Literature DB >> 22843584

Complete genome sequence of the hyperthermophilic cellulolytic crenarchaeon "Thermogladius cellulolyticus" 1633.

Andrey V Mardanov1, Tatiana V Kochetkova, Alexey V Beletsky, Elizaveta A Bonch-Osmolovskaya, Nikolai V Ravin, Konstantin G Skryabin.   

Abstract

Strain 1633, a novel member of the genus Thermogladius, isolated from a freshwater hot spring, is an anaerobic hyperthermophilic crenarchaeon capable of fermenting proteinaceous and cellulose substrates. The complete genome sequence reveals genes for protein and carbohydrate-active enzymes, the Embden-Meyerhof pathway for glucose metabolism, cytoplasmic NADP-dependent hydrogenase, and several energy-coupling membrane-bound oxidoreductases.

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Year:  2012        PMID： 22843584      PMCID： PMC3416258          DOI： 10.1128/JB.00894-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  8 in total

Review 1.  The unique features of glycolytic pathways in Archaea.

Authors:  Corné H Verhees; Servé W M Kengen; Judith E Tuininga; Gerrit J Schut; Michael W W Adams; Willem M De Vos; John Van Der Oost
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

2.  Thermogladius shockii gen. nov., sp. nov., a hyperthermophilic crenarchaeote from Yellowstone National Park, USA.

Authors:  Magdalena R Osburn; Jan P Amend
Journal:  Arch Microbiol       Date:  2010-10-27       Impact factor: 2.552

3.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

4.  Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis.

Authors:  Nikolai V Ravin; Andrey V Mardanov; Alexey V Beletsky; Ilya V Kublanov; Tatiana V Kolganova; Alexander V Lebedinsky; Nikolai A Chernyh; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin
Journal:  J Bacteriol       Date:  2008-12-29       Impact factor: 3.490

Review 5.  Occurrence, classification, and biological function of hydrogenases: an overview.

Authors:  Paulette M Vignais; Bernard Billoud
Journal:  Chem Rev       Date:  2007-10       Impact factor: 60.622

6.  A simple energy-conserving system: proton reduction coupled to proton translocation.

Authors:  Rajat Sapra; Karine Bagramyan; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-05       Impact factor: 11.205

7.  Complete genome sequence of Thermosphaera aggregans type strain (M11TL).

Authors:  Stefan Spring; Reinhard Rachel; Alla Lapidus; Karen Davenport; Hope Tice; Alex Copeland; Jan-Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia C Jeffries; Thomas Brettin; John C Detter; Roxanne Tapia; Cliff Han; Thomas Heimerl; Fabian Weikl; Evelyne Brambilla; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-06-15

8.  AutoFACT: an automatic functional annotation and classification tool.

Authors:  Liisa B Koski; Michael W Gray; B Franz Lang; Gertraud Burger
Journal:  BMC Bioinformatics       Date:  2005-06-16       Impact factor: 3.169
  8 in total
  2 in total

1.  Analysis of the complete genome of Fervidococcus fontis confirms the distinct phylogenetic position of the order Fervidicoccales and suggests its environmental function.

Authors:  Alexander V Lebedinsky; Andrey V Mardanov; Ilya V Kublanov; Vadim M Gumerov; Alexey V Beletsky; Anna A Perevalova; Salima Kh Bidzhieva; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin; Nikolai V Ravin
Journal:  Extremophiles       Date:  2013-12-24       Impact factor: 2.395

2.  Tailoring Hydrothermal Vent Biodiversity Toward Improved Biodiscovery Using a Novel in situ Enrichment Strategy.

Authors:  Runar Stokke; Eoghan P Reeves; Håkon Dahle; Anita-Elin Fedøy; Thomas Viflot; Solveig Lie Onstad; Francesca Vulcano; Rolf B Pedersen; Vincent G H Eijsink; Ida H Steen
Journal:  Front Microbiol       Date:  2020-02-21       Impact factor: 5.640
  2 in total

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