0442 (8)
C90.0085 (6)0.18476 (15)0.1083 (3)0.0463 (8)
C100.1853 (9)0.1369 (2)0.0953 (7)0.107 (2)
H10A0.29840.13210.17980.161*
H10B0.26380.14930.02840.161*
H10C0.10630.09890.06940.161*
C11−0.1150 (11)0.1652 (3)0.2130 (5)0.110 (2)
H11A−0.00220.16050.29760.165*
H11B−0.19310.12700.18720.165*
H11C−0.22830.19550.22100.165*
C12−0.1714 (9)0.1921 (2)−0.0249 (5)0.0984 (18)
H12A−0.09380.2042−0.09230.148*
H12B−0.28380.2226−0.01660.148*
H12C−0.25040.1540−0.05000.148*
U11U22U33U12U13U23
Cl0.0823 (8)0.0705 (8)0.1155 (10)−0.0271 (6)0.0370 (7)−0.0055 (7)
O0.107 (2)0.0532 (16)0.0354 (13)−0.0215 (15)0.0202 (13)−0.0028 (11)
N0.074 (2)0.0427 (16)0.0316 (13)−0.0087 (14)0.0141 (13)−0.0051 (12)
F10.136 (3)0.078 (2)0.0703 (16)0.0004 (17)−0.0147 (17)−0.0234 (14)
C10.095 (3)0.043 (2)0.055 (2)−0.011 (2)0.021 (2)−0.0062 (18)
F20.196 (3)0.0666 (17)0.0886 (18)−0.0380 (19)0.090 (2)−0.0322 (14)
C20.062 (2)0.0390 (19)0.0420 (18)0.0023 (16)0.0098 (16)0.0041 (15)
F30.105 (2)0.0383 (13)0.0994 (18)0.0013 (12)0.0319 (15)−0.0087 (12)
C30.068 (2)0.0380 (19)0.0395 (17)−0.0036 (16)0.0199 (16)0.0009 (14)
C40.060 (2)0.0382 (18)0.0355 (17)0.0003 (15)0.0126 (15)0.0012 (14)
C50.074 (2)0.046 (2)0.0458 (19)0.0035 (18)0.0225 (18)−0.0040 (16)
C60.070 (3)0.060 (2)0.067 (2)−0.004 (2)0.035 (2)0.002 (2)
C70.058 (2)0.043 (2)0.061 (2)−0.0044 (17)0.0159 (18)0.0035 (18)
C80.060 (2)0.0380 (18)0.0351 (18)0.0023 (15)0.0136 (15)0.0013 (14)
C90.057 (2)0.0368 (18)0.0441 (18)−0.0022 (15)0.0118 (15)0.0005 (15)
C100.082 (3)0.048 (3)0.186 (6)0.002 (2)0.021 (4)−0.032 (3)
C110.144 (5)0.113 (4)0.088 (3)−0.075 (4)0.056 (3)−0.027 (3)
C120.106 (4)0.073 (3)0.090 (3)−0.028 (3)−0.026 (3)0.009 (3)
Cl—C71.732 (4)C6—C71.372 (5)
O—C81.222 (4)C6—H6A0.9300
N—C81.364 (4)C8—C91.525 (5)
N—C41.416 (4)C9—C111.506 (6)
N—H0A0.8600C9—C101.508 (6)
F1—C11.336 (5)C9—C121.518 (5)
C1—F21.326 (5)C10—H10A0.9600
C1—F31.330 (4)C10—H10B0.9600
C1—C21.494 (5)C10—H10C0.9600
C2—C71.385 (5)C11—H11A0.9600
C2—C31.386 (5)C11—H11B0.9600
C3—C41.384 (4)C11—H11C0.9600
C3—H3A0.9300C12—H12A0.9600
C4—C51.379 (5)C12—H12B0.9600
C5—C61.382 (5)C12—H12C0.9600
C5—H5A0.9300
C8—N—C4126.6 (3)O—C8—N120.9 (3)
C8—N—H0A116.7O—C8—C9122.5 (3)
C4—N—H0A116.7N—C8—C9116.6 (3)
F2—C1—F3105.3 (4)C11—C9—C10109.4 (4)
