Literature DB >> 22904753

Triclinic modification of diaqua-bis-(5-carb-oxy-1H-imidazole-4-carboxyl-ato-κ(2)N(3),O(4))iron(II).

Eriko Ohshima, Kazuki Yoshida, Kazumasa Sugiyama, Hidehiro Uekusa.   

Abstract

The title compound, [Fe(C(5)H(3)N(2)O(4))(2)(H(2)O)(2)], is a triclinic modification of a monoclinic form recently reported by Du et al. [Acta Cryst. (2011) ▶, E67, m997]. The n class="Chemical">Fe(II) ion lies at an inversion center and is coordinated by two N and two O atoms from two 5-carb-oxy-1H-imidazole-4-carboxyl-ate ligands in trans positions, together with two water mol-ecules, completing a slightly distorted octahedral coordination. Inter-molecular N-H⋯O hydrogen bonding between the N-H group of the imidazole ring and the deprotonated carboxyl-ate group builds a chain of 5-carb-oxy-1H-imidazole-4-carboxyl-ate anions along the [101] direction. The water molecules form intermolecular hydrogen bonds to O-C and O=C sites of the carboxylate group in adjacent layers.

Entities:  

Year:  2012        PMID: 22904753      PMCID: PMC3414146          DOI: 10.1107/S1600536812031753

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structural diversity of the coordination architecture of the metal complexes of 4,5-n class="Chemical">imidazole­dicarb­oxy­lic acid, see Shimizu et al. (2004 ▶); Fang & Zhang (2006 ▶). For the isotypic Co analog, see: Li et al. (2011 ▶). For the coexisting phase, see Yakubovich et al. (1995 ▶). For the monoclinic form, see: Du et al. (2011 ▶).

