Literature DB >> 21836968

Diaqua-bis-(5-carb-oxy-1H-imidazole-4-carboxyl-ato-κN,O)iron(II).

Chao-Jun Du, Xing-Hua Song, Li-Sheng Wang, Chao-Ling Du.   

Abstract

In the title compound, [Fe(C(5)H(3)N(2)O(4))(2)(H(2)O)(2)], the Fe(II) ion lies on an inversion centre and is coordinated by two N and two O atoms from two 5-carb-oxy-1H-imidazole-4-carboxyl-ate ligands and two water mol-ecules in a distorted octa-hedral geometry. An intra-molecular O-H⋯O hydrogen bond occurs. In the crystal, inter-molecular N-H⋯O and O-H⋯O hydrogen bonds form a three-dimensional network, which consolidates the packing.

Entities:  

Year:  2011        PMID: 21836968      PMCID: PMC3151786          DOI: 10.1107/S1600536811024779

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the diversity of coordination architectures of the metal atom in complexes with 4,5-dicarb­oxy­imidazole, see: Shimizu et al. (2004 ▶); Fang & Zhang (2006 ▶). For the closely related crystal structures of the Zn, Mg and Cd complexes, see: Ma et al. (2003 ▶), Liu et al. (2004 ▶) and Zhang et al. (2004 ▶), respectively.

