Literature DB >> 22904874

1-(3-Chloro-phen-yl)thio-urea.

Hoong-Kun Fun, Ching Kheng Quah, Prakash S Nayak, B Narayana, B K Sarojini.   

Abstract

In the title compound, C(7)H(7)ClN(2)S, the thio-urea N-C(=S)-N plane forms a dihedral angle of 64.80 (6)° with the benzene ring. In the crystal, mol-ecules are linked via inter-molecular N-H⋯S and N-H⋯Cl hydrogen bonds into a sheet extending parallel to the (101) plane.

Entities:  

Year:  2012        PMID: 22904874      PMCID: PMC3414341          DOI: 10.1107/S160053681203084X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Saleem & Yamin (2010 ▶); Sarojini et al. (2007 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C7H7ClN2S M = 186.66 Triclinic, a = 5.4406 (3) Å b = 8.5715 (4) Å c = 9.2392 (4) Å α = 104.221 (2)° β = 91.776 (2)° γ = 96.362 (2)° V = 414.33 (3) Å3 Z = 2 Mo Kα radiation μ = 0.64 mm−1 T = 100 K 0.38 × 0.30 × 0.07 mm

Data collection

Bruker SMART APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.791, T max = 0.956 8525 measured reflections 2414 independent reflections 2194 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.085 S = 1.08 2414 reflections 112 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.68 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681203084X/is5164sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681203084X/is5164Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681203084X/is5164Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H7ClN2SZ = 2
Mr = 186.66F(000) = 192
Triclinic, P1Dx = 1.496 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.4406 (3) ÅCell parameters from 5475 reflections
b = 8.5715 (4) Åθ = 2.9–30.0°
c = 9.2392 (4) ŵ = 0.64 mm1
α = 104.221 (2)°T = 100 K
β = 91.776 (2)°Plate, colourless
γ = 96.362 (2)°0.38 × 0.30 × 0.07 mm
V = 414.33 (3) Å3
Bruker SMART APEXII DUO CCD area-detector diffractometer2414 independent reflections
Radiation source: fine-focus sealed tube2194 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
φ and ω scansθmax = 30.1°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −7→7
Tmin = 0.791, Tmax = 0.956k = −12→12
8525 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0374P)2 + 0.222P] where P = (Fo2 + 2Fc2)/3
2414 reflections(Δ/σ)max = 0.001
112 parametersΔρmax = 0.68 e Å3
0 restraintsΔρmin = −0.37 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.18973 (6)0.42500 (4)1.19169 (4)0.02562 (10)
S10.60726 (6)0.24290 (3)0.46595 (4)0.01698 (10)
N10.2888 (2)0.14096 (13)0.64519 (13)0.0164 (2)
N20.2660 (2)0.39857 (14)0.61960 (14)0.0190 (2)
C1−0.0855 (2)0.05999 (16)0.76120 (15)0.0181 (2)
H1−0.1397−0.01710.67300.022*
C2−0.2277 (2)0.07757 (17)0.88598 (16)0.0214 (3)
H2−0.37720.01160.88020.026*
C3−0.1494 (2)0.19203 (17)1.01876 (15)0.0201 (3)
H3−0.24600.20461.10120.024*
C40.0770 (2)0.28730 (15)1.02523 (14)0.0172 (2)
C50.2222 (2)0.27251 (15)0.90312 (15)0.0167 (2)
H40.37310.33720.90970.020*
C60.1378 (2)0.15877 (14)0.76997 (14)0.0150 (2)
