Literature DB >> 22904870

2-(1,5-Diphenyl-1H-pyrazol-3-yl-oxy)-1-(2-sulfanyl-idene-1,3-thia-zolidin-3-yl)-ethanone.

Yi Li, Yuan-Yuan Liu, Xiao-Hui Xiong, Ping Wei.   

Abstract

The title compound, C(20)H(17)N(3)O(2)S(2), was synthesized by the reaction of 2-(1,5-diphenyl-1H-pyrazol-3-yl-oxy)acetic acid and thia-zolidine-2-thione. The C-linked benzene ring, N-linked benzene ring and thia-zolidine-2-thione ring are twisted 31.33 (2), 62.87 (1) and 82.71 (2)°, respectively, from the plane of the bridging 1H-pyrazole ring. The phenyl rings are oriented at a dihedral angle of 72.16 (2)°.

Entities:  

Year:  2012        PMID: 22904870      PMCID: PMC3414337          DOI: 10.1107/S1600536812029959

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pyrazol derivative bioactivities, see: Aly (2009 ▶); Meegalla et al. (2004 ▶); Morimoto et al. (1990 ▶). For a related structure, see: Goodman et al. (1971 ▶). For bond lengths, see: Allen et al. (1987 ▶). For the literature method used for preparation, see: Liu et al. (2011 ▶).

