Literature DB >> 22885787

A role for the root cap in root branching revealed by the non-auxin probe naxillin.

Bert De Rybel1, Dominique Audenaert, Wei Xuan, Paul Overvoorde, Lucia C Strader, Stefan Kepinski, Rebecca Hoye, Ronald Brisbois, Boris Parizot, Steffen Vanneste, Xing Liu, Alison Gilday, Ian A Graham, Long Nguyen, Leentje Jansen, Maria Fransiska Njo, Dirk Inzé, Bonnie Bartel, Tom Beeckman.   

Abstract

The acquisition of water and nutrients by plant roots is a fundamental aspect of agriculture and strongly depends on root architecture. Root branching and expansion of the root system is achieved through the development of lateral roots and is to a large extent controlled by the plant hormone auxin. However, the pleiotropic effects of auxin or auxin-like molecules on root systems complicate the study of lateral root development. Here we describe a small-molecule screen in Arabidopsis thaliana that identified naxillin as what is to our knowledge the first non-auxin-like molecule that promotes root branching. By using naxillin as a chemical tool, we identified a new function for root cap-specific conversion of the auxin precursor indole-3-butyric acid into the active auxin indole-3-acetic acid and uncovered the involvement of the root cap in root branching. Delivery of an auxin precursor in peripheral tissues such as the root cap might represent an important mechanism shaping root architecture.

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Year:  2012        PMID: 22885787      PMCID: PMC3735367          DOI: 10.1038/nchembio.1044

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  49 in total

Review 1.  Auxin: a trigger for change in plant development.

Authors:  Steffen Vanneste; Jirí Friml
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

Review 2.  The past, present, and future of chemical biology in auxin research.

Authors:  Bert De Rybel; Dominique Audenaert; Tom Beeckman; Stefan Kepinski
Journal:  ACS Chem Biol       Date:  2009-12-18       Impact factor: 5.100

3.  Conversion of endogenous indole-3-butyric acid to indole-3-acetic acid drives cell expansion in Arabidopsis seedlings.

Authors:  Lucia C Strader; Angela Hendrickson Culler; Jerry D Cohen; Bonnie Bartel
Journal:  Plant Physiol       Date:  2010-06-18       Impact factor: 8.340

4.  The multifunctional protein in peroxisomal beta-oxidation: structure and substrate specificity of the Arabidopsis thaliana protein MFP2.

Authors:  Susan Arent; Caspar E Christensen; Valerie E Pye; Allan Nørgaard; Anette Henriksen
Journal:  J Biol Chem       Date:  2010-05-12       Impact factor: 5.157

5.  Oscillating gene expression determines competence for periodic Arabidopsis root branching.

Authors:  Miguel A Moreno-Risueno; Jaimie M Van Norman; Antonio Moreno; Jingyuan Zhang; Sebastian E Ahnert; Philip N Benfey
Journal:  Science       Date:  2010-09-10       Impact factor: 47.728

6.  A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity.

Authors:  Bert De Rybel; Valya Vassileva; Boris Parizot; Marlies Demeulenaere; Wim Grunewald; Dominique Audenaert; Jelle Van Campenhout; Paul Overvoorde; Leentje Jansen; Steffen Vanneste; Barbara Möller; Michael Wilson; Tara Holman; Gert Van Isterdael; Géraldine Brunoud; Marnik Vuylsteke; Teva Vernoux; Lieven De Veylder; Dirk Inzé; Dolf Weijers; Malcolm J Bennett; Tom Beeckman
Journal:  Curr Biol       Date:  2010-09-30       Impact factor: 10.834

7.  The Arabidopsis PLEIOTROPIC DRUG RESISTANCE8/ABCG36 ATP binding cassette transporter modulates sensitivity to the auxin precursor indole-3-butyric acid.

Authors:  Lucia C Strader; Bonnie Bartel
Journal:  Plant Cell       Date:  2009-07-31       Impact factor: 11.277

8.  Arabidopsis PIS1 encodes the ABCG37 transporter of auxinic compounds including the auxin precursor indole-3-butyric acid.

