Literature DB >> 22884324

Functional significance of isoform diversification in the protocadherin gamma gene cluster.

Weisheng V Chen1, Francisco J Alvarez, Julie L Lefebvre, Brad Friedman, Chiamaka Nwakeze, Eric Geiman, Courtney Smith, Chan Aye Thu, Juan Carlos Tapia, Bosiljka Tasic, Joshua R Sanes, Tom Maniatis.   

Abstract

The mammalian Protocadherin (Pcdh) alpha, beta, and gamma gene clusters encode a large family of cadherin-like transmembrane proteins that are differentially expressed in individual neurons. The 22 isoforms of the Pcdhg gene cluster are diversified into A-, B-, and C-types, and the C-type isoforms differ from all other clustered Pcdhs in sequence and expression. Here, we show that mice lacking the three C-type isoforms are phenotypically indistinguishable from the Pcdhg null mutants, displaying virtually identical cellular and synaptic alterations resulting from neuronal apoptosis. By contrast, mice lacking three A-type isoforms exhibit no detectable phenotypes. Remarkably, however, genetically blocking apoptosis rescues the neonatal lethality of the C-type isoform knockouts, but not that of the Pcdhg null mutants. We conclude that the role of the Pcdhg gene cluster in neuronal survival is primarily, if not specifically, mediated by its C-type isoforms, whereas a separate role essential for postnatal development, likely in neuronal wiring, requires isoform diversity.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22884324      PMCID: PMC3426296          DOI: 10.1016/j.neuron.2012.06.039

Source DB:  PubMed          Journal:  Neuron        ISSN: 0896-6273            Impact factor:   17.173


  33 in total

1.  Molecular mechanisms governing Pcdh-gamma gene expression: evidence for a multiple promoter and cis-alternative splicing model.

Authors:  Xiaozhong Wang; Hong Su; Allan Bradley
Journal:  Genes Dev       Date:  2002-08-01       Impact factor: 11.361

2.  Promoter choice determines splice site selection in protocadherin alpha and gamma pre-mRNA splicing.

Authors:  Bosiljka Tasic; Christoph E Nabholz; Kristin K Baldwin; Youngwook Kim; Erroll H Rueckert; Scott A Ribich; Paula Cramer; Qiang Wu; Richard Axel; Tom Maniatis
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

3.  Combinatorial homophilic interaction between gamma-protocadherin multimers greatly expands the molecular diversity of cell adhesion.

Authors:  Dietmar Schreiner; Joshua A Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

4.  Proteomics analysis reveals overlapping functions of clustered protocadherins.

Authors:  Meng-Hsuan Han; Chengyi Lin; Shuxia Meng; Xiaozhong Wang
Journal:  Mol Cell Proteomics       Date:  2009-10-20       Impact factor: 5.911

5.  Identification of the cluster control region for the protocadherin-beta genes located beyond the protocadherin-gamma cluster.

Authors:  Shinnichi Yokota; Teruyoshi Hirayama; Keizo Hirano; Ryosuke Kaneko; Shunsuke Toyoda; Yoshimi Kawamura; Masumi Hirabayashi; Takahiro Hirabayashi; Takeshi Yagi
Journal:  J Biol Chem       Date:  2011-07-19       Impact factor: 5.157

Review 6.  Chemoaffinity revisited: dscams, protocadherins, and neural circuit assembly.

Authors:  S Lawrence Zipursky; Joshua R Sanes
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

7.  Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.

Authors:  Q Wu; T Zhang; J F Cheng; Y Kim; J Grimwood; J Schmutz; M Dickson; J P Noonan; M Q Zhang; R M Myers; T Maniatis
Journal:  Genome Res       Date:  2001-03       Impact factor: 9.043

8.  Phosphorylation of protocadherin proteins by the receptor tyrosine kinase Ret.

Authors:  Stefanie S Schalm; Bryan A Ballif; Sean M Buchanan; Greg R Phillips; Tom Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-25       Impact factor: 11.205

9.  Protocadherin-alpha family is required for serotonergic projections to appropriately innervate target brain areas.

Authors:  Shota Katori; Shun Hamada; Yukiko Noguchi; Emi Fukuda; Toshifumi Yamamoto; Hideko Yamamoto; Sonoko Hasegawa; Takeshi Yagi
Journal:  J Neurosci       Date:  2009-07-22       Impact factor: 6.167

10.  A differential developmental pattern of spinal interneuron apoptosis during synaptogenesis: insights from genetic analyses of the protocadherin-gamma gene cluster.