Experimental

Crystal data

C20H17N3O2S2 M = 395.49 Monoclinic, a = 12.813 (3) Å b = 16.453 (3) Å c = 8.9470 (18) Å β = 97.68 (3)° V = 1869.2 (7) Å3 Z = 4 Mo Kα radiation μ = 0.31 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.914, T max = 0.970 3625 measured reflections 3391 independent reflections 2202 reflections with I > 2σ(I) R int = 0.024 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.149 S = 1.08 3391 reflections 244 parameters 2 restraints H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.68 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1985 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812029959/bq2369sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812029959/bq2369Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812029959/bq2369Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H17N3O2S2F(000) = 824
Mr = 395.49Dx = 1.405 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 12.813 (3) Åθ = 9–13°
b = 16.453 (3) ŵ = 0.31 mm1
c = 8.9470 (18) ÅT = 293 K
β = 97.68 (3)°Needle, yellow
V = 1869.2 (7) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer2202 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.024
Graphite monochromatorθmax = 25.3°, θmin = 1.6°
ω/2θ scansh = −15→15
Absorption correction: ψ scan (North et al., 1968)k = −19→0
Tmin = 0.914, Tmax = 0.970l = 0→10
3625 measured reflections3 standard reflections every 200 reflections
3391 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0324P)2 + 2.7384P] where P = (Fo2 + 2Fc2)/3
3391 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.65 e Å3
2 restraintsΔρmin = −0.68 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.53480 (10)0.88849 (7)0.53157 (15)0.0611 (4)
S20.62593 (11)0.72831 (9)0.50196 (19)0.0775 (5)
O10.3356 (3)0.6778 (2)0.7213 (4)0.0675 (10)
O20.4300 (2)0.53904 (17)0.6832 (3)0.0519 (8)
N10.4433 (3)0.7614 (2)0.6153 (4)0.0431 (8)
N20.3178 (3)0.5311 (2)0.4521 (4)0.0476 (9)
N30.2289 (3)0.4864 (2)0.4065 (4)0.0434 (8)
C10.4111 (4)0.9057 (3)0.5959 (6)0.0849 (18)
H1A0.41930.94390.67920.102*
H1B0.36170.92840.51520.102*
C20.3715 (4)0.8282 (3)0.6449 (5)0.0704 (15)
H2B0.30190.81800.59130.084*
H2C0.36600.83050.75190.084*
C30.5321 (3)0.7847 (3)0.5549 (4)0.0445 (10)
C40.4130 (3)0.6833 (3)0.6580 (5)0.0462 (11)
C50.4775 (3)0.6096 (2)0.6282 (5)0.0478 (11)
H5A0.48020.60420.52080.057*
H5B0.54890.61550.67870.057*
C60.3442 (3)0.5100 (2)0.5956 (5)0.0423 (10)
C70.2761 (3)0.4523 (2)0.6429 (5)0.0426 (10)
H7A0.27980.42850.73780.051*
C80.2024 (3)0.4379 (2)0.5198 (4)0.0384 (9)
C90.1076 (3)0.3868 (2)0.5110 (4)0.0405 (10)
C100.1077 (4)0.3190 (3)0.6039 (5)0.0530 (12)
H10A0.16950.30370.66390.064*
C110.0169 (4)0.2743 (3)0.6081 (6)0.0685 (15)
H11A0.01760.22940.67130.082*
C12−0.0750 (4)0.2962 (3)0.5185 (7)0.0693 (15)
H12A−0.13600.26600.52130.083*
C13−0.0762 (4)0.3624 (3)0.4254 (6)0.0597 (13)
H13A−0.13810.37700.36480.072*
