Literature DB >> 22888192

Dokdonella kunshanensis sp. nov., isolated from activated sludge, and emended description of the genus Dokdonella.

Yi Li1, Jun Zhang2,1, Qing Chen1, Guiqin Yang3, Shu Cai1, Jian He1, Shungui Zhou3, Shun-Peng Li1.   

Abstract

A gram-negative, aerobic, non-motile, non-spore-forming rod, designated DC-3(T), was isolated from activated sludge of a wastewater treatment plant in China. Comparative 16S rRNA gene sequence analysis showed that strain DC-3(T) belonged to the family Xanthomonadaceae and formed a lineage within the genus Dokdonella. Strain DC-3(T) shared the highest 16S rRNA gene sequence similarity with Dokdonella soli KIS28-6(T) (97.1 %) and Dokdonella fugitiva A3(T) (97.1 %). The G+C content of the genomic DNA was 71.5 mol%. The major respiratory quinone was Q-8 and the major fatty acids were iso-C17 : 1ω9c (31.6 %), iso-C15 : 0 (12.6 %), iso-C16 : 0 (21.3 %), iso-C17 : 0 (13.1 %) and iso-C11 : 0 3-OH (6.5 %), which supported the affiliation of strain DC-3(T) with the genus Dokdonella. DNA-DNA relatedness between strain DC-3(T) and its closest phylogenetic neighbours was <30 %. The results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain DC-3(T) from the recognized species of the genus Dokdonella. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain DC-3(T) represents a novel species of the genus Dokdonella, for which the name Dokdonella kunshanensis sp. nov. is proposed. The type strain is DC-3(T) ( = CCTCC AB 2011179(T)  = KACC 16511(T)). The description of the genus Dokdonella is also emended.

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Year:  2012        PMID: 22888192     DOI: 10.1099/ijs.0.041798-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Global diversity and biogeography of bacterial communities in wastewater treatment plants.

Authors:  Linwei Wu; Daliang Ning; Bing Zhang; Yong Li; Ping Zhang; Xiaoyu Shan; Qiuting Zhang; Mathew Robert Brown; Zhenxin Li; Joy D Van Nostrand; Fangqiong Ling; Naijia Xiao; Ya Zhang; Julia Vierheilig; George F Wells; Yunfeng Yang; Ye Deng; Qichao Tu; Aijie Wang; Tong Zhang; Zhili He; Jurg Keller; Per H Nielsen; Pedro J J Alvarez; Craig S Criddle; Michael Wagner; James M Tiedje; Qiang He; Thomas P Curtis; David A Stahl; Lisa Alvarez-Cohen; Bruce E Rittmann; Xianghua Wen; Jizhong Zhou
Journal:  Nat Microbiol       Date:  2019-05-13       Impact factor: 17.745

2.  Dokdonella koreensis bacteremia: A case report and review of the literature.

Authors:  Boeun Lee; Mitchell R Weinstein
Journal:  Can J Infect Dis Med Microbiol       Date:  2014-09       Impact factor: 2.471

  2 in total

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