| Literature DB >> 22904903 |
Hoong-Kun Fun, Ching Kheng Quah, Prakash S Nayak, B Narayana, B K Sarojini.
Abstract
The asymmetric unit of the title compound, C(7)H(6)F(2)N(2)S, consists of two independent mol-ecules, with comparable geometries. In one mol-ecule, the thio-urea moiety is essentially planar (r.m.s. deviation = 0.014 Å) and it forms a dihedral angle of 78.67 (9)° with the benzene ring. The corresponding r.m.s. deviation and dihedral angle for the other mol-ecule are 0.011 Å and 81.71 (8)°, respectively. In both mol-ecules, one of the F atoms is disordered over two positions with refined site occupancies of 0.572 (3):0.428 (3) and 0.909 (2):0.091 (2), respectively. In the crystal, mol-ecules are linked via N-H⋯S and C-H⋯F hydrogen bonds into two-dimensional networks parallel to (010).Entities:
Year: 2012 PMID: 22904903 PMCID: PMC3414916 DOI: 10.1107/S1600536812031625
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C7H6F2N2S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5197 reflections |
| θ = 3.2–32.0° | |
| µ = 0.39 mm−1 | |
| β = 100.464 (2)° | Plate, colourless |
| 0.36 × 0.14 × 0.09 mm | |
| Bruker SMART APEXII DUO CCD area-detector diffractometer | 3553 independent reflections |
| Radiation source: fine-focus sealed tube | 3082 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.5°, θmin = 1.1° |
| Absorption correction: multi-scan ( | |
| 13654 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3553 reflections | (Δ/σ)max = 0.001 |
| 255 parameters | Δρmax = 0.55 e Å−3 |
| 4 restraints | Δρmin = −0.36 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| F1A | 0.9955 (3) | 0.14057 (5) | 0.6462 (3) | 0.0235 (5) | 0.572 (3) |
| F1AX | 0.4561 (4) | 0.21131 (7) | 0.3297 (4) | 0.0259 (7) | 0.428 (3) |
| F2A | 1.13116 (19) | 0.26104 (3) | 0.46796 (18) | 0.0356 (3) | |
| S1A | 0.59786 (6) | 0.167502 (10) | 0.91274 (6) | 0.01619 (10) | |
| N1A | 0.5812 (2) | 0.14793 (4) | 0.5240 (2) | 0.0209 (3) | |
| N2A | 0.4287 (3) | 0.10890 (4) | 0.7173 (3) | 0.0227 (3) | |
| C1A | 0.9376 (3) | 0.17296 (5) | 0.5676 (3) | 0.0223 (4) | |
| H1AA | 0.9899 | 0.1505 | 0.6251 | 0.027* | 0.428 (3) |
| C2A | 1.0788 (3) | 0.20077 (5) | 0.5578 (3) | 0.0240 (4) | |
| H2AA | 1.2258 | 0.1980 | 0.6090 | 0.029* | |
