Literature DB >> 22904788

N-(2-Fluoro-benz-yloxy)-1,3,5-trimethyl-2,6-diphenyl-piperidin-4-imine.

Chennan Ramalingan, Seik Weng Ng, Edward R T Tiekink.   

Abstract

In the title compound, C(27)H(29)FN(2)O, the piperidine ring has a twisted boat conformation and all ring substituents occupy equatorial positions. The dihedral angle formed between the phenyl rings is 66.71 (12)°, and the phenyl rings form dihedral angles of 46.60 (13) and 43.75 (13)° with the fluoro-benzene ring, which occupies a position coplanar to the meth-oxy(methyl-idene)amine residue [N-O-C-C torsion angle = -179.5 (2)°]. In the crystal, a complex network of C-H⋯π inter-actions connects the mol-ecules into a three-dimensional architecture.

Entities:  

Year:  2012        PMID: 22904788      PMCID: PMC3414181          DOI: 10.1107/S1600536812029327

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of mol­ecules having a 2,6-diaryl­piperidine core, see: Ramachandran et al. (2011 ▶); Ramalingan et al. (2004 ▶). For the structures of related chloro and bromo derivatives, see: Ramalingan et al. (2012a ▶,b ▶). For the synthesis, see: Ramalingan et al. (2006 ▶).

