Literature DB >> 22864361

Replication origins run (ultra) deep.

David M Gilbert.   

Abstract

Mesh：

Year:  2012        PMID： 22864361     DOI： 10.1038/nsmb.2352

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN： 1545-9985            Impact factor:   15.369


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  18 in total

1.  DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding.

Authors:  Dirk Remus; Eileen L Beall; Michael R Botchan
Journal:  EMBO J       Date:  2004-02-05       Impact factor: 11.598

Review 2.  Regulation of DNA replication during development.

Authors:  Jared Nordman; Terry L Orr-Weaver
Journal:  Development       Date:  2012-02       Impact factor: 6.868

3.  New insights into replication origin characteristics in metazoans.

Authors:  Christelle Cayrou; Philippe Coulombe; Aurore Puy; Stephanie Rialle; Noam Kaplan; Eran Segal; Marcel Méchali
Journal:  Cell Cycle       Date:  2012-02-15       Impact factor: 4.534

4.  Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.

Authors:  Emilie Besnard; Amélie Babled; Laure Lapasset; Ollivier Milhavet; Hugues Parrinello; Christelle Dantec; Jean-Michel Marin; Jean-Marc Lemaitre
Journal:  Nat Struct Mol Biol       Date:  2012-07-01       Impact factor: 15.369

5.  Isolating apparently pure libraries of replication origins from complex genomes.

Authors:  Larry D Mesner; Emily L Crawford; Joyce L Hamlin
Journal:  Mol Cell       Date:  2006-03-03       Impact factor: 17.970

Review 6.  Replication initiation point mapping.

Authors:  S A Gerbi; A K Bielinsky
Journal:  Methods       Date:  1997-11       Impact factor: 3.608

Review 7.  Open sesame: activating dormant replication origins in the mouse immunoglobulin heavy chain (Igh) locus.

Authors:  James A Borowiec; Carl L Schildkraut
Journal:  Curr Opin Cell Biol       Date:  2011-05-14       Impact factor: 8.382

Review 8.  Replication timing and its emergence from stochastic processes.

Authors:  John Bechhoefer; Nicholas Rhind
Journal:  Trends Genet       Date:  2012-04-18       Impact factor: 11.639

9.  High-throughput mapping of origins of replication in human cells.

Authors:  Isabelle Lucas; Aparna Palakodeti; Yanwen Jiang; David J Young; Nan Jiang; Anthony A Fernald; Michelle M Le Beau
Journal:  EMBO Rep       Date:  2007-07-13       Impact factor: 8.807

10.  Pre-replication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone.

Authors:  Yoav Lubelsky; Takayo Sasaki; Marjorie A Kuipers; Isabelle Lucas; Michelle M Le Beau; Sandra Carignon; Michelle Debatisse; Joseph A Prinz; Jonathan H Dennis; David M Gilbert
Journal:  Nucleic Acids Res       Date:  2010-12-09       Impact factor: 16.971
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  14 in total

1.  High-resolution analysis of DNA synthesis start sites and nucleosome architecture at efficient mammalian replication origins.

Authors:  Rodrigo Lombraña; Ricardo Almeida; Isabel Revuelta; Sofia Madeira; Gonzalo Herranz; Néstor Saiz; Ugo Bastolla; María Gómez
Journal:  EMBO J       Date:  2013-08-30       Impact factor: 11.598

2.  High-resolution profiling of Drosophila replication start sites reveals a DNA shape and chromatin signature of metazoan origins.

Authors:  Federico Comoglio; Tommy Schlumpf; Virginia Schmid; Remo Rohs; Christian Beisel; Renato Paro
Journal:  Cell Rep       Date:  2015-04-23       Impact factor: 9.423

Review 3.  Replicating Large Genomes: Divide and Conquer.

Authors:  Juan Carlos Rivera-Mulia; David M Gilbert
Journal:  Mol Cell       Date:  2016-06-02       Impact factor: 17.970

4.  Developmental control of replication timing defines a new breed of chromosomal domains with a novel mechanism of chromatin unfolding.

Authors:  Shin-ichiro Takebayashi; Tyrone Ryba; David M Gilbert
Journal:  Nucleus       Date:  2012-09-28       Impact factor: 4.197

5.  The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells.

Authors:  Franck Picard; Jean-Charles Cadoret; Benjamin Audit; Alain Arneodo; Adriana Alberti; Christophe Battail; Laurent Duret; Marie-Noelle Prioleau
Journal:  PLoS Genet       Date:  2014-05-01       Impact factor: 5.917

Review 6.  Peaks cloaked in the mist: the landscape of mammalian replication origins.

Authors:  Olivier Hyrien
Journal:  J Cell Biol       Date:  2015-01-19       Impact factor: 10.539

7.  Origin replication complex binding, nucleosome depletion patterns, and a primary sequence motif can predict origins of replication in a genome with epigenetic centromeres.

Authors:  Hung-Ji Tsai; Joshua A Baller; Ivan Liachko; Amnon Koren; Laura S Burrack; Meleah A Hickman; Mathuravani A Thevandavakkam; Laura N Rusche; Judith Berman
Journal:  mBio       Date:  2014-09-02       Impact factor: 7.867

8.  The Histone Variant H3.3 Is Enriched at Drosophila Amplicon Origins but Does Not Mark Them for Activation.

Authors:  Neha P Paranjape; Brian R Calvi
Journal:  G3 (Bethesda)       Date:  2016-06-01       Impact factor: 3.154

9.  Methylation of histone H3 on lysine 79 associates with a group of replication origins and helps limit DNA replication once per cell cycle.

Authors:  Haiqing Fu; Alika K Maunakea; Melvenia M Martin; Liang Huang; Ya Zhang; Michael Ryan; RyangGuk Kim; Chii Meil Lin; Keji Zhao; Mirit I Aladjem
Journal:  PLoS Genet       Date:  2013-06-06       Impact factor: 5.917

10.  Replisome stall events have shaped the distribution of replication origins in the genomes of yeasts.

Authors:  Timothy J Newman; Mohammed A Mamun; Conrad A Nieduszynski; J Julian Blow
Journal:  Nucleic Acids Res       Date:  2013-08-19       Impact factor: 16.971
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