Literature DB >> 21885617

Homozygosity mapping and targeted genomic sequencing reveal the gene responsible for cerebellar hypoplasia and quadrupedal locomotion in a consanguineous kindred.

Suleyman Gulsuner1, Ayse Begum Tekinay, Katja Doerschner, Huseyin Boyaci, Kaya Bilguvar, Hilal Unal, Aslihan Ors, O Emre Onat, Ergin Atalar, A Nazli Basak, Haluk Topaloglu, Tulay Kansu, Meliha Tan, Uner Tan, Murat Gunel, Tayfun Ozcelik.   

Abstract

The biological basis for the development of the cerebro-cerebellar structures required for posture and gait in humans is poorly understood. We investigated a large consanguineous family from Turkey exhibiting an extremely rare phenotype associated with quadrupedal locomotion, mental retardation, and cerebro-cerebellar hypoplasia, linked to a 7.1-Mb region of homozygosity on chromosome 17p13.1-13.3. Diffusion weighted imaging and fiber tractography of the patients' brains revealed morphological abnormalities in the cerebellum and corpus callosum, in particular atrophy of superior, middle, and inferior peduncles of the cerebellum. Structural magnetic resonance imaging showed additional morphometric abnormalities in several cortical areas, including the corpus callosum, precentral gyrus, and Brodmann areas BA6, BA44, and BA45. Targeted sequencing of the entire homozygous region in three affected individuals and two obligate carriers uncovered a private missense mutation, WDR81 p.P856L, which cosegregated with the condition in the extended family. The mutation lies in a highly conserved region of WDR81, flanked by an N-terminal BEACH domain and C-terminal WD40 beta-propeller domains. WDR81 is predicted to be a transmembrane protein. It is highly expressed in the cerebellum and corpus callosum, in particular in the Purkinje cell layer of the cerebellum. WDR81 represents the third gene, after VLDLR and CA8, implicated in quadrupedal locomotion in humans.

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Year:  2011        PMID: 21885617      PMCID: PMC3227090          DOI: 10.1101/gr.126110.111

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  45 in total

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Journal:  Am J Hum Genet       Date:  2007-07-25       Impact factor: 11.025

2.  Bayesian analysis of neuroimaging data in FSL.

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3.  Mapping short DNA sequencing reads and calling variants using mapping quality scores.

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Journal:  Genome Res       Date:  2008-08-19       Impact factor: 9.043

4.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

5.  The Drosophila BEACH family protein, blue cheese, links lysosomal axon transport with motor neuron degeneration.

Authors:  Angeline Lim; Rachel Kraut
Journal:  J Neurosci       Date:  2009-01-28       Impact factor: 6.167

6.  Transcriptome and proteome analysis of early embryonic mouse brain development.

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Journal:  Proteomics       Date:  2008-03       Impact factor: 3.984

Review 7.  New perspectives for the elucidation of genetic disorders.

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8.  A role for LYNX2 in anxiety-related behavior.

Authors:  Ayse B Tekinay; Yi Nong; Julie M Miwa; Ivo Lieberam; Ines Ibanez-Tallon; Paul Greengard; Nathaniel Heintz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-25       Impact factor: 11.205

9.  Mutations in the very low-density lipoprotein receptor VLDLR cause cerebellar hypoplasia and quadrupedal locomotion in humans.

Authors:  Tayfun Ozcelik; Nurten Akarsu; Elif Uz; Safak Caglayan; Suleyman Gulsuner; Onur Emre Onat; Meliha Tan; Uner Tan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-07       Impact factor: 11.205

10.  CA8 mutations cause a novel syndrome characterized by ataxia and mild mental retardation with predisposition to quadrupedal gait.

Authors:  Seval Türkmen; Gao Guo; Masoud Garshasbi; Katrin Hoffmann; Amjad J Alshalah; Claudia Mischung; Andreas Kuss; Nicholas Humphrey; Stefan Mundlos; Peter N Robinson
Journal:  PLoS Genet       Date:  2009-05-22       Impact factor: 6.020

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  29 in total

1.  Missense mutation in the ATPase, aminophospholipid transporter protein ATP8A2 is associated with cerebellar atrophy and quadrupedal locomotion.

Authors:  Onur Emre Onat; Suleyman Gulsuner; Kaya Bilguvar; Ayse Nazli Basak; Haluk Topaloglu; Meliha Tan; Uner Tan; Murat Gunel; Tayfun Ozcelik
Journal:  Eur J Hum Genet       Date:  2012-08-15       Impact factor: 4.246

2.  Autophagy in Neurons.

Authors:  Andrea K H Stavoe; Erika L F Holzbaur
Journal:  Annu Rev Cell Dev Biol       Date:  2019-07-23       Impact factor: 13.827

3.  Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting microtubule stability.

Authors:  Martin W Breuss; Thai Nguyen; Anjana Srivatsan; Ines Leca; Guoling Tian; Tanja Fritz; Andi H Hansen; Damir Musaev; Jennifer McEvoy-Venneri; Kiely N James; Rasim O Rosti; Eric Scott; Uner Tan; Richard D Kolodner; Nicholas J Cowan; David A Keays; Joseph G Gleeson
Journal:  Hum Mol Genet       Date:  2017-01-15       Impact factor: 6.150

Review 4.  The BEACH is hot: a LYST of emerging roles for BEACH-domain containing proteins in human disease.

Authors:  Andrew R Cullinane; Alejandro A Schäffer; Marjan Huizing
Journal:  Traffic       Date:  2013-04-24       Impact factor: 6.215

5.  Very mild features of dysequilibrium syndrome associated with a novel VLDLR missense mutation.

Authors:  Alessia Micalizzi; Isabella Moroni; Monia Ginevrino; Tommaso Biagini; Tommaso Mazza; Marta Romani; Enza Maria Valente
Journal:  Neurogenetics       Date:  2016-06-02       Impact factor: 2.660

6.  WDR81 Gene Silencing Can Reduce Exosome Levels in Human U87-MG Glioblastoma Cells.

Authors:  Amin Tadayoni Nia; Zahra Bazi; Ayyoob Khosravi; Morteza Oladnabi
Journal:  J Mol Neurosci       Date:  2021-05-06       Impact factor: 3.444

Review 7.  Use of next-generation sequencing and other whole-genome strategies to dissect neurological disease.

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Journal:  Nat Rev Neurosci       Date:  2012-06-20       Impact factor: 34.870

Review 8.  Next-generation sequencing and prenatal 'omics: advanced diagnostics and new insights into human development.

Authors:  Neeta L Vora; Lisa Hui
Journal:  Genet Med       Date:  2018-07-22       Impact factor: 8.822

9.  Fetal brain arrest broadens the spectrum of WDR81-related developmental brain malformations.

Authors:  Mohamed S Abdel-Hamid; Sahar Sabry; Sherif F Abdel-Ghafar; Sara H El-Dessouky; Ghada M H Abdel-Salam
Journal:  Neurogenetics       Date:  2021-08-02       Impact factor: 2.660

10.  Genomics of human congenital hydrocephalus.

Authors:  Adam J Kundishora; Amrita K Singh; Garrett Allington; Phan Q Duy; Jian Ryou; Seth L Alper; Sheng Chih Jin; Kristopher T Kahle
Journal:  Childs Nerv Syst       Date:  2021-07-07       Impact factor: 1.475

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