Literature DB >> 22842708

Biological network modeling identifies IPCS in Leishmania as a therapeutic target.

Vineetha Mandlik1, Sonali Shinde, Ashish Chaudhary, Shailza Singh.   

Abstract

Systems biology aims to develop mathematical models of biological systems by integrating experimental and theoretical techniques by leveraging on the genome wide data to unravel the complexity of gene regulation. Despite the availability of effective chemotherapy, leishmaniasis continues to be one of the major parasitic infections that affect the human population worldwide. Currently, little is known of the structural biology of the parasites that are responsible for the disease and few attempts have been made to develop second generation drugs, which may become essential if multi-drug resistance arises. These facts make the discovery of novel drug targets a priority. Multiscale modeling and simulation techniques permit us to study the spatial and temporal properties of large systems to be simulated using atomic-detail structures. The estimation of kinetic parameters for the mathematical modeling provides a basis for iterative manipulation of biochemical pathways. In this paper, emphasis is laid on the discrete regulation of gene or protein expression as modeling can be done based on pure qualitative knowledge about interaction between genes or proteins that is widely available from the existing experimental methodologies. IPC synthase is one of them, believed to play a pivotal role in the pathogenesis of Leishmania sp. and resides in an acidic macrophage phagolysosome, defining a new class of eukaryotic sphingolipid synthases. This work will facilitate the rational development of inhibitors against a protozoan enzyme with no mammalian equivalent, leading to the prospect of anti-protozoal compounds with minimal toxic side effects. Henceforth, it can be said that exploiting the interactome for novel human drug targets could provide new therapeutic avenues towards the treatment of infectious diseases, which could ameliorate the growing clinical challenge of drug-resistant infections.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22842708     DOI: 10.1039/c2ib20037f

Source DB:  PubMed          Journal:  Integr Biol (Camb)        ISSN: 1757-9694            Impact factor:   2.192


  8 in total

1.  Synthetic circuit of inositol phosphorylceramide synthase in Leishmania : a chemical biology approach.

Authors:  Vineetha Mandlik; Dixita Limbachiya; Sonali Shinde; Milsee Mol; Shailza Singh
Journal:  J Chem Biol       Date:  2013-01-03

Review 2.  Emerging therapeutic targets for treatment of leishmaniasis.

Authors:  Shyam Sundar; Bhawana Singh
Journal:  Expert Opin Ther Targets       Date:  2018-05-09       Impact factor: 6.902

3.  Molecular evolution of the enzymes involved in the sphingolipid metabolism of Leishmania: selection pressure in relation to functional divergence and conservation.

Authors:  Vineetha Mandlik; Sonali Shinde; Shailza Singh
Journal:  BMC Evol Biol       Date:  2014-06-21       Impact factor: 3.260

4.  Molecular docking and molecular dynamics simulation study of inositol phosphorylceramide synthase - inhibitor complex in leishmaniasis: Insight into the structure based drug design.

Authors:  Vineetha Mandlik; Shailza Singh
Journal:  F1000Res       Date:  2016-07-08

5.  Identifying inhibitors of the Leishmania inositol phosphorylceramide synthase with antiprotozoal activity using a yeast-based assay and ultra-high throughput screening platform.

Authors:  Jennifer L Norcliffe; John G Mina; Emilio Alvarez; Juan Cantizani; Francisco de Dios-Anton; Gonzalo Colmenarejo; Silva Gonzalez-Del Valle; Maria Marco; José M Fiandor; Julio J Martin; Patrick G Steel; Paul W Denny
Journal:  Sci Rep       Date:  2018-03-02       Impact factor: 4.379

Review 6.  System pharmacogenomics application in infectious diseases.

Authors:  Vineetha Mandlik; Ritika Kabra; Shailza Singh
Journal:  Brief Funct Genomics       Date:  2017-09-01       Impact factor: 4.241

7.  A stochastic chemical dynamic approach to correlate autoimmunity and optimal vitamin-D range.

Authors:  Susmita Roy; Krishna Shrinivas; Biman Bagchi
Journal:  PLoS One       Date:  2014-06-27       Impact factor: 3.240

8.  In silico Metabolic Pathway Analysis Identifying Target Against Leishmaniasis - A Kinetic Modeling Approach.

Authors:  Nikita Bora; Anupam Nath Jha
Journal:  Front Genet       Date:  2020-03-06       Impact factor: 4.599

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.