Experimental

Crystal data

C27H29FN2O M = 416.52 Orthorhombic, a = 7.4004 (3) Å b = 22.4857 (9) Å c = 13.4465 (5) Å V = 2237.54 (15) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.30 × 0.20 × 0.15 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.930, T max = 1.000 14812 measured reflections 2693 independent reflections 2311 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.101 S = 1.03 2693 reflections 280 parameters 1 restraint H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812029327/pv2563sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812029327/pv2563Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812029327/pv2563Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H29FN2OF(000) = 888
Mr = 416.52Dx = 1.236 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4254 reflections
a = 7.4004 (3) Åθ = 2.4–27.5°
b = 22.4857 (9) ŵ = 0.08 mm1
c = 13.4465 (5) ÅT = 100 K
V = 2237.54 (15) Å3Prism, colourless
Z = 40.30 × 0.20 × 0.15 mm
Agilent SuperNova Dual diffractometer with an Atlas detector2693 independent reflections
Radiation source: SuperNova (Mo) X-ray Source2311 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.058
Detector resolution: 10.4041 pixels mm-1θmax = 27.6°, θmin = 2.9°
ω scanh = −9→9
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −21→29
Tmin = 0.930, Tmax = 1.000l = −17→16
14812 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0469P)2 + 0.573P] where P = (Fo2 + 2Fc2)/3
2693 reflections(Δ/σ)max = 0.001
280 parametersΔρmax = 0.21 e Å3
1 restraintΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.1682 (3)0.76313 (8)−0.25008 (12)0.0369 (5)
O10.1493 (2)0.83790 (8)0.03234 (14)0.0210 (4)
N10.1480 (3)0.90124 (9)0.03729 (17)0.0177 (5)
N2−0.1331 (3)0.95190 (9)0.25393 (16)0.0142 (4)
C10.1633 (4)0.72749 (12)−0.1681 (2)0.0222 (6)
C20.1639 (4)0.66675 (13)−0.1813 (2)0.0282 (6)
H20.16810.6499−0.24610.034*
C30.1585 (4)0.63103 (13)−0.0983 (2)0.0295 (7)
H30.15830.5890−0.10540.035*
C40.1533 (4)0.65620 (14)−0.0041 (2)0.0329 (7)
H40.14980.63150.05310.040*
C50.1534 (4)0.71756 (12)0.0062 (2)0.0259 (6)
H50.15030.73450.07090.031*
C60.1578 (4)0.75462 (12)−0.0761 (2)0.0191 (5)
C70.1582 (4)0.82144 (11)−0.06990 (19)0.0209 (6)
H7A0.26990.8375−0.10030.025*
H7B0.05310.8378−0.10630.025*
C80.1264 (3)0.91809 (11)0.12724 (19)0.0154 (5)
C90.1013 (3)0.87766 (11)0.21545 (18)0.0156 (5)
H90.02460.84350.19330.019*
C10−0.0016 (3)0.90997 (10)0.29954 (19)0.0153 (5)
H100.08680.93320.34020.018*
C11−0.0404 (3)1.00355 (11)0.20744 (18)0.0147 (5)
H110.00101.03080.26160.018*
C120.1286 (3)0.98411 (11)0.14558 (18)0.0149 (5)
H120.12261.00460.07960.018*
C130.3042 (3)1.00342 (12)0.1971 (2)0.0207 (6)
H13A0.40800.99080.15710.031*
H13B0.31120.98500.26310.031*
H13C0.30551.04680.20420.031*
C140.2820 (4)0.85183 (12)0.2516 (2)0.0227 (6)
H14A0.34200.83130.19650.034*
H14B0.25960.82360.30580.034*
H14C0.35940.88410.27560.034*
C15−0.2592 (4)0.97521 (12)0.3285 (2)0.0212 (5)
H15A−0.34371.00280.29660.032*
H15B−0.19150.99620.38040.032*
H15C−0.32670.94220.35830.032*
C16−0.0951 (3)0.86507 (11)0.36609 (19)0.0146 (5)
C17−0.2307 (3)0.82735 (11)0.3303 (2)0.0173 (5)
H17−0.26650.82970.26260.021*
C18−0.3132 (4)0.78652 (11)0.3928 (2)0.0200 (6)
H18−0.40600.76140.36780.024*
C19−0.2608 (4)0.78218 (12)0.4915 (2)0.0222 (6)
H19−0.31620.75370.53380.027*
C20−0.1280 (3)0.81934 (11)0.5284 (2)0.0202 (6)
H20−0.09240.81670.59610.024*
C21−0.0465 (3)0.86073 (11)0.46574 (19)0.0169 (5)
H210.04390.88650.49150.020*
C22−0.1760 (3)1.03673 (11)0.14343 (18)0.0149 (5)
C23−0.2317 (4)1.09396 (11)0.16686 (19)0.0178 (5)