| C3A | 0.9968 (3) | 0.23273 (5) | 0.4704 (3) | 0.0227 (4) | |
| C4A | 0.7859 (3) | 0.23758 (5) | 0.3885 (3) | 0.0221 (4) | |
| H4AA | 0.7357 | 0.2597 | 0.3246 | 0.027* | |
| C5A | 0.6497 (3) | 0.20898 (5) | 0.4030 (3) | 0.0207 (4) | |
| H5AA | 0.5035 | 0.2116 | 0.3475 | 0.025* | 0.572 (3) |
| C6A | 0.7219 (3) | 0.17666 (4) | 0.4967 (3) | 0.0193 (3) | |
| C7A | 0.5343 (2) | 0.13960 (4) | 0.7068 (3) | 0.0167 (3) | |
| F1B | −0.1368 (2) | 0.05450 (3) | −0.13223 (17) | 0.0289 (3) | 0.909 (2) |
| F1BX | −0.1259 (12) | 0.0838 (3) | 0.5203 (17) | 0.0289 (3) | 0.091 (2) |
| F2B | −0.33235 (18) | −0.03440 (3) | 0.29943 (18) | 0.0313 (3) | |
| S1B | 0.32399 (6) | 0.086866 (11) | 0.19944 (6) | 0.01690 (10) | |
| N1B | −0.0833 (2) | 0.10552 (4) | 0.1680 (2) | 0.0178 (3) | |
| N2B | 0.1372 (3) | 0.15004 (4) | 0.0948 (2) | 0.0204 (3) | |
| C1B | −0.1715 (2) | 0.04402 (5) | 0.0510 (3) | 0.0195 (3) | |
| H1BA | −0.1484 | 0.0513 | −0.0796 | 0.023* | 0.091 (2) |
| C2B | −0.2367 (2) | 0.00890 (5) | 0.0765 (3) | 0.0207 (3) | |
| H2BA | −0.2598 | −0.0080 | −0.0327 | 0.025* | |
| C3B | −0.2663 (2) | −0.00024 (4) | 0.2694 (3) | 0.0201 (3) | |
| C4B | −0.2367 (3) | 0.02342 (5) | 0.4308 (3) | 0.0226 (4) | |
| H4BA | −0.2606 | 0.0161 | 0.5610 | 0.027* | |
| C5B | −0.1706 (3) | 0.05838 (5) | 0.3979 (3) | 0.0205 (3) | |
| H5BA | −0.1474 | 0.0752 | 0.5074 | 0.025* | 0.909 (2) |
| C6B | −0.1382 (2) | 0.06909 (4) | 0.2074 (3) | 0.0163 (3) | |
| C7B | 0.1138 (3) | 0.11572 (4) | 0.1495 (2) | 0.0157 (3) | |
| H1NA | 0.538 (3) | 0.1354 (5) | 0.429 (3) | 0.018 (5)* | |
| H2NA | 0.390 (3) | 0.0967 (6) | 0.617 (4) | 0.026 (6)* | |
| H3NA | 0.396 (3) | 0.1029 (5) | 0.831 (3) | 0.020 (5)* | |
| H1NB | −0.190 (3) | 0.1202 (6) | 0.124 (3) | 0.024 (5)* | |
| H2NB | 0.028 (3) | 0.1640 (6) | 0.052 (3) | 0.026 (5)* | |
| H3NB | 0.249 (4) | 0.1570 (6) | 0.067 (3) | 0.025 (6)* |
| F1A | 0.0242 (9) | 0.0180 (9) | 0.0258 (10) | 0.0068 (7) | −0.0019 (7) | 0.0057 (7) |
| F1AX | 0.0195 (12) | 0.0277 (14) | 0.0287 (14) | 0.0035 (9) | 0.0000 (10) | 0.0036 (11) |
| F2A | 0.0395 (6) | 0.0311 (6) | 0.0365 (7) | −0.0152 (5) | 0.0080 (5) | 0.0054 (5) |
| S1A | 0.01840 (19) | 0.01375 (19) | 0.0162 (2) | −0.00093 (14) | 0.00254 (15) | −0.00129 (15) |
