Literature DB >> 23900538

Clustered protocadherins.

Weisheng V Chen1, Tom Maniatis.   

Abstract

The majority of vertebrate protocadherin (Pcdh) genes are clustered in a single genomic locus, and this remarkable genomic organization is highly conserved from teleosts to humans. These clustered Pcdhs are differentially expressed in individual neurons, they engage in homophilic trans-interactions as multimers and they are required for diverse neurodevelopmental processes, including neurite self-avoidance. Here, we provide a concise overview of the molecular and cellular biology of clustered Pcdhs, highlighting how they generate single cell diversity in the vertebrate nervous system and how such diversity may be used in neural circuit assembly.

Entities:  

Keywords:  CTCF; Cohesin; Homophilic interaction; Promoter choice; Self-avoidance; Single cell diversity

Mesh:

Substances:

Year:  2013        PMID: 23900538      PMCID: PMC3737714          DOI: 10.1242/dev.090621

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  61 in total

1.  Proteolytic processing of protocadherin proteins requires endocytosis.

Authors:  Sean M Buchanan; Stefanie S Schalm; Tom Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

2.  Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.

Authors:  Shigeyuki Esumi; Naoki Kakazu; Yusuke Taguchi; Teruyoshi Hirayama; Ayako Sasaki; Takahiro Hirabayashi; Tsuyoshi Koide; Takashi Kitsukawa; Shun Hamada; Takeshi Yagi
Journal:  Nat Genet       Date:  2005-01-09       Impact factor: 38.330

3.  Protocadherin clusters and cell adhesion kinase regulate dendrite complexity through Rho GTPase.

Authors:  Lun Suo; Huinan Lu; Guoxin Ying; Mario R Capecchi; Qiang Wu
Journal:  J Mol Cell Biol       Date:  2012-06-21       Impact factor: 6.216

4.  Identification of long-range regulatory elements in the protocadherin-alpha gene cluster.

Authors:  Scott Ribich; Bosiljka Tasic; Tom Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-15       Impact factor: 11.205

5.  Phosphorylation of protocadherin proteins by the receptor tyrosine kinase Ret.

Authors:  Stefanie S Schalm; Bryan A Ballif; Sean M Buchanan; Greg R Phillips; Tom Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-25       Impact factor: 11.205

6.  CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons.

Authors:  Teruyoshi Hirayama; Etsuko Tarusawa; Yumiko Yoshimura; Niels Galjart; Takeshi Yagi
Journal:  Cell Rep       Date:  2012-07-26       Impact factor: 9.423

7.  Direct and Indirect Regulation of Spinal Cord Ia Afferent Terminal Formation by the γ-Protocadherins.

Authors:  Tuhina Prasad; Joshua A Weiner
Journal:  Front Mol Neurosci       Date:  2011-12-23       Impact factor: 5.639

8.  Protocadherins: a large family of cadherin-related molecules in central nervous system.

Authors:  K Sano; H Tanihara; R L Heimark; S Obata; M Davidson; T St John; S Taketani; S Suzuki
Journal:  EMBO J       Date:  1993-06       Impact factor: 11.598

Review 9.  Dscam-mediated cell recognition regulates neural circuit formation.

Authors:  Daisuke Hattori; S Sean Millard; Woj M Wojtowicz; S Lawrence Zipursky
Journal:  Annu Rev Cell Dev Biol       Date:  2008       Impact factor: 13.827

10.  Protocadherins mediate dendritic self-avoidance in the mammalian nervous system.

Authors:  Julie L Lefebvre; Dimitar Kostadinov; Weisheng V Chen; Tom Maniatis; Joshua R Sanes
Journal:  Nature       Date:  2012-08-23       Impact factor: 49.962

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  85 in total

1.  CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.

Authors:  Ya Guo; Quan Xu; Daniele Canzio; Jia Shou; Jinhuan Li; David U Gorkin; Inkyung Jung; Haiyang Wu; Yanan Zhai; Yuanxiao Tang; Yichao Lu; Yonghu Wu; Zhilian Jia; Wei Li; Michael Q Zhang; Bing Ren; Adrian R Krainer; Tom Maniatis; Qiang Wu
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

2.  Role of the Chromosome Architectural Factor SMCHD1 in X-Chromosome Inactivation, Gene Regulation, and Disease in Humans.

