Literature DB >> 22845480

Personalized medicine and pharmacogenetic biomarkers: progress in molecular oncology testing.

Frank S Ong1, Kingshuk Das, Jay Wang, Hana Vakil, Jane Z Kuo, Wendell-Lamar B Blackwell, Stephen W Lim, Mark O Goodarzi, Kenneth E Bernstein, Jerome I Rotter, Wayne W Grody.   

Abstract

In the field of oncology, clinical molecular diagnostics and biomarker discoveries are constantly advancing as the intricate molecular mechanisms that transform a normal cell into an aberrant state in concert with the dysregulation of alternative complementary pathways are increasingly understood. Progress in biomarker technology, coupled with the companion clinical diagnostic laboratory tests, continue to advance this field, where individualized and customized treatment appropriate for each individual patient define the standard of care. Here, we discuss the current commonly used predictive pharmacogenetic biomarkers in clinical oncology molecular testing: BRAF V600E for vemurafenib in melanoma; EML4-ALK for crizotinib and EGFR for erlotinib and gefitinib in non-small-cell lung cancer; KRAS against the use of cetuximab and panitumumab in colorectal cancer; ERBB2 (HER2/neu) for trastuzumab in breast cancer; BCR-ABL for tyrosine kinase inhibitors in chronic myeloid leukemia; and PML/RARα for all-trans-retinoic acid and arsenic trioxide treatment for acute promyelocytic leukemia.

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Year:  2012        PMID: 22845480      PMCID: PMC3495985          DOI: 10.1586/erm.12.59

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  83 in total

Review 1.  Assessment of somatic k-RAS mutations as a mechanism associated with resistance to EGFR-targeted agents: a systematic review and meta-analysis of studies in advanced non-small-cell lung cancer and metastatic colorectal cancer.

Authors:  Helena Linardou; Issa J Dahabreh; Dimitra Kanaloupiti; Fotios Siannis; Dimitrios Bafaloukos; Paris Kosmidis; Christos A Papadimitriou; Samuel Murray
Journal:  Lancet Oncol       Date:  2008-09-17       Impact factor: 41.316

2.  Gefitinib or chemotherapy for non-small-cell lung cancer with mutated EGFR.

Authors:  Makoto Maemondo; Akira Inoue; Kunihiko Kobayashi; Shunichi Sugawara; Satoshi Oizumi; Hiroshi Isobe; Akihiko Gemma; Masao Harada; Hirohisa Yoshizawa; Ichiro Kinoshita; Yuka Fujita; Shoji Okinaga; Haruto Hirano; Kozo Yoshimori; Toshiyuki Harada; Takashi Ogura; Masahiro Ando; Hitoshi Miyazawa; Tomoaki Tanaka; Yasuo Saijo; Koichi Hagiwara; Satoshi Morita; Toshihiro Nukiwa
Journal:  N Engl J Med       Date:  2010-06-24       Impact factor: 91.245

3.  BRAF mutations in hairy-cell leukemia.

Authors:  Enrico Tiacci; Vladimir Trifonov; Gianluca Schiavoni; Antony Holmes; Wolfgang Kern; Maria Paola Martelli; Alessandra Pucciarini; Barbara Bigerna; Roberta Pacini; Victoria A Wells; Paolo Sportoletti; Valentina Pettirossi; Roberta Mannucci; Oliver Elliott; Arcangelo Liso; Achille Ambrosetti; Alessandro Pulsoni; Francesco Forconi; Livio Trentin; Gianpietro Semenzato; Giorgio Inghirami; Monia Capponi; Francesco Di Raimondo; Caterina Patti; Luca Arcaini; Pellegrino Musto; Stefano Pileri; Claudia Haferlach; Susanne Schnittger; Giovanni Pizzolo; Robin Foà; Laurent Farinelli; Torsten Haferlach; Laura Pasqualucci; Raul Rabadan; Brunangelo Falini
Journal:  N Engl J Med       Date:  2011-06-11       Impact factor: 91.245

Review 4.  Laboratory methods for KRAS mutation analysis.

Authors:  Steven M Anderson
Journal:  Expert Rev Mol Diagn       Date:  2011-07       Impact factor: 5.225

Review 5.  The cell cycle and cancer.

Authors:  Gareth H Williams; Kai Stoeber
Journal:  J Pathol       Date:  2011-10-28       Impact factor: 7.996

Review 6.  Gene expression profiling in breast cancer: classification, prognostication, and prediction.

Authors:  Jorge S Reis-Filho; Lajos Pusztai
Journal:  Lancet       Date:  2011-11-19       Impact factor: 79.321

7.  EML4-ALK fusion is linked to histological characteristics in a subset of lung cancers.

Authors:  Kentaro Inamura; Kengo Takeuchi; Yuki Togashi; Kimie Nomura; Hironori Ninomiya; Michiyo Okui; Yukitoshi Satoh; Sakae Okumura; Ken Nakagawa; Manabu Soda; Young Lim Choi; Toshiro Niki; Hiroyuki Mano; Yuichi Ishikawa
Journal:  J Thorac Oncol       Date:  2008-01       Impact factor: 15.609

8.  Second-line treatment of advanced non-small cell lung cancer.

Authors:  Cesare Gridelli; Andrea Ardizzoni; Fortunato Ciardiello; Nasser Hanna; John V Heymach; Francesco Perrone; Rafael Rosell; Frances A Shepherd; Nick Thatcher; Johan Vansteenkiste; Luigi De Petris; Massimo Di Maio; Filippo De Marinis
Journal:  J Thorac Oncol       Date:  2008-04       Impact factor: 15.609

Review 9.  Monitoring CML patients responding to treatment with tyrosine kinase inhibitors: review and recommendations for harmonizing current methodology for detecting BCR-ABL transcripts and kinase domain mutations and for expressing results.