| N1A | 0.0306 (8) | 0.0157 (7) | 0.0157 (7) | −0.0058 (6) | 0.0022 (6) | −0.0030 (6) |
| N2A | 0.0322 (8) | 0.0169 (7) | 0.0195 (8) | −0.0079 (6) | 0.0057 (7) | −0.0034 (6) |
| C1A | 0.0331 (9) | 0.0172 (8) | 0.0179 (8) | 0.0043 (7) | 0.0081 (7) | 0.0019 (7) |
| C2A | 0.0246 (9) | 0.0289 (9) | 0.0195 (9) | 0.0003 (7) | 0.0072 (7) | 0.0013 (7) |
| C3A | 0.0323 (9) | 0.0200 (8) | 0.0180 (8) | −0.0069 (7) | 0.0101 (7) | −0.0009 (7) |
| C4A | 0.0350 (9) | 0.0161 (8) | 0.0162 (8) | 0.0014 (7) | 0.0070 (7) | 0.0025 (7) |
| C5A | 0.0277 (9) | 0.0205 (8) | 0.0136 (8) | 0.0010 (7) | 0.0025 (7) | −0.0015 (7) |
| C6A | 0.0297 (9) | 0.0151 (8) | 0.0137 (8) | −0.0027 (6) | 0.0060 (7) | −0.0024 (6) |
| C7A | 0.0167 (7) | 0.0144 (7) | 0.0180 (8) | 0.0028 (6) | 0.0006 (6) | −0.0005 (6) |
| F1B | 0.0454 (7) | 0.0278 (6) | 0.0145 (6) | −0.0080 (5) | 0.0084 (5) | −0.0017 (5) |
| F1BX | 0.0454 (7) | 0.0278 (6) | 0.0145 (6) | −0.0080 (5) | 0.0084 (5) | −0.0017 (5) |
| F2B | 0.0443 (7) | 0.0172 (5) | 0.0334 (6) | −0.0111 (5) | 0.0098 (5) | 0.0002 (5) |
| S1B | 0.01641 (18) | 0.01577 (19) | 0.0178 (2) | 0.00075 (14) | 0.00125 (15) | −0.00053 (16) |
| N1B | 0.0161 (7) | 0.0138 (7) | 0.0231 (7) | 0.0012 (5) | 0.0029 (6) | 0.0021 (6) |
| N2B | 0.0190 (7) | 0.0161 (7) | 0.0265 (8) | 0.0003 (6) | 0.0053 (6) | 0.0039 (6) |
| C1B | 0.0200 (8) | 0.0221 (8) | 0.0171 (8) | −0.0005 (6) | 0.0050 (6) | 0.0015 (7) |
| C2B | 0.0230 (8) | 0.0189 (8) | 0.0205 (8) | −0.0031 (6) | 0.0044 (7) | −0.0052 (7) |
| C3B | 0.0203 (8) | 0.0143 (8) | 0.0255 (9) | −0.0026 (6) | 0.0034 (7) | 0.0014 (7) |
| C4B | 0.0285 (9) | 0.0215 (9) | 0.0176 (8) | −0.0020 (7) | 0.0034 (7) | 0.0022 (7) |
| C5B | 0.0236 (8) | 0.0185 (8) | 0.0181 (8) | 0.0002 (6) | 0.0003 (7) | −0.0028 (7) |
| C6B | 0.0125 (7) | 0.0137 (7) | 0.0224 (9) | 0.0004 (6) | 0.0020 (6) | 0.0002 (6) |
| C7B | 0.0197 (8) | 0.0166 (8) | 0.0104 (7) | −0.0011 (6) | 0.0020 (6) | −0.0022 (6) |
| F1A—C1A | 1.331 (2) | F1B—C1B | 1.341 (2) |
| F1AX—C5A | 1.254 (3) | F1BX—C5B | 1.242 (12) |
| F2A—C3A | 1.3572 (19) | F2B—C3B | 1.3567 (19) |
| S1A—C7A | 1.7079 (17) | S1B—C7B | 1.7049 (16) |
| N1A—C7A | 1.346 (2) | N1B—C7B | 1.348 (2) |
| N1A—C6A | 1.427 (2) | N1B—C6B | 1.427 (2) |
| N1A—H1NA | 0.79 (2) | N1B—H1NB | 0.88 (2) |
