Literature DB >> 22859440

Extraction and structural analysis of glycosaminoglycans from formalin-fixed, paraffin-embedded tissues.

Xander M R van Wijk1, Myrtille J Vallen, Els M van de Westerlo, Arie Oosterhof, Wensi Hao, Elly M Versteeg, Julius Raben, Ronnie G Wismans, Toon F C M Smetsers, Henry B P M Dijkman, Joost Schalkwijk, Toin H van Kuppevelt.   

Abstract

Glycosaminoglycans (GAGs) are long, anionic polysaccharides involved in many basic aspects of mammalian physiology and pathology. Here we describe a method to extract GAGs from formalin-fixed, paraffin-embedded tissues and found that they are structurally comparable with GAGs extracted from frozen tissues. We employed this method to structurally characterize GAGs in tissues, including laser-dissected layers of skin and pathological specimens. This method enables the use of the archival paraffin-embedded material for detailed (structural) analysis of GAGs.

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Year:  2012        PMID: 22859440     DOI: 10.1093/glycob/cws119

Source DB:  PubMed          Journal:  Glycobiology        ISSN: 0959-6658            Impact factor:   4.313


  3 in total

1.  A common sugar-nucleotide-mediated mechanism of inhibition of (glycosamino)glycan biosynthesis, as evidenced by 6F-GalNAc (Ac3).

Authors:  Xander M van Wijk; Roger Lawrence; Victor L Thijssen; Sebastiaan A van den Broek; Ran Troost; Monique van Scherpenzeel; Natasha Naidu; Arie Oosterhof; Arjan W Griffioen; Dirk J Lefeber; Floris L van Delft; Toin H van Kuppevelt
Journal:  FASEB J       Date:  2015-04-13       Impact factor: 5.191

2.  Unlocking Cancer Glycomes from Histopathological Formalin-fixed and Paraffin-embedded (FFPE) Tissue Microdissections.

Authors:  Hannes Hinneburg; Petra Korać; Falko Schirmeister; Slavko Gasparov; Peter H Seeberger; Vlatka Zoldoš; Daniel Kolarich
Journal:  Mol Cell Proteomics       Date:  2017-01-25       Impact factor: 5.911

3.  Selective Deletion of Heparan Sulfotransferase Enzyme, Ndst1, in Donor Endothelial and Myeloid Precursor Cells Significantly Decreases Acute Allograft Rejection.

Authors:  Hao Chen; Sriram Ambadapadi; Dara Wakefield; Meeyong Bartee; Jordan R Yaron; Liqiang Zhang; Stephanie A Archer-Hartmann; Parastoo Azadi; Michelle Burgin; Chad Borges; Donghang Zheng; Kevin Ergle; Vishnu Muppala; Sufi Morshed; Kenneth Rand; William Clapp; Amanda Proudfoot; Alexandra Lucas
Journal:  Sci Rep       Date:  2018-09-07       Impact factor: 4.379

  3 in total

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