| Literature DB >> 22904865 |
Goverdhan Mehta, Tabrez Babu Khan.
Abstract
In an endeavor directed towards the construction of the oxabicyclic[3.2.1]octane segment present in the bioactive natural products of cortistatins and icetexanes genre, the title compound, C(13)H(19)BrO(3), was synthesized from (4aR,9aS)-1,3,4,4a,5,6,9,9a-octa-hydro-spiro-[benzo[7]annulene-2,2'-[1,3]dioxolane]-4a-ol via a transannular bromo-etherification protocol. The six-membered ring adopts a twist-boat conformation, while the fused cycloheptane ring adopts a chair conformation. The crystal packing is effected through two distinct inter-molecular C-H⋯O hydrogen-bond patterns and mol-ecules are arranged to define an inter-esting motif along the b axis.Entities:
Year: 2012 PMID: 22904865 PMCID: PMC3414332 DOI: 10.1107/S1600536812029777
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H19BrO3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4277 reflections |
| θ = 2.6–24.2° | |
| µ = 3.21 mm−1 | |
| β = 117.044 (1)° | Block, colorless |
| 0.30 × 0.20 × 0.15 mm | |
| Bruker APEXII CCD diffractometer | 2368 independent reflections |
| Radiation source: fine-focus sealed tube | 1859 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.4°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 11338 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| (Δ/σ)max = 0.001 | |
| 2368 reflections | Δρmax = 0.25 e Å−3 |
| 154 parameters | Δρmin = −0.32 e Å−3 |
| 0 restraints |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.70444 (3) | 0.11259 (2) | 0.71170 (3) | 0.06222 (13) | |
| O1 | 0.66345 (15) | 0.35583 (12) | 0.61783 (15) | 0.0391 (4) | |
| O2 | 0.7122 (2) | 0.73040 (14) | 0.57865 (18) | 0.0640 (5) | |
| O3 | 0.84162 (18) | 0.72842 (13) | 0.82550 (18) | 0.0529 (4) | |
| C1 | 0.6947 (2) | 0.24005 (18) | 0.8181 (2) | 0.0424 (5) | |
| H1 | 0.6541 | 0.2205 | 0.8820 | 0.051* | |
| C11 | 0.6034 (2) | 0.32101 (18) | 0.7079 (2) | 0.0404 (5) | |
| H11 | 0.5125 | 0.2915 | 0.6480 | 0.048* | |
| C13 | 0.7789 (3) | 0.8290 (2) | 0.7886 (3) | 0.0547 (7) | |
| H13A | 0.8441 | 0.8848 | 0.8377 | 0.066* | |
| H13B | 0.7043 | 0.8344 | 0.8138 | 0.066* | |
| C4 | 0.7757 (2) | 0.42229 (17) | 0.7136 (2) | 0.0348 (5) | |
| C2 | 0.8358 (2) | 0.2838 (2) | 0.9109 (3) | 0.0479 (6) | |
| H2A | 0.8985 | 0.2259 | 0.9566 | 0.057* | |
| H2B | 0.8345 | 0.3275 | 0.9878 | 0.057* | |
| C7 | 0.7737 (2) | 0.66148 (18) | 0.7019 (2) | 0.0439 (5) | |
| C5 | 0.8222 (3) | 0.48727 (18) | 0.6187 (3) | 0.0482 (6) | |
| H5A | 0.8906 | 0.4482 | 0.6038 | 0.058* | |
| H5B | 0.7453 | 0.4997 | 0.5239 | 0.058* | |
| C3 | 0.8863 (2) | 0.34948 (19) | 0.8204 (3) | 0.0439 (5) | |
| H3A | 0.9638 | 0.3916 | 0.8854 | 0.053* | |