| N2A—C7A | 1.329 (2) | N2B—C7B | 1.334 (2) |
| N2A—H2NA | 0.81 (2) | N2B—H2NB | 0.88 (2) |
| N2A—H3NA | 0.85 (2) | N2B—H3NB | 0.82 (2) |
| C1A—C2A | 1.379 (3) | C1B—C2B | 1.382 (2) |
| C1A—C6A | 1.387 (3) | C1B—C6B | 1.383 (2) |
| C1A—H1AA | 0.9500 | C1B—H1BA | 0.9500 |
| C2A—C3A | 1.377 (3) | C2B—C3B | 1.378 (3) |
| C2A—H2AA | 0.9500 | C2B—H2BA | 0.9500 |
| C3A—C4A | 1.379 (3) | C3B—C4B | 1.374 (2) |
| C4A—C5A | 1.386 (2) | C4B—C5B | 1.389 (2) |
| C4A—H4AA | 0.9500 | C4B—H4BA | 0.9500 |
| C5A—C6A | 1.387 (2) | C5B—C6B | 1.384 (2) |
| C5A—H5AA | 0.9500 | C5B—H5BA | 0.9500 |
| C7A—N1A—C6A | 122.52 (15) | C7B—N1B—C6B | 123.25 (14) |
| C7A—N1A—H1NA | 119.4 (15) | C7B—N1B—H1NB | 118.8 (14) |
| C6A—N1A—H1NA | 117.9 (15) | C6B—N1B—H1NB | 116.1 (13) |
| C7A—N2A—H2NA | 121.1 (16) | C7B—N2B—H2NB | 121.6 (14) |
| C7A—N2A—H3NA | 118.6 (14) | C7B—N2B—H3NB | 120.5 (15) |
| H2NA—N2A—H3NA | 120 (2) | H2NB—N2B—H3NB | 115 (2) |
| F1A—C1A—C2A | 123.22 (18) | F1B—C1B—C2B | 119.17 (15) |
| F1A—C1A—C6A | 114.43 (17) | F1B—C1B—C6B | 117.95 (15) |
| C2A—C1A—C6A | 122.35 (16) | C2B—C1B—C6B | 122.88 (16) |
| C2A—C1A—H1AA | 118.8 | C2B—C1B—H1BA | 118.6 |
| C6A—C1A—H1AA | 118.8 | C6B—C1B—H1BA | 118.6 |
| C3A—C2A—C1A | 116.96 (17) | C3B—C2B—C1B | 116.17 (16) |
| C3A—C2A—H2AA | 121.5 | C3B—C2B—H2BA | 121.9 |
| C1A—C2A—H2AA | 121.5 | C1B—C2B—H2BA | 121.9 |
| F2A—C3A—C2A | 117.99 (16) | F2B—C3B—C4B | 118.46 (16) |
| F2A—C3A—C4A | 118.49 (16) | F2B—C3B—C2B | 117.77 (15) |
| C2A—C3A—C4A | 123.51 (17) | C4B—C3B—C2B | 123.76 (16) |
| C3A—C4A—C5A | 117.47 (16) | C3B—C4B—C5B | 117.95 (16) |
| C3A—C4A—H4AA | 121.3 | C3B—C4B—H4BA | 121.0 |
| C5A—C4A—H4AA | 121.3 | C5B—C4B—H4BA | 121.0 |
| F1AX—C5A—C4A | 120.96 (19) | F1BX—C5B—C6B | 109.6 (6) |
| F1AX—C5A—C6A | 117.52 (19) | F1BX—C5B—C4B | 129.6 (6) |
| C4A—C5A—C6A | 121.52 (17) | C6B—C5B—C4B | 120.84 (16) |
| C4A—C5A—H5AA | 119.2 | C6B—C5B—H5BA | 119.6 |
| C6A—C5A—H5AA | 119.2 | C4B—C5B—H5BA | 119.6 |
| C5A—C6A—C1A | 118.07 (16) | C1B—C6B—C5B | 118.40 (15) |
| C5A—C6A—N1A | 121.93 (16) | C1B—C6B—N1B | 120.01 (15) |
| C1A—C6A—N1A | 120.00 (15) | C5B—C6B—N1B | 121.51 (15) |
| N2A—C7A—N1A | 116.32 (16) | N2B—C7B—N1B | 116.42 (15) |
| N2A—C7A—S1A | 121.39 (14) | N2B—C7B—S1B | 121.45 (13) |