Experimental

Crystal data

[Fe(C5H3N2O4)2(H2O)2] M = 402.07 Monoclinic, a = 5.0676 (9) Å b = 22.769 (4) Å c = 6.6725 (9) Å β = 113.733 (10)° V = 704.8 (2) Å3 Z = 2 Mo Kα radiation μ = 1.14 mm−1 T = 298 K 0.32 × 0.28 × 0.25 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.712, T max = 0.764 2872 measured reflections 1240 independent reflections 976 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.080 S = 1.05 1240 reflections 116 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811024779/cv5111sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811024779/cv5111Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Fe(C5H3N2O4)2(H2O)2]F(000) = 408
Mr = 402.07Dx = 1.895 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1102 reflections
a = 5.0676 (9) Åθ = 3.5–23.7°
b = 22.769 (4) ŵ = 1.14 mm1
c = 6.6725 (9) ÅT = 298 K
β = 113.733 (10)°Block, pale-yellow
V = 704.8 (2) Å30.32 × 0.28 × 0.25 mm
Z = 2
Bruker SMART APEXII CCD area-detector diffractometer1240 independent reflections
Radiation source: fine-focus sealed tube976 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.2°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −6→5
Tmin = 0.712, Tmax = 0.764k = −26→26
2872 measured reflectionsl = −4→7
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0375P)2 + 0.0621P] where P = (Fo2 + 2Fc2)/3
1240 reflections(Δ/σ)max < 0.001
116 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.2587 (6)0.86826 (13)0.4808 (4)0.0322 (7)
H11.44760.87180.58370.039*
C20.8201 (6)0.88774 (11)0.2661 (4)0.0265 (6)
C30.8639 (6)0.82984 (12)0.2373 (4)0.0279 (6)
C40.5611 (5)0.92523 (12)0.1742 (4)0.0268 (6)
C50.6789 (7)0.78182 (14)0.1066 (5)0.0369 (7)
Fe11.00001.00000.50000.0278 (2)
N11.0693 (5)0.91158 (10)0.4203 (3)0.0289 (6)
N21.1435 (5)0.81868 (10)0.3749 (4)0.0335 (6)
H21.23020.78550.39060.040*
O10.5823 (4)0.97682 (8)0.2452 (3)0.0313 (5)
O20.3337 (4)0.90334 (9)0.0295 (3)0.0370 (5)
O30.4133 (4)0.79590 (9)−0.0221 (3)0.0462 (6)
H30.39750.8318−0.03010.069*
O40.7646 (5)0.73195 (9)0.1211 (4)0.0515 (6)
O1W0.8685 (4)0.96305 (9)0.7355 (3)0.0392 (5)
H1W1.00380.95080.85200.059*
H2W0.76630.98510.77850.059*
U11U22U33U12U13U23
C10.0267 (15)0.0259 (17)0.0363 (16)0.0013 (13)0.0045 (12)−0.0015 (13)
C20.0257 (15)0.0223 (16)0.0300 (14)−0.0002 (12)0.0098 (12)0.0011 (12)
C30.0274 (16)0.0224 (16)0.0320 (15)0.0013 (13)0.0101 (12)0.0011 (12)
C40.0259 (16)0.0258 (18)0.0268 (14)0.0010 (12)0.0088 (12)0.0022 (12)
C50.0379 (18)0.0283 (18)0.0430 (18)−0.0011 (15)0.0144 (14)−0.0057 (14)
Fe10.0267 (3)0.0203 (3)0.0314 (3)0.0024 (3)0.0067 (2)−0.0026 (2)
N10.0271 (13)0.0217 (13)0.0331 (12)0.0008 (11)0.0073 (10)−0.0030 (10)
N20.0316 (14)0.0218 (14)0.0432 (14)0.0079 (11)0.0110 (11)0.0020 (11)
O10.0282 (11)0.0220 (11)0.0375 (11)0.0047 (9)0.0068 (9)−0.0019 (9)
O20.0277 (11)0.0317 (12)0.0402 (11)0.0007 (10)0.0018 (9)0.0000 (9)
O30.0367 (12)0.0286 (13)0.0570 (14)−0.0070 (10)0.0019 (10)−0.0073 (11)
O40.0512 (15)0.0258 (13)0.0703 (16)−0.0008 (11)0.0169 (12)−0.0131 (11)
O1W0.0346 (12)0.0437 (14)0.0385 (11)0.0168 (10)0.0140 (9)0.0092 (10)
C1—N11.321 (3)C5—O31.312 (3)
C1—N21.335 (3)Fe1—O1Wi2.1128 (19)
C1—H10.9300Fe1—O1W2.1128 (19)
C2—C31.363 (4)Fe1—N12.147 (2)
C2—N11.379 (3)Fe1—N1i2.147 (2)
C2—C41.476 (4)Fe1—O12.1801 (18)
C3—N21.367 (3)Fe1—O1i2.1801 (18)
C3—C51.475 (4)N2—H20.8600
C4—O11.255 (3)O3—H30.8200
C4—O21.270 (3)O1W—H1W0.8498
C5—O41.206 (3)O1W—H2W0.8499
N1—C1—N2111.1 (2)O1Wi—Fe1—O190.82 (7)
N1—C1—H1124.4O1W—Fe1—O189.18 (7)
N2—C1—H1124.4N1—Fe1—O177.53 (8)
C3—C2—N1109.5 (2)N1i—Fe1—O1102.47 (8)
C3—C2—C4132.0 (2)O1Wi—Fe1—O1i89.18 (7)
N1—C2—C4118.4 (2)O1W—Fe1—O1i90.82 (7)
C2—C3—N2105.6 (2)N1—Fe1—O1i102.47 (8)
C2—C3—C5134.4 (2)N1i—Fe1—O1i77.53 (7)
N2—C3—C5120.0 (2)O1—Fe1—O1i179.999 (1)
O1—C4—O2124.6 (2)C1—N1—C2105.6 (2)
O1—C4—C2117.2 (2)C1—N1—Fe1142.71 (18)
O2—C4—C2118.2 (2)C2—N1—Fe1111.22 (17)
O4—C5—O3121.6 (3)C1—N2—C3108.2 (2)
O4—C5—C3121.9 (3)C1—N2—H2125.9
O3—C5—C3116.5 (3)C3—N2—H2125.9
O1Wi—Fe1—O1W179.998 (1)C4—O1—Fe1115.45 (16)
O1Wi—Fe1—N193.27 (8)C5—O3—H3109.5
O1W—Fe1—N186.73 (8)Fe1—O1W—H1W115.5
O1Wi—Fe1—N1i86.73 (8)Fe1—O1W—H2W115.7
O1W—Fe1—N1i93.27 (8)H1W—O1W—H2W105.2
N1—Fe1—N1i179.999 (1)
N1—C2—C3—N2−0.4 (3)O1Wi—Fe1—N1—C196.8 (3)
C4—C2—C3—N2−176.4 (3)O1W—Fe1—N1—C1−83.2 (3)
N1—C2—C3—C5176.3 (3)O1—Fe1—N1—C1−173.1 (3)
C4—C2—C3—C50.3 (5)O1i—Fe1—N1—C16.9 (3)
C3—C2—C4—O1174.6 (3)O1Wi—Fe1—N1—C2−93.03 (18)
N1—C2—C4—O1−1.1 (4)O1W—Fe1—N1—C286.97 (18)
C3—C2—C4—O2−5.5 (4)O1—Fe1—N1—C2−2.91 (16)
N1—C2—C4—O2178.8 (2)O1i—Fe1—N1—C2177.09 (16)
C2—C3—C5—O4−174.3 (3)N1—C1—N2—C30.1 (3)
N2—C3—C5—O41.9 (5)C2—C3—N2—C10.2 (3)
C2—C3—C5—O33.9 (5)C5—C3—N2—C1−177.1 (3)
N2—C3—C5—O3−179.8 (3)O2—C4—O1—Fe1178.5 (2)
N2—C1—N1—C2−0.3 (3)C2—C4—O1—Fe1−1.6 (3)
N2—C1—N1—Fe1170.2 (2)O1Wi—Fe1—O1—C495.72 (19)
C3—C2—N1—C10.4 (3)O1W—Fe1—O1—C4−84.28 (19)
C4—C2—N1—C1177.0 (2)N1—Fe1—O1—C42.55 (18)
C3—C2—N1—Fe1−173.45 (18)N1i—Fe1—O1—C4−177.45 (18)
C4—C2—N1—Fe13.2 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2···O3ii0.862.052.897 (3)169
O3—H3···O20.821.742.525 (3)160
O1W—H1W···O2iii0.851.942.744 (3)157
O1W—H2W···O1iv0.851.922.710 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O3i0.862.052.897 (3)169
O3—H3⋯O20.821.742.525 (3)160
O1W—H1W⋯O2ii0.851.942.744 (3)157
O1W—H2W⋯O1iii0.851.922.710 (3)155