Authors:  Chen-Yu Wang; Harrison Brand; Natalie D Shaw; Michael E Talkowski; Jeannie T Lee
Journal:  Genetics       Date:  2019-08-16       Impact factor: 4.562

3.  Structural Basis of Diverse Homophilic Recognition by Clustered α- and β-Protocadherins.

Authors:  Kerry Marie Goodman; Rotem Rubinstein; Chan Aye Thu; Fabiana Bahna; Seetha Mannepalli; Göran Ahlsén; Chelsea Rittenhouse; Tom Maniatis; Barry Honig; Lawrence Shapiro
Journal:  Neuron       Date:  2016-05-05       Impact factor: 17.173

Review 4.  Nuclear signaling from cadherin adhesion complexes.

Authors:  Pierre D McCrea; Meghan T Maher; Cara J Gottardi
Journal:  Curr Top Dev Biol       Date:  2015-02-12       Impact factor: 4.897

5.  Contrasting DCIS and invasive breast cancer by subtype suggests basal-like DCIS as distinct lesions.

Authors:  Helga Bergholtz; Tonje G Lien; David M Swanson; Arnoldo Frigessi; Maria Grazia Daidone; Jörg Tost; Fredrik Wärnberg; Therese Sørlie
Journal:  NPJ Breast Cancer       Date:  2020-06-17

6.  Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates.

Authors:  Yuichiro Hara; Kazuaki Yamaguchi; Koh Onimaru; Mitsutaka Kadota; Mitsumasa Koyanagi; Sean D Keeley; Kaori Tatsumi; Kaori Tanaka; Fumio Motone; Yuka Kageyama; Ryo Nozu; Noritaka Adachi; Osamu Nishimura; Reiko Nakagawa; Chiharu Tanegashima; Itsuki Kiyatake; Rui Matsumoto; Kiyomi Murakumo; Kiyonori Nishida; Akihisa Terakita; Shigeru Kuratani; Keiichi Sato; Susumu Hyodo; Shigehiro Kuraku
Journal:  Nat Ecol Evol       Date:  2018-10-08       Impact factor: 15.460

Review 7.  Revisiting Dscam diversity: lessons from clustered protocadherins.

Authors:  Yongfeng Jin; Hao Li
Journal:  Cell Mol Life Sci       Date:  2018-10-20       Impact factor: 9.261

Review 8.  Dendritic Self-Avoidance and Morphological Development of Cerebellar Purkinje Cells.

Authors:  Kazuto Fujishima; Kelly Kawabata Galbraith; Mineko Kengaku
Journal:  Cerebellum       Date:  2018-12       Impact factor: 3.847

9.  DNA methylation associated with healthy aging of elderly twins.

Authors:  Sangkyu Kim; Jennifer Wyckoff; Anne-T Morris; Annemarie Succop; Ally Avery; Glen E Duncan; S Michal Jazwinski
Journal:  Geroscience       Date:  2018-08-22       Impact factor: 7.713

10.  Molecular logic of neuronal self-recognition through protocadherin domain interactions.

Authors:  Rotem Rubinstein; Chan Aye Thu; Kerry Marie Goodman; Holly Noelle Wolcott; Fabiana Bahna; Seetha Mannepalli; Goran Ahlsen; Maxime Chevee; Adnan Halim; Henrik Clausen; Tom Maniatis; Lawrence Shapiro; Barry Honig
Journal:  Cell       Date:  2015-10-17       Impact factor: 41.582

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