Authors:  Timothy Hughes; Michael Deininger; Andreas Hochhaus; Susan Branford; Jerald Radich; Jaspal Kaeda; Michele Baccarani; Jorge Cortes; Nicholas C P Cross; Brian J Druker; Jean Gabert; David Grimwade; Rüdiger Hehlmann; Suzanne Kamel-Reid; Jeffrey H Lipton; Janina Longtine; Giovanni Martinelli; Giuseppe Saglio; Simona Soverini; Wendy Stock; John M Goldman
Journal:  Blood       Date:  2006-03-07       Impact factor: 22.113

Review 10.  Targeted cancer therapy.

Authors:  Charles Sawyers
Journal:  Nature       Date:  2004-11-18       Impact factor: 49.962

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  22 in total

1.  Integrating genetic and genomic information into effective cancer care in diverse populations.

Authors:  L Fashoyin-Aje; K Sanghavi; K Bjornard; J Bodurtha
Journal:  Ann Oncol       Date:  2013-10       Impact factor: 32.976

2.  The mathematical limits of genetic prediction for complex chronic disease.

Authors:  Katherine M Keyes; George Davey Smith; Karestan C Koenen; Sandro Galea
Journal:  J Epidemiol Community Health       Date:  2015-02-03       Impact factor: 3.710

Review 3.  Libraries and genomics: providing support to health care providers and consumers.

Authors:  Karen E Gutzman; Marcy L Vana; Kristi L Holmes
Journal:  Mo Med       Date:  2014 Sep-Oct

4.  The Association between Cytokines and 365-Day Readmission or Mortality in Adult Cardiac Surgery.

Authors:  Allen D Everett; Shama S Alam; Sherry L Owens; Devin M Parker; Christine Goodrich; Donald S Likosky; Heather Thiessen-Philbrook; Moritz Wyler von Ballmoos; Kevin Lobdell; Todd A MacKenzie; Jeffrey Jacobs; Chirag R Parikh; Anthony W DiScipio; David J Malenka; Jeremiah R Brown
Journal:  J Extra Corpor Technol       Date:  2019-12

Review 5.  Validation and clinical utility of prostate cancer biomarkers.

Authors:  Howard I Scher; Michael J Morris; Steven Larson; Glenn Heller
Journal:  Nat Rev Clin Oncol       Date:  2013-03-05       Impact factor: 66.675

6.  Preappointment testing for BRAF/KIT mutation in advanced melanoma: a model in molecular data delivery for individualized medicine.

Authors:  Taofic Mounajjed; Char L Brown; Therese K Stern; Annette M Bjorheim; Andrew J Bridgeman; Kandelaria M Rumilla; Robert R McWilliams; Thomas J Flotte
Journal:  Hum Pathol       Date:  2014-07-30       Impact factor: 3.466

7.  Identifying predictive markers for personalized treatment selection.

Authors:  Yuanyuan Shen; Tianxi Cai
Journal:  Biometrics       Date:  2016-03-21       Impact factor: 2.571

Review 8.  Cancer nanotechnology: the impact of passive and active targeting in the era of modern cancer biology.

Authors:  Nicolas Bertrand; Jun Wu; Xiaoyang Xu; Nazila Kamaly; Omid C Farokhzad
Journal:  Adv Drug Deliv Rev       Date:  2013-11-22       Impact factor: 15.470

9.  Adjuvant Weekly Girentuximab Following Nephrectomy for High-Risk Renal Cell Carcinoma: The ARISER Randomized Clinical Trial.

Authors:  Karim Chamie; Nicholas M Donin; Pia Klöpfer; Paul Bevan; Barbara Fall; Olaf Wilhelm; Stephan Störkel; Jonathan Said; Michael Gambla; Robert E Hawkins; Gustavo Jankilevich; Anil Kapoor; Evgeny Kopyltsov; Michael Staehler; Kimmo Taari; Alberto J A Wainstein; Allan J Pantuck; Arie S Belldegrun
Journal:  JAMA Oncol       Date:  2017-07-01       Impact factor: 31.777

10.  A novel approach to detect KRAS/BRAF mutation for colon cancer: Highly sensitive simultaneous detection of mutations and simple pre-treatment without DNA extraction.

Authors:  Shun-Ichi Suzuki; Satoshi Matsusaka; Mitsuharu Hirai; Harumi Shibata; Koichi Takagi; Nobuyuki Mizunuma; Kiyohiko Hatake
Journal:  Int J Oncol       Date:  2015-04-30       Impact factor: 5.650

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