C140.0137 (3)0.4070 (3)0.4214 (5)0.0492 (11)
H14A0.01200.45180.35760.059*
C150.1921 (3)0.4838 (3)0.2477 (4)0.0418 (10)
C160.1999 (4)0.4125 (3)0.1711 (5)0.0528 (12)
H16A0.22620.36590.22170.063*
C170.1679 (4)0.4109 (3)0.0157 (5)0.0610 (13)
H17A0.17170.3629−0.03820.073*
C180.1307 (4)0.4805 (4)−0.0572 (5)0.0628 (14)
H18A0.10950.4795−0.16080.075*
C190.1246 (4)0.5515 (3)0.0212 (5)0.0593 (13)
H19A0.10000.5985−0.02950.071*
C200.1549 (3)0.5535 (3)0.1751 (5)0.0519 (11)
H20A0.15020.60150.22880.062*
U11U22U33U12U13U23
S10.0605 (8)0.0463 (7)0.0763 (9)−0.0077 (6)0.0087 (6)0.0054 (7)
S20.0616 (8)0.0618 (9)0.1185 (13)0.0057 (7)0.0472 (8)0.0103 (9)
O10.055 (2)0.063 (2)0.090 (3)−0.0044 (17)0.0316 (19)0.0053 (19)
O20.0529 (18)0.0451 (17)0.0544 (19)−0.0096 (14)−0.0054 (15)0.0072 (15)
N10.0407 (19)0.042 (2)0.048 (2)0.0003 (16)0.0080 (16)−0.0015 (17)
N20.048 (2)0.050 (2)0.044 (2)−0.0088 (18)0.0075 (17)0.0045 (18)
N30.046 (2)0.048 (2)0.0357 (19)−0.0114 (17)0.0056 (16)0.0052 (16)
C10.077 (4)0.053 (3)0.130 (5)0.006 (3)0.037 (4)0.001 (3)
C20.067 (3)0.050 (3)0.099 (4)0.009 (3)0.031 (3)−0.008 (3)
C30.043 (2)0.048 (3)0.041 (2)−0.003 (2)0.0004 (19)0.001 (2)
C40.041 (2)0.049 (3)0.048 (3)−0.006 (2)0.004 (2)−0.001 (2)
C50.043 (2)0.040 (2)0.060 (3)−0.007 (2)0.004 (2)0.000 (2)
C60.044 (2)0.034 (2)0.049 (3)0.0006 (19)0.005 (2)0.000 (2)
C70.050 (3)0.042 (2)0.037 (2)−0.001 (2)0.007 (2)0.0033 (19)
C80.042 (2)0.037 (2)0.039 (2)0.0023 (18)0.0122 (19)0.0011 (18)
C90.045 (2)0.041 (2)0.038 (2)−0.0004 (19)0.0165 (19)−0.005 (2)
C100.055 (3)0.047 (3)0.059 (3)−0.001 (2)0.015 (2)0.006 (2)
C110.078 (4)0.050 (3)0.084 (4)−0.009 (3)0.034 (3)0.012 (3)
C120.055 (3)0.061 (3)0.096 (4)−0.017 (3)0.027 (3)−0.010 (3)
C130.051 (3)0.062 (3)0.068 (3)−0.004 (2)0.013 (2)−0.012 (3)
C140.050 (3)0.048 (3)0.052 (3)−0.002 (2)0.017 (2)−0.004 (2)
C150.043 (2)0.050 (3)0.033 (2)−0.006 (2)0.0097 (18)0.003 (2)
C160.061 (3)0.056 (3)0.043 (3)0.005 (2)0.012 (2)0.007 (2)
C170.064 (3)0.075 (4)0.044 (3)0.004 (3)0.010 (2)−0.010 (3)
C180.053 (3)0.099 (4)0.037 (3)0.005 (3)0.006 (2)0.008 (3)
C190.058 (3)0.072 (3)0.049 (3)0.009 (3)0.011 (2)0.022 (3)
C200.056 (3)0.052 (3)0.050 (3)0.002 (2)0.015 (2)0.004 (2)
S1—C31.721 (4)C8—C91.470 (5)
S1—C11.779 (5)C9—C101.391 (6)
S2—C31.639 (4)C9—C141.395 (6)
O1—C41.209 (5)C10—C111.382 (6)
O2—C61.349 (5)C10—H10A0.9300
O2—C51.428 (5)C11—C121.380 (7)
N1—C31.378 (5)C11—H11A0.9300
N1—C41.409 (5)C12—C131.369 (7)
N1—C21.479 (5)C12—H12A0.9300
N2—C61.330 (5)C13—C141.371 (6)
N2—N31.371 (4)C13—H13A0.9300
N3—C81.369 (5)C14—H14A0.9300
N3—C151.437 (5)C15—C161.369 (6)
C1—C21.461 (7)C15—C201.372 (6)
C1—H1A0.9700C16—C171.397 (6)
C1—H1B0.9700C16—H16A0.9300
C2—H2B0.9700C17—C181.371 (7)
C2—H2C0.9700C17—H17A0.9300
C4—C51.513 (6)C18—C191.371 (7)
C5—H5A0.9700C18—H18A0.9300
C5—H5B0.9700C19—C201.380 (6)
C6—C71.393 (5)C19—H19A0.9300
C7—C81.372 (6)C20—H20A0.9300
C7—H7A0.9300
C3—S1—C194.9 (2)N3—C8—C7106.4 (3)
