Literature DB >> 22882118

Conformation and electronic population transfer in membrane-supported self-assembled porphyrin dimers by 2D fluorescence spectroscopy.

Alejandro Perdomo-Ortiz1, Julia R Widom, Geoffrey A Lott, Alán Aspuru-Guzik, Andrew H Marcus.   

Abstract

Two-dimensional fluorescence spectroscopy (2D FS) is applied to determine the conformation and femtosecond electronic population transfer in a dimer of magnesium meso tetraphenylporphyrin. The dimers are prepared by self-assembly of the monomer within the amphiphilic regions of 1,2-distearoyl-sn-glycero-3-phosphocholine liposomes. A theoretical framework to describe 2D FS experiments is presented, and a direct comparison is made between the observables of this measurement and those of 2D electronic spectroscopy (2D ES). The sensitivity of the method to varying dimer conformation is explored. A global multivariable fitting analysis of linear and 2D FS data indicates that the dimer adopts a "bent T-shaped" conformation. Moreover, the manifold of singly excited excitons undergoes rapid electronic dephasing and downhill population transfer on the time scale of ∼95 fs. The open conformation of the dimer suggests that its self-assembly is favored by an increase in entropy of the local membrane environment.

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Year:  2012        PMID: 22882118     DOI: 10.1021/jp305916x

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  16 in total

1.  Electric Dipole Transition Moments and Solvent-Dependent Interactions of Fluorescent Boron-Nitrogen Substituted Indole Derivatives.

Authors:  Mari Saif; Julia R Widom; Senmiao Xu; Eric R Abbey; Shih-Yuan Liu; Andrew H Marcus
Journal:  J Phys Chem B       Date:  2015-06-03       Impact factor: 2.991

2.  Using Multiorder Time-Correlation Functions (TCFs) To Elucidate Biomolecular Reaction Pathways from Microsecond Single-Molecule Fluorescence Experiments.

Authors:  Carey Phelps; Brett Israels; Morgan C Marsh; Peter H von Hippel; Andrew H Marcus
Journal:  J Phys Chem B       Date:  2016-12-19       Impact factor: 2.991

3.  Ultrafast Relaxation Dynamics of Photoexcited Zinc-Porphyrin: Electronic-Vibrational Coupling.

Authors:  Baxter Abraham; Jesus Nieto-Pescador; Lars Gundlach
Journal:  J Phys Chem Lett       Date:  2016-08-03       Impact factor: 6.475

4.  Temperature-dependent conformations of exciton-coupled Cy3 dimers in double-stranded DNA.

Authors:  Loni Kringle; Nicolas P D Sawaya; Julia Widom; Carson Adams; Michael G Raymer; Alán Aspuru-Guzik; Andrew H Marcus
Journal:  J Chem Phys       Date:  2018-02-28       Impact factor: 3.488

5.  Measuring local conformations and conformational disorder of (Cy3)2 dimer labeled DNA fork junctions using absorbance, circular dichroism and two-dimensional fluorescence spectroscopy.

Authors:  Dylan Heussman; Justin Kittell; Loni Kringle; Amr Tamimi; Peter H von Hippel; Andrew H Marcus
Journal:  Faraday Discuss       Date:  2019-07-11       Impact factor: 4.008

6.  Temperature-dependent conformations of a membrane supported zinc porphyrin tweezer by 2D fluorescence spectroscopy.

Authors:  Julia R Widom; Wonbae Lee; Alejandro Perdomo-Ortiz; Dmitrij Rappoport; Tadeusz F Molinski; Alán Aspuru-Guzik; Andrew H Marcus
Journal:  J Phys Chem A       Date:  2013-03-29       Impact factor: 2.781

Review 7.  Fifty years of DNA "breathing": Reflections on old and new approaches.

Authors:  Peter H von Hippel; Neil P Johnson; Andrew H Marcus
Journal:  Biopolymers       Date:  2013-12       Impact factor: 2.505

8.  Solution conformation of 2-aminopurine (2-AP) dinucleotide determined by ultraviolet 2D fluorescence spectroscopy (UV-2D FS).

Authors:  Julia R Widom; Neil P Johnson; Peter H von Hippel; Andrew H Marcus
Journal:  New J Phys       Date:  2013-02-01       Impact factor: 3.729

9.  Temperature-dependent local conformations and conformational distributions of cyanine dimer labeled single-stranded-double-stranded DNA junctions by 2D fluorescence spectroscopy.

Authors:  Dylan Heussman; Justin Kittell; Peter H von Hippel; Andrew H Marcus
Journal:  J Chem Phys       Date:  2022-01-28       Impact factor: 4.304

10.  Electronic transition moments of 6-methyl isoxanthopterin--a fluorescent analogue of the nucleic acid base guanine.

Authors:  Julia R Widom; Dmitrij Rappoport; Alejandro Perdomo-Ortiz; Hanna Thomsen; Neil P Johnson; Peter H von Hippel; Alán Aspuru-Guzik; Andrew H Marcus
Journal:  Nucleic Acids Res       Date:  2012-11-26       Impact factor: 16.971

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