C70.3726 (2)0.26353 (14)0.58419 (14)0.0150 (2)
H2N20.147 (4)0.404 (3)0.669 (2)0.033 (5)*
H1N20.310 (4)0.479 (3)0.587 (2)0.028 (5)*
H1N10.335 (4)0.050 (3)0.610 (2)0.029 (5)*
U11U22U33U12U13U23
Cl10.02138 (16)0.03212 (19)0.01919 (17)0.00492 (13)−0.00105 (12)−0.00194 (13)
S10.01841 (15)0.01114 (14)0.02287 (17)0.00166 (10)0.00657 (11)0.00646 (11)
N10.0210 (5)0.0096 (4)0.0193 (5)0.0014 (4)0.0059 (4)0.0046 (4)
N20.0195 (5)0.0133 (5)0.0271 (6)0.0038 (4)0.0083 (4)0.0091 (4)
C10.0178 (5)0.0168 (5)0.0196 (6)−0.0018 (4)−0.0009 (4)0.0065 (4)
C20.0164 (5)0.0246 (6)0.0246 (6)−0.0027 (5)0.0011 (5)0.0107 (5)
C30.0167 (5)0.0255 (6)0.0206 (6)0.0031 (5)0.0034 (5)0.0099 (5)
C40.0170 (5)0.0184 (5)0.0166 (6)0.0042 (4)−0.0006 (4)0.0041 (4)
C50.0142 (5)0.0148 (5)0.0208 (6)0.0006 (4)0.0008 (4)0.0049 (4)
C60.0160 (5)0.0128 (5)0.0176 (6)0.0016 (4)0.0021 (4)0.0065 (4)
C70.0153 (5)0.0122 (5)0.0176 (5)−0.0005 (4)0.0006 (4)0.0047 (4)
Cl1—C41.7389 (13)C1—C21.3948 (19)
S1—C71.7021 (13)C1—H10.9300
N1—C71.3527 (15)C2—C31.390 (2)
N1—C61.4239 (16)C2—H20.9300
N1—H1N10.83 (2)C3—C41.3918 (17)
N2—C71.3257 (17)C3—H30.9300
N2—H2N20.80 (2)C4—C51.3855 (18)
N2—H1N20.84 (2)C5—C61.3968 (17)
C1—C61.3901 (16)C5—H40.9300
C7—N1—C6124.20 (11)C4—C3—H3120.8
C7—N1—H1N1117.8 (14)C5—C4—C3121.85 (12)
C6—N1—H1N1117.9 (14)C5—C4—Cl1118.15 (10)
C7—N2—H2N2121.1 (16)C3—C4—Cl1119.97 (10)
C7—N2—H1N2122.5 (14)C4—C5—C6118.84 (11)
H2N2—N2—H1N2116 (2)C4—C5—H4120.6
C6—C1—C2119.36 (12)C6—C5—H4120.6
C6—C1—H1120.3C1—C6—C5120.51 (12)
C2—C1—H1120.3C1—C6—N1120.46 (11)
C3—C2—C1121.08 (12)C5—C6—N1118.98 (11)
C3—C2—H2119.5N2—C7—N1117.85 (12)
C1—C2—H2119.5N2—C7—S1121.69 (10)
C2—C3—C4118.34 (12)N1—C7—S1120.45 (10)
C2—C3—H3120.8
C6—C1—C2—C3−0.1 (2)C2—C1—C6—N1178.69 (12)
C1—C2—C3—C4−1.1 (2)C4—C5—C6—C1−1.26 (19)
C2—C3—C4—C51.1 (2)C4—C5—C6—N1−178.74 (11)
C2—C3—C4—Cl1−176.81 (10)C7—N1—C6—C1126.31 (14)
C3—C4—C5—C60.1 (2)C7—N1—C6—C5−56.21 (18)
Cl1—C4—C5—C6177.99 (10)C6—N1—C7—N2−15.51 (19)
C2—C1—C6—C51.24 (19)C6—N1—C7—S1164.53 (10)
D—H···AD—HH···AD···AD—H···A
N2—H2N2···Cl1i0.80 (2)2.64 (2)3.3583 (12)150 (2)
N2—H1N2···S1ii0.83 (3)2.54 (3)3.3619 (13)167.5 (19)
N1—H1N1···S1iii0.84 (2)2.49 (3)3.3149 (12)167 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2N2⋯Cl1i 0.80 (2)2.64 (2)3.3583 (12)150 (2)
N2—H1N2⋯S1ii 0.83 (3)2.54 (3)3.3619 (13)167.5 (19)
N1—H1N1⋯S1iii 0.84 (2)2.49 (3)3.3149 (12)167 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N-(2-Bromo-phen-yl)thio-urea.

Authors:  Halima F Saleem; Bohari M Yamin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-10

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
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1.  1-(2,4-Difluoro-phen-yl)thio-urea.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18

2.  1-(3-Bromo-phen-yl)thio-urea.

Authors:  Hoong-Kun Fun; Ching Kheng Quah; Prakash S Nayak; B Narayana; B K Sarojini
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-18
  2 in total

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