| H3B | 0.9165 | 0.3025 | 0.7663 | 0.053* | |
| C9 | 0.7113 (2) | 0.49168 (18) | 0.7904 (2) | 0.0371 (5) | |
| H9 | 0.7779 | 0.5045 | 0.8922 | 0.044* | |
| C8 | 0.6607 (2) | 0.59613 (19) | 0.7111 (3) | 0.0463 (6) | |
| H8A | 0.6205 | 0.6371 | 0.7613 | 0.056* | |
| H8B | 0.5900 | 0.5822 | 0.6130 | 0.056* | |
| C6 | 0.8809 (3) | 0.59178 (19) | 0.6909 (3) | 0.0510 (6) | |
| H6A | 0.9192 | 0.6282 | 0.6350 | 0.061* | |
| H6B | 0.9540 | 0.5790 | 0.7881 | 0.061* | |
| C12 | 0.7281 (3) | 0.8340 (2) | 0.6265 (3) | 0.0637 (7) | |
| H12A | 0.6419 | 0.8713 | 0.5805 | 0.076* | |
| H12B | 0.7934 | 0.8703 | 0.6032 | 0.076* | |
| C10 | 0.5940 (2) | 0.4216 (2) | 0.7848 (3) | 0.0467 (6) | |
| H10A | 0.6061 | 0.4061 | 0.8825 | 0.056* | |
| H10B | 0.5065 | 0.4560 | 0.7300 | 0.056* |
| Br1 | 0.0895 (3) | 0.04123 (17) | 0.0633 (2) | −0.00573 (13) | 0.04119 (18) | −0.00022 (12) |
| O1 | 0.0431 (9) | 0.0423 (8) | 0.0294 (8) | −0.0076 (7) | 0.0142 (7) | −0.0022 (6) |
| O2 | 0.0890 (14) | 0.0478 (10) | 0.0373 (10) | −0.0019 (10) | 0.0129 (10) | 0.0008 (8) |
| O3 | 0.0545 (10) | 0.0443 (9) | 0.0425 (9) | 0.0021 (8) | 0.0068 (8) | −0.0056 (7) |
| C1 | 0.0489 (14) | 0.0453 (13) | 0.0364 (12) | −0.0032 (10) | 0.0223 (11) | 0.0011 (10) |
| C11 | 0.0321 (12) | 0.0482 (13) | 0.0380 (13) | −0.0066 (10) | 0.0134 (10) | 0.0023 (10) |
| C13 | 0.0602 (17) | 0.0420 (14) | 0.0590 (17) | −0.0012 (12) | 0.0246 (14) | −0.0077 (12) |
| C4 | 0.0335 (12) | 0.0383 (11) | 0.0327 (12) | −0.0032 (9) | 0.0153 (10) | −0.0047 (10) |
| C2 | 0.0453 (14) | 0.0514 (14) | 0.0364 (13) | 0.0075 (11) | 0.0094 (11) | 0.0049 (11) |
| C7 | 0.0488 (14) | 0.0384 (12) | 0.0372 (13) | −0.0014 (11) | 0.0132 (11) | −0.0032 (10) |
| C5 | 0.0584 (16) | 0.0430 (13) | 0.0569 (15) | −0.0040 (11) | 0.0382 (13) | −0.0051 (11) |
| C3 | 0.0313 (12) | 0.0458 (12) | 0.0504 (14) | 0.0011 (10) | 0.0149 (11) | −0.0047 (11) |
| C9 | 0.0325 (12) | 0.0443 (12) | 0.0337 (12) | 0.0026 (9) | 0.0144 (10) | −0.0042 (10) |
| C8 | 0.0370 (12) | 0.0462 (14) | 0.0493 (15) | 0.0067 (10) | 0.0140 (11) | −0.0024 (11) |
| C6 | 0.0516 (15) | 0.0453 (14) | 0.0621 (16) | −0.0098 (11) | 0.0311 (13) | −0.0067 (12) |
| C12 | 0.075 (2) | 0.0490 (16) | 0.0596 (17) | 0.0066 (14) | 0.0237 (15) | 0.0063 (13) |
| C10 | 0.0399 (13) | 0.0549 (14) | 0.0508 (14) | 0.0033 (11) | 0.0255 (12) | 0.0035 (12) |
| Br1—C1 | 1.979 (2) | C2—H2B | 0.9700 |
| O1—C11 | 1.430 (3) | C7—C6 | 1.519 (3) |
| O1—C4 | 1.449 (3) | C7—C8 | 1.533 (4) |
| O2—C12 | 1.384 (3) | C5—C6 | 1.511 (3) |
| O2—C7 | 1.430 (3) | C5—H5A | 0.9700 |
| O3—C13 | 1.416 (3) | C5—H5B | 0.9700 |
| O3—C7 | 1.424 (3) | C3—H3A | 0.9700 |
| C1—C2 | 1.512 (3) | C3—H3B | 0.9700 |
