Literature DB >> 22892528

Missense mutation in the ATPase, aminophospholipid transporter protein ATP8A2 is associated with cerebellar atrophy and quadrupedal locomotion.

Onur Emre Onat1, Suleyman Gulsuner, Kaya Bilguvar, Ayse Nazli Basak, Haluk Topaloglu, Meliha Tan, Uner Tan, Murat Gunel, Tayfun Ozcelik.   

Abstract

Cerebellar ataxia, mental retardation and dysequilibrium syndrome is a rare and heterogeneous condition. We investigated a consanguineous family from Turkey with four affected individuals exhibiting the condition. Homozygosity mapping revealed that several shared homozygous regions, including chromosome 13q12. Targeted next-generation sequencing of an affected individual followed by segregation analysis, population screening and prediction approaches revealed a novel missense variant, p.I376M, in ATP8A2. The mutation lies in a highly conserved C-terminal transmembrane region of E1 E2 ATPase domain. The ATP8A2 gene is mainly expressed in brain and development, in particular cerebellum. Interestingly, an unrelated individual has been identified, in whom mental retardation and severe hypotonia is associated with a de novo t(10;13) balanced translocation resulting with the disruption of ATP8A2. These findings suggest that ATP8A2 is involved in the development of the cerebro-cerebellar structures required for posture and gait in humans.

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Year:  2012        PMID: 22892528      PMCID: PMC3573203          DOI: 10.1038/ejhg.2012.170

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  38 in total

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Authors:  Jana Marie Schwarz; Christian Rödelsperger; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2010-08       Impact factor: 28.547

3.  Homozygosity mapping and targeted genomic sequencing reveal the gene responsible for cerebellar hypoplasia and quadrupedal locomotion in a consanguineous kindred.

Authors:  Suleyman Gulsuner; Ayse Begum Tekinay; Katja Doerschner; Huseyin Boyaci; Kaya Bilguvar; Hilal Unal; Aslihan Ors; O Emre Onat; Ergin Atalar; A Nazli Basak; Haluk Topaloglu; Tulay Kansu; Meliha Tan; Uner Tan; Murat Gunel; Tayfun Ozcelik
Journal:  Genome Res       Date:  2011-09-01       Impact factor: 9.043

4.  Disruption of the ATP8A2 gene in a patient with a t(10;13) de novo balanced translocation and a severe neurological phenotype.

Authors:  Pierre Cacciagli; Marie-Reine Haddad; Cécile Mignon-Ravix; Bilal El-Waly; Anne Moncla; Chantal Missirian; Brigitte Chabrol; Laurent Villard
Journal:  Eur J Hum Genet       Date:  2010-08-04       Impact factor: 4.246

5.  Autosomal recessive lethal congenital contractural syndrome type 4 (LCCS4) caused by a mutation in MYBPC1.

Authors:  Barak Markus; Ginat Narkis; Daniella Landau; Ruth Z Birk; Idan Cohen; Ohad S Birk
Journal:  Hum Mutat       Date:  2012-06-07       Impact factor: 4.878

Review 6.  Interplay of proteins and lipids in generating membrane curvature.

Authors:  Todd R Graham; Michael M Kozlov
Journal:  Curr Opin Cell Biol       Date:  2010-05-31       Impact factor: 8.382