C6—O2—C5116.1 (3)N3—C8—C9125.4 (4)
C3—N1—C4129.3 (4)C7—C8—C9128.1 (4)
C3—N1—C2115.3 (4)C10—C9—C14117.8 (4)
C4—N1—C2115.4 (3)C10—C9—C8119.4 (4)
C6—N2—N3103.9 (3)C14—C9—C8122.5 (4)
C8—N3—N2111.8 (3)C11—C10—C9120.6 (5)
C8—N3—C15129.3 (3)C11—C10—H10A119.7
N2—N3—C15117.4 (3)C9—C10—H10A119.7
C2—C1—S1108.6 (4)C12—C11—C10120.1 (5)
C2—C1—H1A110.0C12—C11—H11A120.0
S1—C1—H1A110.0C10—C11—H11A120.0
C2—C1—H1B110.0C13—C12—C11120.0 (5)
S1—C1—H1B110.0C13—C12—H12A120.0
H1A—C1—H1B108.4C11—C12—H12A120.0
C1—C2—N1110.2 (4)C12—C13—C14120.0 (5)
C1—C2—H2B109.6C12—C13—H13A120.0
N1—C2—H2B109.6C14—C13—H13A120.0
C1—C2—H2C109.6C13—C14—C9121.4 (4)
N1—C2—H2C109.6C13—C14—H14A119.3
H2B—C2—H2C108.1C9—C14—H14A119.3
N1—C3—S2129.2 (3)C16—C15—C20121.6 (4)
N1—C3—S1110.9 (3)C16—C15—N3118.9 (4)
S2—C3—S1120.0 (3)C20—C15—N3119.4 (4)
O1—C4—N1117.9 (4)C15—C16—C17118.8 (4)
O1—C4—C5121.6 (4)C15—C16—H16A120.6
N1—C4—C5120.4 (4)C17—C16—H16A120.6
O2—C5—C4108.8 (3)C18—C17—C16119.7 (5)
O2—C5—H5A109.9C18—C17—H17A120.1
C4—C5—H5A109.9C16—C17—H17A120.1
O2—C5—H5B109.9C19—C18—C17120.5 (4)
C4—C5—H5B109.9C19—C18—H18A119.7
H5A—C5—H5B108.3C17—C18—H18A119.7
N2—C6—O2123.4 (4)C18—C19—C20120.3 (5)
N2—C6—C7112.5 (4)C18—C19—H19A119.9
O2—C6—C7124.1 (4)C20—C19—H19A119.9
C8—C7—C6105.4 (4)C15—C20—C19119.1 (5)
C8—C7—H7A127.3C15—C20—H20A120.5
C6—C7—H7A127.3C19—C20—H20A120.5
C6—N2—N3—C8−0.9 (4)C15—N3—C8—C9−18.9 (6)
C6—N2—N3—C15−168.3 (4)C6—C7—C8—N30.0 (4)
C3—S1—C1—C23.6 (2)C6—C7—C8—C9−174.8 (4)
S1—C1—C2—N1−3.8 (3)N3—C8—C9—C10155.4 (4)
C3—N1—C2—C12.3 (4)C7—C8—C9—C10−30.7 (6)
C4—N1—C2—C1−179.9 (3)N3—C8—C9—C14−29.9 (6)
C4—N1—C3—S25.1 (6)C7—C8—C9—C14144.0 (4)
C2—N1—C3—S2−177.5 (3)C14—C9—C10—C11−0.9 (6)
C4—N1—C3—S1−177.0 (3)C8—C9—C10—C11174.0 (4)
C2—N1—C3—S10.4 (3)C9—C10—C11—C120.6 (7)
C1—S1—C3—N1−2.3 (3)C10—C11—C12—C13−0.1 (8)
C1—S1—C3—S2175.8 (3)C11—C12—C13—C14−0.2 (8)
C3—N1—C4—O1173.6 (4)C12—C13—C14—C9−0.1 (7)
C2—N1—C4—O1−3.8 (5)C10—C9—C14—C130.7 (6)
C3—N1—C4—C5−4.9 (6)C8—C9—C14—C13−174.1 (4)
C2—N1—C4—C5177.7 (4)C8—N3—C15—C16−54.4 (6)
C6—O2—C5—C477.9 (4)N2—N3—C15—C16110.5 (4)
O1—C4—C5—O21.1 (6)C8—N3—C15—C20128.9 (5)
N1—C4—C5—O2179.6 (3)N2—N3—C15—C20−66.3 (5)
N3—N2—C6—O2178.4 (4)C20—C15—C16—C17−0.9 (7)
N3—N2—C6—C70.9 (5)N3—C15—C16—C17−177.5 (4)
C5—O2—C6—N215.6 (6)C15—C16—C17—C180.9 (7)
C5—O2—C6—C7−167.1 (4)C16—C17—C18—C19−0.1 (7)
N2—C6—C7—C8−0.6 (5)C17—C18—C19—C20−0.7 (7)
O2—C6—C7—C8−178.1 (4)C16—C15—C20—C190.1 (7)
N2—N3—C8—C70.5 (4)N3—C15—C20—C19176.7 (4)
C15—N3—C8—C7166.1 (4)C18—C19—C20—C150.7 (7)
N2—N3—C8—C9175.6 (4)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and GABA receptor potency of 3-thiomethyl-4-(hetero)aryl-5-amino-1-phenylpyrazoles.

Authors:  Sanath K Meegalla; Dario Doller; DeYou Sha; Rich Soll; Nancy Wisnewski; Gary M Silver; Dale Dhanoa
Journal:  Bioorg Med Chem Lett       Date:  2004-10-04       Impact factor: 2.823

  2 in total

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