| C1—C11 | 1.519 (3) | C9—C8 | 1.520 (3) |
| C1—H1 | 0.9800 | C9—C10 | 1.547 (3) |
| C11—C10 | 1.528 (3) | C9—H9 | 0.9800 |
| C11—H11 | 0.9800 | C8—H8A | 0.9700 |
| C13—C12 | 1.498 (4) | C8—H8B | 0.9700 |
| C13—H13A | 0.9700 | C6—H6A | 0.9700 |
| C13—H13B | 0.9700 | C6—H6B | 0.9700 |
| C4—C3 | 1.524 (3) | C12—H12A | 0.9700 |
| C4—C5 | 1.531 (3) | C12—H12B | 0.9700 |
| C4—C9 | 1.552 (3) | C10—H10A | 0.9700 |
| C2—C3 | 1.529 (3) | C10—H10B | 0.9700 |
| C2—H2A | 0.9700 | ||
| C11—O1—C4 | 104.04 (15) | C4—C5—H5A | 109.5 |
| C12—O2—C7 | 109.37 (19) | C6—C5—H5B | 109.5 |
| C13—O3—C7 | 107.58 (18) | C4—C5—H5B | 109.5 |
| C2—C1—C11 | 111.43 (19) | H5A—C5—H5B | 108.1 |
| C2—C1—Br1 | 110.40 (16) | C4—C3—C2 | 111.99 (18) |
| C11—C1—Br1 | 108.80 (15) | C4—C3—H3A | 109.2 |
| C2—C1—H1 | 108.7 | C2—C3—H3A | 109.2 |
| C11—C1—H1 | 108.7 | C4—C3—H3B | 109.2 |
| Br1—C1—H1 | 108.7 | C2—C3—H3B | 109.2 |
| O1—C11—C1 | 110.25 (17) | H3A—C3—H3B | 107.9 |
| O1—C11—C10 | 103.78 (17) | C8—C9—C10 | 112.51 (19) |
| C1—C11—C10 | 110.77 (19) | C8—C9—C4 | 111.12 (18) |
| O1—C11—H11 | 110.6 | C10—C9—C4 | 102.94 (18) |
| C1—C11—H11 | 110.6 | C8—C9—H9 | 110.0 |
| C10—C11—H11 | 110.6 | C10—C9—H9 | 110.0 |
| O3—C13—C12 | 103.1 (2) | C4—C9—H9 | 110.0 |
| O3—C13—H13A | 111.2 | C9—C8—C7 | 113.1 (2) |
| C12—C13—H13A | 111.2 | C9—C8—H8A | 108.9 |
| O3—C13—H13B | 111.2 | C7—C8—H8A | 108.9 |
| C12—C13—H13B | 111.2 | C9—C8—H8B | 108.9 |
| H13A—C13—H13B | 109.1 | C7—C8—H8B | 108.9 |
| O1—C4—C3 | 107.08 (17) | H8A—C8—H8B | 107.8 |
| O1—C4—C5 | 107.98 (17) | C5—C6—C7 | 111.8 (2) |
| C3—C4—C5 | 113.22 (18) | C5—C6—H6A | 109.3 |
| O1—C4—C9 | 103.17 (16) | C7—C6—H6A | 109.3 |
| C3—C4—C9 | 112.15 (18) | C5—C6—H6B | 109.3 |
| C5—C4—C9 | 112.49 (18) | C7—C6—H6B | 109.3 |
| C1—C2—C3 | 111.68 (18) | H6A—C6—H6B | 107.9 |
| C1—C2—H2A | 109.3 | O2—C12—C13 | 106.1 (2) |
| C3—C2—H2A | 109.3 | O2—C12—H12A | 110.5 |
| C1—C2—H2B | 109.3 | C13—C12—H12A | 110.5 |
| C3—C2—H2B | 109.3 | O2—C12—H12B | 110.5 |
| H2A—C2—H2B | 107.9 | C13—C12—H12B | 110.5 |
| O3—C7—O2 | 105.78 (18) | H12A—C12—H12B | 108.7 |
| O3—C7—C6 | 107.5 (2) | C11—C10—C9 | 104.20 (17) |
| O2—C7—C6 | 111.1 (2) | C11—C10—H10A | 110.9 |
| O3—C7—C8 | 112.2 (2) | C9—C10—H10A | 110.9 |
| O2—C7—C8 | 108.2 (2) | C11—C10—H10B | 110.9 |
| C6—C7—C8 | 111.80 (19) | C9—C10—H10B | 110.9 |
| C6—C5—C4 | 110.50 (19) | H10A—C10—H10B | 108.9 |
| C6—C5—H5A | 109.5 |
| H··· | ||||
| C11—H11···O2i | 0.98 | 2.53 | 3.445 (3) | 156 |
| C1—H1···O1ii | 0.98 | 2.57 | 3.471 (3) | 153 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C11—H11⋯O2i | 0.98 | 2.53 | 3.445 (3) | 156 |
| C1—H1⋯O1ii | 0.98 | 2.57 | 3.471 (3) | 153 |
Symmetry codes: (i) ; (ii) .