H23−0.18371.11330.22390.021*
C24−0.3578 (4)1.12344 (12)0.1073 (2)0.0197 (6)
H24−0.39471.16270.12390.024*
C25−0.4290 (4)1.09576 (11)0.0244 (2)0.0210 (6)
H25−0.51521.1157−0.01600.025*
C26−0.3732 (3)1.03838 (12)0.0005 (2)0.0193 (5)
H26−0.42191.0191−0.05640.023*
C27−0.2472 (3)1.00917 (11)0.05908 (18)0.0163 (5)
H27−0.20900.97020.04170.020*
U11U22U33U12U13U23
F10.0700 (14)0.0239 (9)0.0167 (8)0.0023 (9)0.0004 (8)−0.0001 (7)
O10.0322 (10)0.0142 (9)0.0167 (9)0.0021 (7)0.0041 (8)−0.0017 (8)
N10.0206 (11)0.0131 (10)0.0193 (11)0.0022 (8)0.0011 (9)−0.0004 (9)
N20.0139 (10)0.0147 (10)0.0140 (10)0.0006 (8)0.0016 (8)0.0014 (8)
C10.0282 (14)0.0208 (14)0.0178 (13)0.0010 (11)0.0016 (12)0.0011 (11)
C20.0357 (16)0.0258 (15)0.0232 (15)0.0015 (12)−0.0042 (13)−0.0069 (12)
C30.0397 (18)0.0186 (14)0.0301 (16)0.0014 (12)−0.0004 (14)−0.0046 (12)
C40.0461 (18)0.0248 (16)0.0279 (16)0.0032 (14)0.0007 (14)0.0069 (13)
C50.0372 (17)0.0217 (14)0.0189 (14)0.0021 (12)0.0022 (12)−0.0044 (11)
C60.0182 (13)0.0200 (13)0.0192 (12)0.0039 (10)0.0001 (10)−0.0017 (11)
C70.0320 (15)0.0170 (13)0.0137 (12)0.0016 (11)0.0044 (11)−0.0012 (11)
C80.0104 (11)0.0172 (13)0.0186 (12)0.0018 (9)−0.0002 (10)−0.0008 (10)
C90.0159 (12)0.0149 (12)0.0160 (12)0.0006 (9)0.0029 (10)0.0008 (10)
C100.0146 (12)0.0159 (12)0.0152 (11)0.0000 (9)−0.0006 (9)0.0005 (10)
C110.0169 (12)0.0136 (12)0.0136 (11)−0.0004 (9)−0.0008 (10)−0.0014 (10)
C120.0166 (12)0.0135 (12)0.0146 (12)0.0008 (10)0.0004 (10)0.0026 (10)
C130.0172 (12)0.0217 (14)0.0233 (14)−0.0043 (10)0.0018 (12)−0.0005 (12)
C140.0210 (13)0.0249 (14)0.0220 (13)0.0073 (11)0.0010 (11)0.0037 (12)
C150.0219 (13)0.0211 (13)0.0206 (13)0.0044 (11)0.0074 (11)0.0033 (11)
C160.0146 (12)0.0132 (12)0.0161 (12)0.0022 (9)0.0025 (10)0.0009 (10)
C170.0186 (12)0.0172 (12)0.0161 (11)0.0014 (10)−0.0001 (10)−0.0010 (10)
C180.0153 (12)0.0168 (13)0.0278 (14)−0.0022 (10)0.0014 (11)−0.0007 (11)
C190.0219 (14)0.0174 (13)0.0271 (15)0.0019 (11)0.0072 (12)0.0063 (11)
C200.0220 (13)0.0225 (13)0.0162 (12)0.0050 (10)0.0017 (11)0.0014 (11)
C210.0163 (12)0.0170 (13)0.0173 (12)0.0003 (10)−0.0001 (10)−0.0001 (10)
C220.0160 (12)0.0153 (12)0.0135 (12)−0.0015 (9)0.0050 (10)0.0017 (10)
C230.0206 (13)0.0168 (13)0.0160 (12)−0.0027 (10)0.0029 (10)0.0004 (10)
C240.0234 (14)0.0135 (13)0.0223 (14)0.0037 (10)0.0064 (11)0.0029 (11)
C250.0180 (13)0.0249 (14)0.0200 (13)0.0048 (11)0.0025 (11)0.0056 (11)
C260.0189 (13)0.0228 (13)0.0162 (12)0.0001 (10)−0.0035 (11)0.0006 (11)
C270.0177 (12)0.0148 (12)0.0164 (12)−0.0020 (10)0.0013 (10)0.0011 (10)
F1—C11.363 (3)C13—H13A0.9800
O1—C71.425 (3)C13—H13B0.9800
O1—N11.426 (3)C13—H13C0.9800
N1—C81.278 (3)C14—H14A0.9800
N2—C151.467 (3)C14—H14B0.9800
N2—C111.487 (3)C14—H14C0.9800
N2—C101.487 (3)C15—H15A0.9800
C1—C21.377 (4)C15—H15B0.9800
C1—C61.381 (4)C15—H15C0.9800
C2—C31.376 (4)C16—C211.391 (3)
C2—H20.9500C16—C171.399 (4)
C3—C41.388 (4)C17—C181.386 (4)
C3—H30.9500C17—H170.9500
C4—C51.387 (4)C18—C191.387 (4)
C4—H40.9500C18—H180.9500
C5—C61.386 (4)C19—C201.382 (4)
C5—H50.9500C19—H190.9500
C6—C71.505 (4)C20—C211.392 (4)
C7—H7A0.9900C20—H200.9500
C7—H7B0.9900C21—H210.9500
C8—C91.506 (4)C22—C231.388 (3)
C8—C121.505 (3)C22—C271.396 (4)
C9—C141.536 (4)C23—C241.397 (4)
C9—C101.545 (3)C23—H230.9500
C9—H91.0000C24—C251.381 (4)
C10—C161.516 (3)C24—H240.9500
C10—H101.0000C25—C261.392 (4)
C11—C221.518 (3)C25—H250.9500
C11—C121.564 (3)C26—C271.386 (4)
C11—H111.0000C26—H260.9500
C12—C131.536 (3)C27—H270.9500
C12—H121.0000
C7—O1—N1107.75 (18)C11—C12—H12107.9
C8—N1—O1110.0 (2)C12—C13—H13A109.5
