Literature DB >> 25879409

Molecular association of pathogenetic contributors to pre-eclampsia (pre-eclampsia associome).

Andrey S Glotov, Evgeny S Tiys, Elena S Vashukova, Vladimir S Pakin, Pavel S Demenkov, Olga V Saik, Timofey V Ivanisenko, Olga N Arzhanova, Elena V Mozgovaya, Marina S Zainulina, Nikolay A Kolchanov, Vladislav S Baranov, Vladimir A Ivanisenko.   

Abstract

BACKGROUND: Pre-eclampsia is the most common complication occurring during pregnancy. In the majority of cases, it is concurrent with other pathologies in a comorbid manner (frequent co-occurrences in patients), such as diabetes mellitus, gestational diabetes and obesity. Providing bronchial asthma, pulmonary tuberculosis, certain neurodegenerative diseases and cancers as examples, we have shown previously that pairs of inversely comorbid pathologies (rare co-occurrences in patients) are more closely related to each other at the molecular genetic level compared with randomly generated pairs of diseases. Data in the literature concerning the causes of pre-eclampsia are abundant. However, the key mechanisms triggering this disease that are initiated by other pathological processes are thus far unknown. The aim of this work was to analyse the characteristic features of genetic networks that describe interactions between comorbid diseases, using pre-eclampsia as a case in point.
RESULTS: The use of ANDSystem, Pathway Studio and STRING computer tools based on text-mining and database-mining approaches allowed us to reconstruct associative networks, representing molecular genetic interactions between genes, associated concurrently with comorbid disease pairs, including pre-eclampsia, diabetes mellitus, gestational diabetes and obesity. It was found that these associative networks statistically differed in the number of genes and interactions between them from those built for randomly chosen pairs of diseases. The associative network connecting all four diseases was composed of 16 genes (PLAT, ADIPOQ, ADRB3, LEPR, HP, TGFB1, TNFA, INS, CRP, CSRP1, IGFBP1, MBL2, ACE, ESR1, SHBG, ADA). Such an analysis allowed us to reveal differential gene risk factors for these diseases, and to propose certain, most probable, theoretical mechanisms of pre-eclampsia development in pregnant women. The mechanisms may include the following pathways: [TGFB1 or TNFA]-[IL1B]-[pre-eclampsia]; [TNFA or INS]-[NOS3]-[pre-eclampsia]; [INS]-[HSPA4 or CLU]-[pre-eclampsia]; [ACE]-[MTHFR]-[pre-eclampsia].
CONCLUSIONS: For pre-eclampsia, diabetes mellitus, gestational diabetes and obesity, we showed that the size and connectivity of the associative molecular genetic networks, which describe interactions between comorbid diseases, statistically exceeded the size and connectivity of those built for randomly chosen pairs of diseases. Recently, we have shown a similar result for inversely comorbid diseases. This suggests that comorbid and inversely comorbid diseases have common features concerning structural organization of associative molecular genetic networks.

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Year:  2015        PMID: 25879409      PMCID: PMC4407242          DOI: 10.1186/1752-0509-9-S2-S4

Source DB:  PubMed          Journal:  BMC Syst Biol        ISSN: 1752-0509


  52 in total

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2.  Functional divergence of Helicobacter pylori related to early gastric cancer.

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3.  Insights into pathophysiology of dystropy through the analysis of gene networks: an example of bronchial asthma and tuberculosis.

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Authors:  Sven Schneider; Nele Freerksen; Silke Röhrig; Birgit Hoeft; Holger Maul
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Review 8.  Pre-eclampsia part 1: current understanding of its pathophysiology.

Authors:  Tinnakorn Chaiworapongsa; Piya Chaemsaithong; Lami Yeo; Roberto Romero
Journal:  Nat Rev Nephrol       Date:  2014-07-08       Impact factor: 28.314

9.  Endothelial NO synthase genotype and risk of preeclampsia: a multicenter case-control study.

Authors:  Norma C Serrano; Juan P Casas; Luis A Díaz; Carolina Páez; Clara M Mesa; Rodrigo Cifuentes; Alvaro Monterrosa; Alejandro Bautista; Emma Hawe; Aroon D Hingorani; Patrick Vallance; Patricio López-Jaramillo
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10.  Quantitative biomedical annotation using medical subject heading over-representation profiles (MeSHOPs).