Authors:  Kamil Ruzicka; Lucia C Strader; Aurélien Bailly; Haibing Yang; Joshua Blakeslee; Lukasz Langowski; Eliska Nejedlá; Hironori Fujita; Hironori Itoh; Kunihiko Syono; Jan Hejátko; William M Gray; Enrico Martinoia; Markus Geisler; Bonnie Bartel; Angus S Murphy; Jirí Friml
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-24       Impact factor: 11.205

9.  Peroxisome-associated matrix protein degradation in Arabidopsis.

Authors:  Matthew J Lingard; Melanie Monroe-Augustus; Bonnie Bartel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-25       Impact factor: 11.205

Review 10.  Arabidopsis lateral root development: an emerging story.

Authors:  Benjamin Péret; Bert De Rybel; Ilda Casimiro; Eva Benková; Ranjan Swarup; Laurent Laplaze; Tom Beeckman; Malcolm J Bennett
Journal:  Trends Plant Sci       Date:  2009-06-24       Impact factor: 18.313

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  43 in total

1.  Origin of the concept of the quiescent centre of plant roots.

Authors:  Peter W Barlow
Journal:  Protoplasma       Date:  2015-10-10       Impact factor: 3.356

2.  Auxin and Cellular Elongation.

Authors:  Silvia Melina Velasquez; Elke Barbez; Jürgen Kleine-Vehn; José M Estevez
Journal:  Plant Physiol       Date:  2016-01-19       Impact factor: 8.340

Review 3.  Auxin activity: Past, present, and future.

Authors:  Tara A Enders; Lucia C Strader
Journal:  Am J Bot       Date:  2015-01-29       Impact factor: 3.844

Review 4.  Plant Chemical Genetics: From Phenotype-Based Screens to Synthetic Biology.

Authors:  Wim Dejonghe; Eugenia Russinova
Journal:  Plant Physiol       Date:  2017-03-08       Impact factor: 8.340

5.  A chemical inhibitor of jasmonate signaling targets JAR1 in Arabidopsis thaliana.

Authors:  Christian Meesters; Timon Mönig; Julian Oeljeklaus; Daniel Krahn; Corey S Westfall; Bettina Hause; Joseph M Jez; Markus Kaiser; Erich Kombrink
Journal:  Nat Chem Biol       Date:  2014-08-17       Impact factor: 15.040

6.  Chemical Genetics Uncovers Novel Inhibitors of Lignification, Including p-Iodobenzoic Acid Targeting CINNAMATE-4-HYDROXYLASE.

Authors:  Dorien Van de Wouwer; Ruben Vanholme; Raphaël Decou; Geert Goeminne; Dominique Audenaert; Long Nguyen; René Höfer; Edouard Pesquet; Bartel Vanholme; Wout Boerjan
Journal:  Plant Physiol       Date:  2016-08-02       Impact factor: 8.340

7.  Optimizing the Use of a Liquid Handling Robot to Conduct a High Throughput Forward Chemical Genetics Screen of Arabidopsis thaliana.

Authors:  B K Amos; Victoria G Pook; Seth Debolt
Journal:  J Vis Exp       Date:  2018-04-30       Impact factor: 1.355

Review 8.  Synthetic molecules: helping to unravel plant signal transduction.

Authors:  Wei Xuan; Evan Murphy; Tom Beeckman; Dominique Audenaert; Ive De Smet
Journal:  J Chem Biol       Date:  2013-03-03

Review 9.  Auxin biosynthesis and storage forms.

Authors:  David A Korasick; Tara A Enders; Lucia C Strader
Journal:  J Exp Bot       Date:  2013-04-11       Impact factor: 6.992

10.  Phenyl-adenine, identified in a LIGHT-DEPENDENT SHORT HYPOCOTYLS4-assisted chemical screen, is a potent compound for shoot regeneration through the inhibition of CYTOKININ OXIDASE/DEHYDROGENASE activity.

Authors:  Hans Motte; Petr Galuszka; Lukáš Spíchal; Petr Tarkowski; Ondrej Plíhal; Mária Šmehilová; Pavel Jaworek; Danny Vereecke; Stefaan Werbrouck; Danny Geelen
Journal:  Plant Physiol       Date:  2013-01-03       Impact factor: 8.340

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