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A two-dimensional manganese(II) coordination polymer: poly[[diaquamanganese(II)]-mu-4,4-bipyridine-kappa(2)N:N'-mu-(p-phenylenedioxydiacetato)-kappa2O:O'].

Authors:  Shan Gao; Ji-Wei Liu; Li-Hua Huo; Hui Zhao; Jing-Gui Zhao
Journal:  Acta Crystallogr C       Date:  2004-09-25       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Diversity of coordination architecture of metal 4,5-dicarboxyimidazole.

Authors:  Rui-Qin Fang; Xian-Ming Zhang
Journal:  Inorg Chem       Date:  2006-06-12       Impact factor: 5.165

4.  trans-Diaquabis(1H-imidazole-4,5-dicarboxylate-kappa2N3,O4)manganese(II).

Authors:  Chengbing Ma; Feng Chen; Changneng Chen; Qiutian Liu
Journal:  Acta Crystallogr C       Date:  2003-11-08       Impact factor: 1.172

  4 in total
  1 in total

1.  Triclinic modification of diaqua-bis-(5-carb-oxy-1H-imidazole-4-carboxyl-ato-κ(2)N(3),O(4))iron(II).

Authors:  Eriko Ohshima; Kazuki Yoshida; Kazumasa Sugiyama; Hidehiro Uekusa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-21
  1 in total

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