Authors:  Warren A Cheung; B F Francis Ouellette; Wyeth W Wasserman
Journal:  BMC Bioinformatics       Date:  2012-09-27       Impact factor: 3.169

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  12 in total

1.  A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression.

Authors:  Vladimir A Ivanisenko; Pavel S Demenkov; Timofey V Ivanisenko; Elena L Mishchenko; Olga V Saik
Journal:  BMC Bioinformatics       Date:  2019-02-05       Impact factor: 3.169

2.  Prioritization of genes involved in endothelial cell apoptosis by their implication in lymphedema using an analysis of associative gene networks with ANDSystem.

Authors:  Olga V Saik; Vadim V Nimaev; Dilovarkhuja B Usmonov; Pavel S Demenkov; Timofey V Ivanisenko; Inna N Lavrik; Vladimir A Ivanisenko
Journal:  BMC Med Genomics       Date:  2019-03-13       Impact factor: 3.063

3.  Prevention of intrauterine fetal growth restriction by administrating C1q/TNF-related protein 6, a specific inhibitor of the alternative complement pathway.

Authors:  Mayu Kurokawa; Ai Takeshita; Shu Hashimoto; Masayasu Koyama; Yoshiharu Morimoto; Daisuke Tachibana
Journal:  J Assist Reprod Genet       Date:  2022-07-30       Impact factor: 3.357

4.  Preconditioning in the Rhesus Macaque Induces a Proteomic Signature Following Cerebral Ischemia that Is Associated with Neuroprotection.

Authors:  Susan L Stevens; Tao Liu; Frances Rena Bahjat; Vladislav A Petyuk; Athena A Schepmoes; Ryan L Sontag; Marina A Gritsenko; Chaochao Wu; Sheng Wang; Anil K Shukla; Jon M Jacobs; Richard D Smith; Karin D Rodland; G Alexander West; Steven G Kohama; Christine Glynn; Mary P Stenzel-Poore
Journal:  Transl Stroke Res       Date:  2018-10-19       Impact factor: 6.829

5.  Prediction of tissue-specific effects of gene knockout on apoptosis in different anatomical structures of human brain.

Authors:  Evgeny D Petrovskiy; Olga V Saik; Evgeny S Tiys; Inna N Lavrik; Nikolay A Kolchanov; Vladimir A Ivanisenko
Journal:  BMC Genomics       Date:  2015-12-16       Impact factor: 3.969

6.  Placental microRNA expression in pregnancies complicated by superimposed pre‑eclampsia on chronic hypertension.

Authors:  Elena S Vashukova; Andrey S Glotov; Pavel V Fedotov; Olga A Efimova; Vladimir S Pakin; Elena V Mozgovaya; Anna A Pendina; Andrei V Tikhonov; Alla S Koltsova; Vladislav S Baranov
Journal:  Mol Med Rep       Date:  2016-05-13       Impact factor: 2.952

7.  FunGeneNet: a web tool to estimate enrichment of functional interactions in experimental gene sets.

Authors:  Evgeny S Tiys; Timofey V Ivanisenko; Pavel S Demenkov; Vladimir A Ivanisenko
Journal:  BMC Genomics       Date:  2018-02-09       Impact factor: 3.969

8.  Risk factors for preeclampsia in infertile Chinese women with polycystic ovary syndrome: A prospective cohort study.

Authors:  Hexia Xia; Ruixiu Zhang; Xiaoli Sun; Lu Wang; Wei Zhang
Journal:  J Clin Hypertens (Greenwich)       Date:  2016-12-27       Impact factor: 3.738

9.  Maternal Periodontal Disease: A Possible Risk Factor for Adverse Pregnancy Outcomes in the Qassim Region of Saudi Arabia.

Authors:  Abdulwahab Alrumayh; Fahad Alfuhaid; Arshad Jamal Sayed; Sabahat Ullah Khan Tareen; Ibtehal Alrumayh; Mohammed Ali Habibullah
Journal:  J Pharm Bioallied Sci       Date:  2021-11-10

10.  Bioinformatic Reconstruction and Analysis of Gene Networks Related to Glucose Variability in Diabetes and Its Complications.

Authors:  Olga V Saik; Vadim V Klimontov
Journal:  Int J Mol Sci       Date:  2020-11-18       Impact factor: 5.923

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