Literature DB >> 22843664

A synthetic approach reveals extensive tunability of auxin signaling.

Kyle A Havens1, Jessica M Guseman, Seunghee S Jang, Edith Pierre-Jerome, Nick Bolten, Eric Klavins, Jennifer L Nemhauser.   

Abstract

Explaining how the small molecule auxin triggers diverse yet specific responses is a long-standing challenge in plant biology. An essential step in auxin response is the degradation of Auxin/Indole-3-Acetic Acid (Aux/IAA, referred to hereafter as IAA) repressor proteins through interaction with auxin receptors. To systematically characterize diversity in degradation behaviors among IAA|receptor pairs, we engineered auxin-induced degradation of plant IAA proteins in yeast (Saccharomyces cerevisiae). We found that IAA degradation dynamics vary widely, depending on which receptor is present, and are not encoded solely by the degron-containing domain II. To facilitate this and future studies, we identified a mathematical model able to quantitatively describe IAA degradation behavior in a single parameter. Together, our results demonstrate the remarkable tunability conferred by specific configurations of the auxin response pathway.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22843664      PMCID: PMC3440190          DOI: 10.1104/pp.112.202184

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  26 in total

1.  Regulation of phyllotaxis by polar auxin transport.

Authors:  Didier Reinhardt; Eva-Rachele Pesce; Pia Stieger; Therese Mandel; Kurt Baltensperger; Malcolm Bennett; Jan Traas; Jirí Friml; Cris Kuhlemeier
Journal:  Nature       Date:  2003-11-20       Impact factor: 49.962

Review 2.  Context, specificity, and self-organization in auxin response.

Authors:  Marta Del Bianco; Stefan Kepinski
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

3.  The F-box protein TIR1 is an auxin receptor.

Authors:  Nihal Dharmasiri; Sunethra Dharmasiri; Mark Estelle
Journal:  Nature       Date:  2005-05-26       Impact factor: 49.962

4.  Mechanism of auxin perception by the TIR1 ubiquitin ligase.

Authors:  Xu Tan; Luz Irina A Calderon-Villalobos; Michal Sharon; Changxue Zheng; Carol V Robinson; Mark Estelle; Ning Zheng
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

Review 5.  Do trees grow on money? Auxin as the currency of the cellular economy.

Authors:  Jodi L Stewart; Jennifer L Nemhauser
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02       Impact factor: 10.005

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method.

Authors:  R Daniel Gietz; Robin A Woods
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

8.  Distinguishing possible mechanisms for auxin-mediated developmental control in Arabidopsis: models with two Aux/IAA and ARF proteins, and two target gene-sets.

Authors:  L J Bridge; G R Mirams; M L Kieffer; J R King; S Kepinski
Journal:  Math Biosci       Date:  2011-10-31       Impact factor: 2.144

9.  The Arabidopsis F-box protein TIR1 is an auxin receptor.

Authors:  Stefan Kepinski; Ottoline Leyser
Journal:  Nature       Date:  2005-05-26       Impact factor: 49.962

10.  The auxin signalling network translates dynamic input into robust patterning at the shoot apex.

Authors:  Teva Vernoux; Géraldine Brunoud; Etienne Farcot; Valérie Morin; Hilde Van den Daele; Jonathan Legrand; Marina Oliva; Pradeep Das; Antoine Larrieu; Darren Wells; Yann Guédon; Lynne Armitage; Franck Picard; Soazig Guyomarc'h; Coralie Cellier; Geraint Parry; Rachil Koumproglou; John H Doonan; Mark Estelle; Christophe Godin; Stefan Kepinski; Malcolm Bennett; Lieven De Veylder; Jan Traas
Journal:  Mol Syst Biol       Date:  2011-07-05       Impact factor: 11.429

View more
  56 in total

Review 1.  SCFTIR1/AFB-based auxin perception: mechanism and role in plant growth and development.

Authors:  Mohammad Salehin; Rammyani Bagchi; Mark Estelle
Journal:  Plant Cell       Date:  2015-01-20       Impact factor: 11.277

2.  Auxin-induced degradation dynamics set the pace for lateral root development.

Authors:  Jessica M Guseman; Antje Hellmuth; Amy Lanctot; Tamar P Feldman; Britney L Moss; Eric Klavins; Luz Irina A Calderón Villalobos; Jennifer L Nemhauser
Journal:  Development       Date:  2015-01-29       Impact factor: 6.868

Review 3.  Plant synthetic biology for molecular engineering of signalling and development.

Authors:  Jennifer L Nemhauser; Keiko U Torii
Journal:  Nat Plants       Date:  2016-03-02       Impact factor: 15.793

4.  Auxin perception: in the IAA of the beholder.

Authors:  Bastiaan O R Bargmann; Mark Estelle
Journal:  Physiol Plant       Date:  2014-05       Impact factor: 4.500

Review 5.  Mechanisms of auxin signaling.

Authors:  Meirav Lavy; Mark Estelle
Journal:  Development       Date:  2016-09-15       Impact factor: 6.868

Review 6.  Genetic dissection of the auxin response network.

Authors:  Alon Israeli; Jason W Reed; Naomi Ori
Journal:  Nat Plants       Date:  2020-08-17       Impact factor: 15.793

7.  Insights into the Evolution and Function of Auxin Signaling F-Box Proteins in Arabidopsis thaliana Through Synthetic Analysis of Natural Variants.

Authors:  R Clay Wright; Mollye L Zahler; Stacey R Gerben; Jennifer L Nemhauser
Journal:  Genetics       Date:  2017-07-31       Impact factor: 4.562

8.  Auxin signaling modules regulate maize inflorescence architecture.

Authors:  Mary Galli; Qiujie Liu; Britney L Moss; Simon Malcomber; Wei Li; Craig Gaines; Silvia Federici; Jessica Roshkovan; Robert Meeley; Jennifer L Nemhauser; Andrea Gallavotti
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-13       Impact factor: 11.205

9.  Mutations in the TIR1 auxin receptor that increase affinity for auxin/indole-3-acetic acid proteins result in auxin hypersensitivity.

Authors:  Hong Yu; Britney L Moss; Seunghee S Jang; Michael Prigge; Eric Klavins; Jennifer L Nemhauser; Mark Estelle
Journal:  Plant Physiol       Date:  2013-03-28       Impact factor: 8.340

10.  Auxin 2012: a rich mea ho'oulu.

Authors:  Lucia C Strader; Jennifer L Nemhauser
Journal:  Development       Date:  2013-03       Impact factor: 6.868

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.