Literature DB >> 22830250

[Reconstruction of associative protein networks connected with processes of sodium exchange' regulation and sodium deposition in healthy volunteers by urine proteome analysis].

I M Larina, N A Kolchanov, I V Dobrokhotov, V A Ivanisenko, P S Demenkov, E S Tiĭs, O A Valeeva, L Kh Pastushkova, E N Nikolaev.   

Abstract

The study was conducted during the experiment with 105-day isolation in experimental complex. In the present investigation we collected urine samples from 6 healthy volunteers. The physical activity, diurnal rhythm, temperature parameters and level of oxygen and carbon dioxide were controlled during the experiment. According to the program, food intake (electrolytes, water, calories, fat, carbohydrates, protein, vitamins, etc.) on each stage of experiment was normalized. All samples were analyzed using mass spectrometer of an ionic cyclotron resonance with transformation of Fure LTQ FT MS (Thermo) on the basis of the AMT-tags (accurate mass and time tags) approach. Among more than 20 000 we found out 690 proteotypical proteins and we identified about 600 urine proteins. For physiological interpretation of the proteome data we used computer systems ANDCell and ANDVisio. Clustering of proteins and application of these systems revealed proteins that are most closely associated with the regime of sodium intake, as well as build the network of their interactions.

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Year:  2012        PMID: 22830250

Source DB:  PubMed          Journal:  Fiziol Cheloveka        ISSN: 0131-1646


  4 in total

1.  Molecular association of pathogenetic contributors to pre-eclampsia (pre-eclampsia associome).

Authors:  Andrey S Glotov; Evgeny S Tiys; Elena S Vashukova; Vladimir S Pakin; Pavel S Demenkov; Olga V Saik; Timofey V Ivanisenko; Olga N Arzhanova; Elena V Mozgovaya; Marina S Zainulina; Nikolay A Kolchanov; Vladislav S Baranov; Vladimir A Ivanisenko
Journal:  BMC Syst Biol       Date:  2015-04-15

2.  Time-course human urine proteomics in space-flight simulation experiments.

Authors:  Hans Binder; Henry Wirth; Arsen Arakelyan; Kathrin Lembcke; Evgeny S Tiys; Vladimir A Ivanisenko; Nikolay A Kolchanov; Alexey Kononikhin; Igor Popov; Evgeny N Nikolaev; Lyudmila Pastushkova; Irina M Larina
Journal:  BMC Genomics       Date:  2014-12-19       Impact factor: 3.969

3.  The Proteome of a Healthy Human during Physical Activity under Extreme Conditions.

Authors:  I M Larina; V A Ivanisenko; E N Nikolaev; A I Grigorev
Journal:  Acta Naturae       Date:  2014-07       Impact factor: 1.845

4.  FunGeneNet: a web tool to estimate enrichment of functional interactions in experimental gene sets.

Authors:  Evgeny S Tiys; Timofey V Ivanisenko; Pavel S Demenkov; Vladimir A Ivanisenko
Journal:  BMC Genomics       Date:  2018-02-09       Impact factor: 3.969

  4 in total

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