| N1A—C7A—S1A | 122.25 (13) | N1B—C7B—S1B | 122.11 (12) |
| F1A—C1A—C2A—C3A | 179.30 (18) | F1B—C1B—C2B—C3B | 179.05 (14) |
| C6A—C1A—C2A—C3A | −1.0 (3) | C6B—C1B—C2B—C3B | −0.44 (14) |
| C1A—C2A—C3A—F2A | 176.87 (16) | C1B—C2B—C3B—F2B | 179.36 (14) |
| C1A—C2A—C3A—C4A | −2.1 (3) | C1B—C2B—C3B—C4B | 0.66 (15) |
| F2A—C3A—C4A—C5A | −176.43 (15) | F2B—C3B—C4B—C5B | −179.51 (14) |
| C2A—C3A—C4A—C5A | 2.5 (3) | C2B—C3B—C4B—C5B | −0.8 (2) |
| C3A—C4A—C5A—F1AX | −179.1 (2) | C3B—C4B—C5B—F1BX | −176.9 (4) |
| C3A—C4A—C5A—C6A | 0.2 (3) | C3B—C4B—C5B—C6B | 0.7 (2) |
| F1AX—C5A—C6A—C1A | 176.2 (2) | F1B—C1B—C6B—C5B | −179.09 (14) |
| C4A—C5A—C6A—C1A | −3.1 (3) | C2B—C1B—C6B—C5B | 0.4 (2) |
| F1AX—C5A—C6A—N1A | −4.8 (3) | F1B—C1B—C6B—N1B | 4.3 (2) |
| C4A—C5A—C6A—N1A | 175.88 (16) | C2B—C1B—C6B—N1B | −176.21 (13) |
| F1A—C1A—C6A—C5A | −176.79 (16) | F1BX—C5B—C6B—C1B | 177.5 (4) |
| C2A—C1A—C6A—C5A | 3.5 (3) | C4B—C5B—C6B—C1B | −0.6 (2) |
| F1A—C1A—C6A—N1A | 4.3 (2) | F1BX—C5B—C6B—N1B | −5.9 (4) |
| C2A—C1A—C6A—N1A | −175.43 (16) | C4B—C5B—C6B—N1B | 176.01 (15) |
| C7A—N1A—C6A—C5A | −107.0 (2) | C7B—N1B—C6B—C1B | −79.0 (2) |
| C7A—N1A—C6A—C1A | 71.9 (2) | C7B—N1B—C6B—C5B | 104.47 (19) |
| C6A—N1A—C7A—N2A | −169.70 (16) | C6B—N1B—C7B—N2B | 174.25 (15) |
| C6A—N1A—C7A—S1A | 12.6 (2) | C6B—N1B—C7B—S1B | −7.4 (2) |
| H··· | ||||
| N1 | 0.794 (19) | 2.586 (19) | 3.3485 (15) | 161.7 (19) |
| N2 | 0.81 (2) | 2.77 (3) | 3.499 (2) | 151 (2) |
| N2 | 0.85 (2) | 2.65 (2) | 3.504 (2) | 175.2 (16) |
| N1 | 0.88 (2) | 2.49 (2) | 3.3273 (15) | 158.9 (17) |
| N2 | 0.88 (2) | 2.76 (2) | 3.5179 (19) | 146.4 (18) |
| N2 | 0.82 (3) | 2.66 (3) | 3.4592 (19) | 167 (2) |
| C4 | 0.95 | 2.50 | 3.094 (2) | 121 |
| C5 | 0.95 | 2.52 | 3.111 (2) | 121 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1 | 0.794 (19) | 2.586 (19) | 3.3485 (15) | 161.7 (19) |
| N2 | 0.81 (2) | 2.77 (3) | 3.499 (2) | 151 (2) |
| N2 | 0.85 (2) | 2.65 (2) | 3.504 (2) | 175.2 (16) |
| N1 | 0.88 (2) | 2.49 (2) | 3.3273 (15) | 158.9 (17) |
| N2 | 0.88 (2) | 2.76 (2) | 3.5179 (19) | 146.4 (18) |
| N2 | 0.82 (3) | 2.66 (3) | 3.4592 (19) | 167 (2) |
| C4 | 0.95 | 2.50 | 3.094 (2) | 121 |
| C5 | 0.95 | 2.52 | 3.111 (2) | 121 |
Symmetry codes: (i) ; (ii) ; (iii) .