Authors:  Tuhina Prasad; Xiaozhong Wang; Paul A Gray; Joshua A Weiner
Journal:  Development       Date:  2008-12       Impact factor: 6.868

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  53 in total

Review 1.  Regulation of Wnt signaling by protocadherins.

Authors:  Kar Men Mah; Joshua A Weiner
Journal:  Semin Cell Dev Biol       Date:  2017-08-01       Impact factor: 7.727

2.  CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.

Authors:  Ya Guo; Quan Xu; Daniele Canzio; Jia Shou; Jinhuan Li; David U Gorkin; Inkyung Jung; Haiyang Wu; Yanan Zhai; Yuanxiao Tang; Yichao Lu; Yonghu Wu; Zhilian Jia; Wei Li; Michael Q Zhang; Bing Ren; Adrian R Krainer; Tom Maniatis; Qiang Wu
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

Review 3.  Clustered protocadherins.

Authors:  Weisheng V Chen; Tom Maniatis
Journal:  Development       Date:  2013-08       Impact factor: 6.868

4.  Structural Basis of Diverse Homophilic Recognition by Clustered α- and β-Protocadherins.

Authors:  Kerry Marie Goodman; Rotem Rubinstein; Chan Aye Thu; Fabiana Bahna; Seetha Mannepalli; Göran Ahlsén; Chelsea Rittenhouse; Tom Maniatis; Barry Honig; Lawrence Shapiro
Journal:  Neuron       Date:  2016-05-05       Impact factor: 17.173

Review 5.  Regulation of neural circuit formation by protocadherins.

Authors:  Stacey L Peek; Kar Men Mah; Joshua A Weiner
Journal:  Cell Mol Life Sci       Date:  2017-06-19       Impact factor: 9.261

6.  CTCF/cohesin-mediated DNA looping is required for protocadherin α promoter choice.

Authors:  Ya Guo; Kevin Monahan; Haiyang Wu; Jason Gertz; Katherine E Varley; Wei Li; Richard M Myers; Tom Maniatis; Qiang Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-30       Impact factor: 11.205

7.  Clustered gamma-protocadherins regulate cortical interneuron programmed cell death.

Authors:  Walter R Mancia Leon; Julien Spatazza; Benjamin Rakela; Ankita Chatterjee; Viraj Pande; Tom Maniatis; Andrea R Hasenstaub; Michael P Stryker; Arturo Alvarez-Buylla
Journal:  Elife       Date:  2020-07-07       Impact factor: 8.140

8.  Structure and Sequence Analyses of Clustered Protocadherins Reveal Antiparallel Interactions that Mediate Homophilic Specificity.

Authors:  John M Nicoludis; Sze-Yi Lau; Charlotta P I Schärfe; Debora S Marks; Wilhelm A Weihofen; Rachelle Gaudet
Journal:  Structure       Date:  2015-10-15       Impact factor: 5.006

9.  The γ-Protocadherins Regulate the Survival of GABAergic Interneurons during Developmental Cell Death.

Authors:  Candace H Carriere; Wendy Xueyi Wang; Anson D Sing; Adam Fekete; Brian E Jones; Yohan Yee; Jacob Ellegood; Harinad Maganti; Lola Awofala; Julie Marocha; Amar Aziz; Lu-Yang Wang; Jason P Lerch; Julie L Lefebvre
Journal:  J Neurosci       Date:  2020-10-15       Impact factor: 6.167

Review 10.  Principles of interneuron development learned from Renshaw cells and the motoneuron recurrent inhibitory circuit.

Authors:  Francisco J Alvarez; Ana Benito-Gonzalez; Valerie C Siembab
Journal:  Ann N Y Acad Sci       Date:  2013-03       Impact factor: 5.691

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