F2—C1—F1106.2 (3)C11—C9—C12109.0 (4)
F3—C1—F1105.8 (3)C10—C9—C12109.5 (4)
F2—C1—C2112.6 (3)C11—C9—C8108.6 (3)
F3—C1—C2113.4 (3)C10—C9—C8107.3 (3)
F1—C1—C2112.8 (4)C12—C9—C8113.0 (3)
C7—C2—C3119.9 (3)C9—C10—H10A109.5
C7—C2—C1121.1 (3)C9—C10—H10B109.5
C3—C2—C1119.0 (3)H10A—C10—H10B109.5
C4—C3—C2120.4 (3)C9—C10—H10C109.5
C4—C3—H3A119.8H10A—C10—H10C109.5
C2—C3—H3A119.8H10B—C10—H10C109.5
C5—C4—C3119.0 (3)C9—C11—H11A109.5
C5—C4—N118.6 (3)C9—C11—H11B109.5
C3—C4—N122.3 (3)H11A—C11—H11B109.5
C4—C5—C6120.7 (3)C9—C11—H11C109.5
C4—C5—H5A119.6H11A—C11—H11C109.5
C6—C5—H5A119.6H11B—C11—H11C109.5
C7—C6—C5120.2 (3)C9—C12—H12A109.5
C7—C6—H6A119.9C9—C12—H12B109.5
C5—C6—H6A119.9H12A—C12—H12B109.5
C6—C7—C2119.7 (3)C9—C12—H12C109.5
C6—C7—Cl117.8 (3)H12A—C12—H12C109.5
C2—C7—Cl122.4 (3)H12B—C12—H12C109.5
F2—C1—C2—C7−179.3 (4)C5—C6—C7—C20.2 (6)
F3—C1—C2—C761.3 (5)C5—C6—C7—Cl−179.2 (3)
F1—C1—C2—C7−59.1 (5)C3—C2—C7—C60.3 (5)
F2—C1—C2—C30.2 (5)C1—C2—C7—C6179.8 (4)
F3—C1—C2—C3−119.2 (4)C3—C2—C7—Cl179.7 (3)
F1—C1—C2—C3120.5 (4)C1—C2—C7—Cl−0.8 (5)
C7—C2—C3—C40.5 (5)C4—N—C8—O4.8 (5)
C1—C2—C3—C4−179.0 (3)C4—N—C8—C9−173.3 (3)
C2—C3—C4—C5−1.8 (5)O—C8—C9—C1119.1 (5)
C2—C3—C4—N−179.0 (3)N—C8—C9—C11−162.8 (4)
C8—N—C4—C5148.6 (3)O—C8—C9—C10−99.1 (5)
C8—N—C4—C3−34.1 (5)N—C8—C9—C1079.0 (4)
C3—C4—C5—C62.3 (5)O—C8—C9—C12140.2 (4)
N—C4—C5—C6179.6 (3)N—C8—C9—C12−41.7 (5)
C4—C5—C6—C7−1.5 (6)
D—H···AD—HH···AD···AD—H···A
N—H0A···O0.862.243.041 (4)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N—H0A⋯O0.862.243.041 (4)155
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Azetidinone derivatives: design, synthesis and evaluation of cholesterol absorption inhibitors.

Authors:  Yubin Wang; Huibin Zhang; Wenlong Huang; Jing Kong; Jinpei Zhou; Beibei Zhang
Journal:  Eur J Med Chem       Date:  2008-10-07       Impact factor: 6.514

3.  Discovery of 1-(4-fluorophenyl)-(3R)-[3-(4-fluorophenyl)-(3S)-hydroxypropyl]-(4S)-(4 -hydroxyphenyl)-2-azetidinone (SCH 58235): a designed, potent, orally active inhibitor of cholesterol absorption.

Authors:  S B Rosenblum; T Huynh; A Afonso; H R Davis; N Yumibe; J W Clader; D A Burnett
Journal:  J Med Chem       Date:  1998-03-12       Impact factor: 7.446

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.