7.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

8.  BEDTools: a flexible suite of utilities for comparing genomic features.

Authors:  Aaron R Quinlan; Ira M Hall
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Authors:  Paul Flicek; M Ridwan Amode; Daniel Barrell; Kathryn Beal; Simon Brent; Yuan Chen; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Leo Gordon; Maurice Hendrix; Thibaut Hourlier; Nathan Johnson; Andreas Kähäri; Damian Keefe; Stephen Keenan; Rhoda Kinsella; Felix Kokocinski; Eugene Kulesha; Pontus Larsson; Ian Longden; William McLaren; Bert Overduin; Bethan Pritchard; Harpreet Singh Riat; Daniel Rios; Graham R S Ritchie; Magali Ruffier; Michael Schuster; Daniel Sobral; Giulietta Spudich; Y Amy Tang; Stephen Trevanion; Jana Vandrovcova; Albert J Vilella; Simon White; Steven P Wilder; Amonida Zadissa; Jorge Zamora; Bronwen L Aken; Ewan Birney; Fiona Cunningham; Ian Dunham; Richard Durbin; Xosé M Fernández-Suarez; Javier Herrero; Tim J P Hubbard; Anne Parker; Glenn Proctor; Jan Vogel; Stephen M J Searle
Journal:  Nucleic Acids Res       Date:  2010-11-02       Impact factor: 16.971

10.  Identifying a high fraction of the human genome to be under selective constraint using GERP++.

Authors:  Eugene V Davydov; David L Goode; Marina Sirota; Gregory M Cooper; Arend Sidow; Serafim Batzoglou
Journal:  PLoS Comput Biol       Date:  2010-12-02       Impact factor: 4.475

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  57 in total

1.  Directed evolution of a sphingomyelin flippase reveals mechanism of substrate backbone discrimination by a P4-ATPase.

Authors:  Bartholomew P Roland; Todd R Graham
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-18       Impact factor: 11.205

2.  Yeast and human P4-ATPases transport glycosphingolipids using conserved structural motifs.

Authors:  Bartholomew P Roland; Tomoki Naito; Jordan T Best; Cayetana Arnaiz-Yépez; Hiroyuki Takatsu; Roger J Yu; Hye-Won Shin; Todd R Graham
Journal:  J Biol Chem       Date:  2018-12-10       Impact factor: 5.157

3.  Endosomal lipid flippases and their related diseases.

Authors:  Shoken Lee; Tomohiko Taguchi; Hiroyuki Arai
Journal:  Channels (Austin)       Date:  2015-06-17       Impact factor: 2.581

4.  Phosphatidylserine flipping by the P4-ATPase ATP8A2 is electrogenic.

Authors:  Francesco Tadini-Buoninsegni; Stine A Mikkelsen; Louise S Mogensen; Robert S Molday; Jens Peter Andersen
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-01       Impact factor: 11.205

5.  Asparagine 905 of the mammalian phospholipid flippase ATP8A2 is essential for lipid substrate-induced activation of ATP8A2 dephosphorylation.

Authors:  Stine A Mikkelsen; Louise S Mogensen; Bente Vilsen; Robert S Molday; Anna L Vestergaard; Jens Peter Andersen
Journal:  J Biol Chem       Date:  2019-02-13       Impact factor: 5.157

6.  Arl1 gets into the membrane remodeling business with a flippase and ArfGEF.

Authors:  Todd R Graham
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

7.  Phospholipid flippase ATP8A2 is required for normal visual and auditory function and photoreceptor and spiral ganglion cell survival.

Authors:  Jonathan A Coleman; Xianjun Zhu; Hidayat R Djajadi; Laurie L Molday; Richard S Smith; Richard T Libby; Simon W M John; Robert S Molday
Journal:  J Cell Sci       Date:  2014-01-10       Impact factor: 5.285

8.  Identification and functional analyses of disease-associated P4-ATPase phospholipid flippase variants in red blood cells.

Authors:  Angela Y Liou; Laurie L Molday; Jiao Wang; Jens Peter Andersen; Robert S Molday
Journal:  J Biol Chem       Date:  2019-03-08       Impact factor: 5.157

Review 9.  Decoding P4-ATPase substrate interactions.

Authors:  Bartholomew P Roland; Todd R Graham
Journal:  Crit Rev Biochem Mol Biol       Date:  2016-10-04       Impact factor: 8.250

10.  Type IV P-type ATPases distinguish mono- versus diacyl phosphatidylserine using a cytofacial exit gate in the membrane domain.

Authors:  Ryan D Baldridge; Peng Xu; Todd R Graham
Journal:  J Biol Chem       Date:  2013-05-24       Impact factor: 5.157

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