C15—N2—C11107.57 (18)C12—C13—H13B109.5
C15—N2—C10111.1 (2)H13A—C13—H13B109.5
C11—N2—C10111.54 (18)C12—C13—H13C109.5
F1—C1—C2118.6 (2)H13A—C13—H13C109.5
F1—C1—C6117.8 (2)H13B—C13—H13C109.5
C2—C1—C6123.6 (3)C9—C14—H14A109.5
C3—C2—C1118.3 (3)C9—C14—H14B109.5
C3—C2—H2120.9H14A—C14—H14B109.5
C1—C2—H2120.9C9—C14—H14C109.5
C2—C3—C4120.2 (3)H14A—C14—H14C109.5
C2—C3—H3119.9H14B—C14—H14C109.5
C4—C3—H3119.9N2—C15—H15A109.5
C5—C4—C3119.8 (3)N2—C15—H15B109.5
C5—C4—H4120.1H15A—C15—H15B109.5
C3—C4—H4120.1N2—C15—H15C109.5
C6—C5—C4121.2 (3)H15A—C15—H15C109.5
C6—C5—H5119.4H15B—C15—H15C109.5
C4—C5—H5119.4C21—C16—C17118.3 (2)
C1—C6—C5116.8 (2)C21—C16—C10119.8 (2)
C1—C6—C7119.4 (2)C17—C16—C10121.9 (2)
C5—C6—C7123.8 (2)C18—C17—C16120.6 (2)
O1—C7—C6108.2 (2)C18—C17—H17119.7
O1—C7—H7A110.1C16—C17—H17119.7
C6—C7—H7A110.1C19—C18—C17120.2 (3)
O1—C7—H7B110.1C19—C18—H18119.9
C6—C7—H7B110.1C17—C18—H18119.9
H7A—C7—H7B108.4C20—C19—C18120.0 (2)
N1—C8—C9125.6 (2)C20—C19—H19120.0
N1—C8—C12116.5 (2)C18—C19—H19120.0
C9—C8—C12117.9 (2)C19—C20—C21119.7 (3)
C8—C9—C14111.7 (2)C19—C20—H20120.2
C8—C9—C10110.7 (2)C21—C20—H20120.2
C14—C9—C10112.0 (2)C16—C21—C20121.2 (2)
C8—C9—H9107.4C16—C21—H21119.4
C14—C9—H9107.4C20—C21—H21119.4
C10—C9—H9107.4C23—C22—C27119.0 (2)
N2—C10—C16111.5 (2)C23—C22—C11121.6 (2)
N2—C10—C9108.59 (19)C27—C22—C11119.5 (2)
C16—C10—C9110.12 (19)C22—C23—C24120.6 (2)
N2—C10—H10108.8C22—C23—H23119.7
C16—C10—H10108.8C24—C23—H23119.7
C9—C10—H10108.8C25—C24—C23120.2 (2)
N2—C11—C22108.50 (19)C25—C24—H24119.9
N2—C11—C12111.97 (18)C23—C24—H24119.9
C22—C11—C12111.37 (19)C24—C25—C26119.4 (2)
N2—C11—H11108.3C24—C25—H25120.3
C22—C11—H11108.3C26—C25—H25120.3
C12—C11—H11108.3C27—C26—C25120.5 (2)
C8—C12—C13111.2 (2)C27—C26—H26119.7
C8—C12—C11110.75 (19)C25—C26—H26119.7
C13—C12—C11110.9 (2)C26—C27—C22120.4 (2)
C8—C12—H12107.9C26—C27—H27119.8
C13—C12—H12107.9C22—C27—H27119.8
C7—O1—N1—C8175.2 (2)N1—C8—C12—C13−107.0 (3)
F1—C1—C2—C3−179.8 (3)C9—C8—C12—C1372.4 (3)
C6—C1—C2—C30.2 (4)N1—C8—C12—C11129.2 (2)
C1—C2—C3—C4−0.3 (4)C9—C8—C12—C11−51.5 (3)
C2—C3—C4—C50.1 (5)N2—C11—C12—C814.6 (3)
C3—C4—C5—C60.2 (5)C22—C11—C12—C8−107.1 (2)
F1—C1—C6—C5−179.8 (3)N2—C11—C12—C13−109.4 (2)
C2—C1—C6—C50.2 (4)C22—C11—C12—C13128.9 (2)
F1—C1—C6—C7−0.2 (4)N2—C10—C16—C21−122.1 (2)
C2—C1—C6—C7179.8 (3)C9—C10—C16—C21117.3 (2)
C4—C5—C6—C1−0.4 (4)N2—C10—C16—C1757.9 (3)
C4—C5—C6—C7−180.0 (3)C9—C10—C16—C17−62.8 (3)
N1—O1—C7—C6−179.5 (2)C21—C16—C17—C18−0.4 (4)
C1—C6—C7—O1179.1 (2)C10—C16—C17—C18179.7 (2)
C5—C6—C7—O1−1.3 (4)C16—C17—C18—C19−0.7 (4)
O1—N1—C8—C9−1.4 (3)C17—C18—C19—C201.1 (4)
O1—N1—C8—C12177.92 (18)C18—C19—C20—C21−0.4 (4)
N1—C8—C9—C1479.6 (3)C17—C16—C21—C201.0 (4)
C12—C8—C9—C14−99.7 (3)C10—C16—C21—C20−179.0 (2)
N1—C8—C9—C10−154.8 (2)C19—C20—C21—C16−0.6 (4)
C12—C8—C9—C1025.9 (3)N2—C11—C22—C23113.8 (2)
C15—N2—C10—C1647.3 (3)C12—C11—C22—C23−122.5 (2)
C11—N2—C10—C16167.3 (2)N2—C11—C22—C27−66.0 (3)
C15—N2—C10—C9168.8 (2)C12—C11—C22—C2757.7 (3)
C11—N2—C10—C9−71.1 (2)C27—C22—C23—C240.3 (4)
C8—C9—C10—N233.5 (3)C11—C22—C23—C24−179.5 (2)
C14—C9—C10—N2158.9 (2)C22—C23—C24—C250.2 (4)
C8—C9—C10—C16155.9 (2)C23—C24—C25—C26−0.3 (4)
C14—C9—C10—C16−78.7 (3)C24—C25—C26—C27−0.1 (4)
C15—N2—C11—C22−70.3 (2)C25—C26—C27—C220.7 (4)
C10—N2—C11—C22167.55 (19)C23—C22—C27—C26−0.8 (4)
C15—N2—C11—C12166.4 (2)C11—C22—C27—C26179.0 (2)
C10—N2—C11—C1244.2 (3)
D—H···AD—HH···AD···AD—H···A
C7—H7A···Cg1i0.992.963.721 (3)135
C13—H13A···Cg2ii0.982.913.577 (3)127
C18—H18···Cg3iii0.952.903.700 (3)143
C21—H21···Cg2iv0.952.513.446 (3)167
C25—H25···Cg3v0.952.743.654 (3)160
Table 1

