Literature DB >> 22903058

Fiber diffraction data indicate a hollow core for the Alzheimer's aβ 3-fold symmetric fibril.

Michele McDonald1, Hayden Box, Wen Bian, Amy Kendall, Robert Tycko, Gerald Stubbs.   

Abstract

Amyloid β protein (Aβ), the principal component of the extracellular plaques found in the brains of patients with Alzheimer's disease, forms fibrils well suited to structural study by X-ray fiber diffraction. Fiber diffraction patterns from the 40-residue form Aβ(1-40) confirm a number of features of a 3-fold symmetric Aβ model from solid-state NMR (ssNMR) but suggest that the fibrils have a hollow core not present in the original ssNMR models. Diffraction patterns calculated from a revised 3-fold hollow model with a more regular β-sheet structure are in much better agreement with the observed diffraction data than patterns calculated from the original ssNMR model. Refinement of a hollow-core model against ssNMR data led to a revised ssNMR model, similar to the fiber diffraction model.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22903058      PMCID: PMC3462308          DOI: 10.1016/j.jmb.2012.08.004

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  31 in total

1.  The Xplor-NIH NMR molecular structure determination package.

Authors:  Charles D Schwieters; John J Kuszewski; Nico Tjandra; G Marius Clore
Journal:  J Magn Reson       Date:  2003-01       Impact factor: 2.229

2.  Determining the critical nucleus and mechanism of fibril elongation of the Alzheimer's Abeta(1-40) peptide.

Authors:  Nicolas Lux Fawzi; Yuka Okabe; Eng-Hui Yap; Teresa Head-Gordon
Journal:  J Mol Biol       Date:  2006-10-07       Impact factor: 5.469

3.  The common architecture of cross-beta amyloid.

Authors:  Thomas R Jahn; O Sumner Makin; Kyle L Morris; Karen E Marshall; Pei Tian; Pawel Sikorski; Louise C Serpell
Journal:  J Mol Biol       Date:  2009-09-23       Impact factor: 5.469

4.  A new structural model of Aβ40 fibrils.

Authors:  Ivano Bertini; Leonardo Gonnelli; Claudio Luchinat; Jiafei Mao; Antonella Nesi
Journal:  J Am Chem Soc       Date:  2011-09-21       Impact factor: 15.419

5.  Molecular-level examination of Cu2+ binding structure for amyloid fibrils of 40-residue Alzheimer's β by solid-state NMR spectroscopy.

Authors:  Sudhakar Parthasarathy; Fei Long; Yifat Miller; Yiling Xiao; Dan McElheny; Kent Thurber; Buyong Ma; Ruth Nussinov; Yoshitaka Ishii
Journal:  J Am Chem Soc       Date:  2011-02-22       Impact factor: 15.419

6.  X-ray diffraction studies on amyloid filaments.

Authors:  E D Eanes; G G Glenner
Journal:  J Histochem Cytochem       Date:  1968-11       Impact factor: 2.479

7.  Alzheimer's disease: initial report of the purification and characterization of a novel cerebrovascular amyloid protein.

Authors:  G G Glenner; C W Wong
Journal:  Biochem Biophys Res Commun       Date:  1984-05-16       Impact factor: 3.575

8.  Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR.

Authors:  S K Straus; W R P Scott; C D Schwieters; D A Marvin
Journal:  Eur Biophys J       Date:  2010-11-17       Impact factor: 1.733

9.  Abeta(1-40) forms five distinct amyloid structures whose beta-sheet contents and fibril stabilities are correlated.

Authors:  Ravindra Kodali; Angela D Williams; Saketh Chemuru; Ronald Wetzel
Journal:  J Mol Biol       Date:  2010-06-18       Impact factor: 5.469

10.  The CCP13 FibreFix program suite: semi-automated analysis of diffraction patterns from non-crystalline materials.

Authors:  Ganeshalingam Rajkumar; Hind A Al-Khayat; Felicity Eakins; Carlo Knupp; John M Squire
Journal:  J Appl Crystallogr       Date:  2007-01-12       Impact factor: 3.304

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  21 in total

1.  Water Distribution, Dynamics, and Interactions with Alzheimer's β-Amyloid Fibrils Investigated by Solid-State NMR.

Authors:  Tuo Wang; Hyunil Jo; William F DeGrado; Mei Hong
Journal:  J Am Chem Soc       Date:  2017-04-21       Impact factor: 15.419

2.  MOMD Analysis of NMR Line Shapes from Aβ-Amyloid Fibrils: A New Tool for Characterizing Molecular Environments in Protein Aggregates.

Authors:  Eva Meirovitch; Zhichun Liang; Jack H Freed
Journal:  J Phys Chem B       Date:  2018-05-02       Impact factor: 2.991

3.  Structural studies of truncated forms of the prion protein PrP.

Authors:  William Wan; Holger Wille; Jan Stöhr; Amy Kendall; Wen Bian; Michele McDonald; Sarah Tiggelaar; Joel C Watts; Stanley B Prusiner; Gerald Stubbs
Journal:  Biophys J       Date:  2015-03-24       Impact factor: 4.033

4.  Fast Motions of Key Methyl Groups in Amyloid-β Fibrils.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Matthew A Clark; Isaac B Falconer; Gina L Hoatson; Wei Qiang
Journal:  Biophys J       Date:  2016-11-15       Impact factor: 4.033

Review 5.  Molecular structures of amyloid and prion fibrils: consensus versus controversy.

Authors:  Robert Tycko; Reed B Wickner
Journal:  Acc Chem Res       Date:  2013-01-07       Impact factor: 22.384

6.  Polymorph-specific kinetics and thermodynamics of β-amyloid fibril growth.

Authors:  Wei Qiang; Kevin Kelley; Robert Tycko
Journal:  J Am Chem Soc       Date:  2013-04-29       Impact factor: 15.419

7.  Flexibility and Solvation of Amyloid-β Hydrophobic Core.

Authors:  Liliya Vugmeyster; Matthew A Clark; Isaac B Falconer; Dmitry Ostrovsky; Donald Gantz; Wei Qiang; Gina L Hoatson
Journal:  J Biol Chem       Date:  2016-07-11       Impact factor: 5.157

Review 8.  Physical and structural basis for polymorphism in amyloid fibrils.

Authors:  Robert Tycko
Journal:  Protein Sci       Date:  2014-09-13       Impact factor: 6.725

9.  Molecular and ultrastructural analysis of forisome subunits reveals the principles of forisome assembly.

Authors:  Boje Müller; Sira Groscurth; Matthias Menzel; Boris A Rüping; Richard M Twyman; Dirk Prüfer; Gundula A Noll
Journal:  Ann Bot       Date:  2014-04-02       Impact factor: 4.357

10.  Phenyl-Ring Dynamics in Amyloid Fibrils and Proteins: The Microscopic-Order-Macroscopic-Disorder Perspective.

Authors:  Eva Meirovitch; Zhichun Liang; Jack H Freed
Journal:  J Phys Chem B       Date:  2018-09-10       Impact factor: 2.991

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