Literature DB >> 22897250

Structure-based coarse-graining in liquid slabs.

Mara Jochum1, Denis Andrienko, Kurt Kremer, Christine Peter.   

Abstract

Structure-based coarse-graining relies on matching the pair correlation functions of a reference (atomistic) and a coarse-grained system. As such, it is designed for systems with uniform density distributions. Here, we demonstrate how it can be generalized for inhomogeneous systems by coarse-graining slabs of liquid water and methanol in vacuum, as well as a single benzene molecule at the water-vacuum interface. Our conclusion is that coarse-graining performed in inhomogeneous systems improves thermodynamic properties and the structure of interfaces without significant alterations to the local structure of the bulk liquid.

Entities:  

Year:  2012        PMID: 22897250     DOI: 10.1063/1.4742067

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

1.  Experimental and theoretical evidence for bilayer-by-bilayer surface melting of crystalline ice.

Authors:  M Alejandra Sánchez; Tanja Kling; Tatsuya Ishiyama; Marc-Jan van Zadel; Patrick J Bisson; Markus Mezger; Mara N Jochum; Jenée D Cyran; Wilbert J Smit; Huib J Bakker; Mary Jane Shultz; Akihiro Morita; Davide Donadio; Yuki Nagata; Mischa Bonn; Ellen H G Backus
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-12       Impact factor: 11.205

2.  More than the sum of its parts: coarse-grained peptide-lipid interactions from a simple cross-parametrization.

Authors:  Tristan Bereau; Zun-Jing Wang; Markus Deserno
Journal:  J Chem Phys       Date:  2014-03-21       Impact factor: 3.488

3.  Analytical theory of the hydrophobic effect of solutes in water.

Authors:  Tomaz Urbic; Ken A Dill
Journal:  Phys Rev E       Date:  2017-09-01       Impact factor: 2.529

  3 in total

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