Experimental

Crystal data

[Fe(C5H3N2O4)2(n class="Chemical">H2O)2] M = 402.08 Triclinic, a = 4.9290 (5) Å b = 6.4258 (6) Å c = 12.2812 (10) Å α = 78.161 (3)° β = 85.175 (3)° γ = 72.776 (4)° V = 363.52 (6) Å3 Z = 1 Mo Kα radiation μ = 1.10 mm−1 T = 298 K 0.15 × 0.13 × 0.10 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: empirical (using intensity measurements) (ABSCOR; Higashi, 1995 ▶) T min = 0.852, T max = 0.898 3655 measured reflections 1668 independent reflections 1066 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.075 S = 0.92 1668 reflections 122 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.34 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812031753/fj2571sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812031753/fj2571Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812031753/fj2571Isup6.mol Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Fe(C5H3N2O4)2(H2O)2]Z = 1
Mr = 402.08F(000) = 204
Triclinic, P1Dx = 1.837 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71069 Å
a = 4.9290 (5) ÅCell parameters from 3918 reflections
b = 6.4258 (6) Åθ = 3.4–30.5°
c = 12.2812 (10) ŵ = 1.10 mm1
α = 78.161 (3)°T = 298 K
β = 85.175 (3)°Block, yellow
γ = 72.776 (4)°0.15 × 0.13 × 0.10 mm
V = 363.52 (6) Å3
Rigaku R-AXIS RAPID diffractometer1668 independent reflections
Radiation source: fine-focus sealed tube1066 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.050
Detector resolution: 100 pixels mm-1θmax = 27.5°, θmin = 3.4°
ω scansh = −6→6
Absorption correction: empirical (using intensity measurements) (ABSCOR; Higashi, 1995)k = −8→8
Tmin = 0.852, Tmax = 0.898l = −15→15
3655 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H atoms treated by a mixture of independent and constrained refinement
S = 0.92w = 1/[σ2(Fo2) + (0.0339P)2] where P = (Fo2 + 2Fc2)/3
1668 reflections(Δ/σ)max < 0.001
122 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.34 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors (gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Fe10.00000.00000.00000.0224 (2)
O50.3576 (5)−0.2580 (4)0.06771 (17)0.0314 (5)
H1W0.297 (7)−0.370 (6)0.097 (2)0.047*
H2W0.489 (7)−0.278 (6)0.026 (3)0.047*
N10.1698 (5)−0.0023 (4)−0.16828 (18)0.0237 (5)
C10.3247 (6)0.0920 (5)−0.2439 (2)0.0262 (7)
H10.40990.1967−0.23230.031*
N20.3439 (5)0.0184 (4)−0.33916 (18)0.0277 (6)
H2A0.43460.0598−0.39860.033*
C20.1936 (6)−0.1351 (5)−0.3258 (2)0.0233 (7)
C30.0869 (6)−0.1468 (4)−0.2178 (2)0.0216 (6)
C40.1805 (6)−0.2443 (5)−0.4200 (2)0.0279 (7)
O10.3050 (5)−0.2040 (4)−0.50906 (15)0.0409 (6)
O20.0250 (6)−0.3870 (4)−0.40319 (18)0.0551 (7)
H2−0.0479−0.3917−0.34050.083*
C5−0.0966 (6)−0.2761 (5)−0.1514 (2)0.0236 (6)
O3−0.1770 (4)−0.4089 (3)−0.19419 (15)0.0328 (5)
O4−0.1626 (4)−0.2417 (3)−0.05321 (14)0.0262 (5)
U11U22U33U12U13U23
Fe10.0257 (4)0.0281 (4)0.0170 (3)−0.0135 (3)0.0060 (3)−0.0062 (3)
O50.0304 (14)0.0328 (14)0.0320 (12)−0.0157 (12)0.0077 (9)−0.0019 (10)
N10.0283 (14)0.0267 (14)0.0211 (11)−0.0140 (12)0.0014 (10)−0.0070 (10)
C10.0309 (18)0.0317 (18)0.0225 (14)−0.0184 (15)0.0019 (13)−0.0067 (13)
N20.0314 (15)0.0371 (16)0.0195 (11)−0.0195 (13)0.0077 (10)−0.0058 (11)
C20.0284 (17)0.0243 (17)0.0194 (14)−0.0103 (14)0.0006 (12)−0.0056 (12)
C30.0225 (16)0.0235 (16)0.0191 (13)−0.0078 (14)0.0012 (11)−0.0034 (12)
C40.0343 (19)0.0304 (18)0.0244 (16)−0.0168 (16)0.0028 (13)−0.0077 (13)
O10.0533 (16)0.0563 (16)0.0234 (11)−0.0307 (14)0.0124 (11)−0.0134 (11)
O20.073 (2)0.0626 (18)0.0436 (14)−0.0405 (16)0.0158 (13)−0.0184 (14)
C50.0250 (17)0.0234 (17)0.0239 (15)−0.0083 (14)−0.0014 (12)−0.0052 (13)
O30.0458 (14)0.0345 (13)0.0281 (10)−0.0261 (12)0.0047 (10)−0.0087 (9)
O40.0302 (12)0.0313 (12)0.0218 (10)−0.0179 (11)0.0088 (9)−0.0057 (9)
Fe1—O52.121 (2)C1—H10.9300
Fe1—O5i2.121 (2)N2—C21.377 (3)
Fe1—N1i2.165 (2)N2—H2A0.8600
Fe1—N12.165 (2)C2—C31.380 (3)
Fe1—O4i2.1732 (16)C2—C41.487 (3)
Fe1—O42.1732 (16)C3—C51.489 (4)
O5—H1W0.86 (3)C4—O11.226 (3)
O5—H2W0.79 (3)C4—O21.335 (3)
N1—C11.317 (3)O2—H20.8200
N1—C31.377 (3)C5—O31.257 (3)
C1—N21.336 (3)C5—O41.269 (3)
O5—Fe1—O5i180.00 (11)N1—C1—N2111.5 (2)
O5—Fe1—N1i87.70 (9)N1—C1—H1124.3
O5i—Fe1—N1i92.30 (9)N2—C1—H1124.3
O5—Fe1—N192.30 (9)C1—N2—C2108.2 (2)
O5i—Fe1—N187.70 (9)C1—N2—H2A125.9
N1i—Fe1—N1180.00 (16)C2—N2—H2A125.9
O5—Fe1—O4i90.06 (7)N2—C2—C3105.0 (2)
O5i—Fe1—O4i89.94 (7)N2—C2—C4119.4 (2)
N1i—Fe1—O4i76.79 (7)C3—C2—C4135.6 (2)
N1—Fe1—O4i103.21 (7)N1—C3—C2109.3 (2)
O5—Fe1—O489.94 (7)N1—C3—C5118.0 (2)
O5i—Fe1—O490.06 (7)C2—C3—C5132.7 (2)
N1i—Fe1—O4103.21 (7)O1—C4—O2121.8 (2)
N1—Fe1—O476.79 (7)O1—C4—C2121.5 (2)
O4i—Fe1—O4180.00 (12)O2—C4—C2116.7 (2)
Fe1—O5—H1W107 (2)C4—O2—H2109.5
Fe1—O5—H2W113 (3)O3—C5—O4124.3 (3)
H1W—O5—H2W117 (3)O3—C5—C3119.6 (2)
C1—N1—C3106.0 (2)O4—C5—C3116.1 (2)
C1—N1—Fe1141.85 (18)C5—O4—Fe1116.99 (16)
C3—N1—Fe1112.14 (17)
D—H···AD—HH···AD···AD—H···A
O5—H1W···O3ii0.86 (3)1.86 (3)2.705 (3)165 (3)
O5—H2W···O4iii0.79 (3)1.95 (3)2.702 (3)158 (3)
N2—H2A···O1iv0.861.952.767 (3)157
O2—H2···O30.821.852.665 (3)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H1W⋯O3i 0.86 (3)1.86 (3)2.705 (3)165 (3)
O5—H2W⋯O4ii 0.79 (3)1.95 (3)2.702 (3)158 (3)
N2—H2A⋯O1iii 0.861.952.767 (3)157
O2—H2⋯O30.821.852.665 (3)174

Symmetry codes: (i) ; (ii) ; (iii) .

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