Hydrogen-bond geometry (Å, °)

Cg1–Cg3 are the centroids of the C1–C6, C16–C21 and C22–C27 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C7—H7ACg1i 0.992.963.721 (3)135
C13—H13ACg2ii 0.982.913.577 (3)127
C18—H18⋯Cg3iii 0.952.903.700 (3)143
C21—H21⋯Cg2iv 0.952.513.446 (3)167
C25—H25⋯Cg3v 0.952.743.654 (3)160

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, stereochemistry, and antimicrobial evaluation of substituted piperidin-4-one oxime ethers.

Authors:  C Ramalingan; Y T Park; S Kabilan
Journal:  Eur J Med Chem       Date:  2006-04-04       Impact factor: 6.514

3.  Synthesis, spectral, crystal structure and in vitro antimicrobial evaluation of imidazole/benzotriazole substituted piperidin-4-one derivatives.

Authors:  R Ramachandran; M Rani; S Senthan; Yeon Tae Jeong; S Kabilan
Journal:  Eur J Med Chem       Date:  2011-02-23       Impact factor: 6.514

4.  Synthesis and study of antibacterial and antifungal activities of novel 1-[2-(benzoxazol-2-yl)ethoxy]- 2,6-diarylpiperidin-4-ones.

Authors:  C Ramalingan; S Balasubramanian; S Kabilan; M Vasudevan
Journal:  Eur J Med Chem       Date:  2004-06       Impact factor: 6.514

5.  (4E)-N-[(2-Chloro-phen-yl)meth-oxy]-1,3-dimethyl-2,6-diphenyl-piperidin-4-imine.

Authors:  Chennan Ramalingan; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-30

6.  (4E)-N-[(2-Bromo-phen-yl)meth-oxy]-1,3-dimethyl-2,6-diphenyl-piperidin-4-imine.

Authors:  Chennan Ramalingan; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-30
  6 in total

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