Literature DB >> 22813741

Structure of a peptidoglycan amidase effector targeted to Gram-negative bacteria by the type VI secretion system.

Seemay Chou1, Nhat Khai Bui, Alistair B Russell, Katrina W Lexa, Taylor E Gardiner, Michele LeRoux, Waldemar Vollmer, Joseph D Mougous.   

Abstract

The target range of a bacterial secretion system can be defined by effector substrate specificity or by the efficacy of effector delivery. Here, we report the crystal structure of Tse1, a type VI secretion (T6S) bacteriolytic amidase effector from Pseudomonas aeruginosa. Consistent with its role as a toxin, Tse1 has a more accessible active site than related housekeeping enzymes. The activity of Tse1 against isolated peptidoglycan shows its capacity to act broadly against Gram-negative bacteria and even certain Gram-positive species. Studies with intact cells indicate that Gram-positive bacteria can remain vulnerable to Tse1 despite cell wall modifications. However, interbacterial competition studies demonstrate that Tse1-dependent lysis is restricted to Gram-negative targets. We propose that the previously observed specificity for T6S against Gram-negative bacteria is a consequence of high local effector concentration achieved by T6S-dependent targeting to its site of action rather than inherent effector substrate specificity.
Copyright © 2012 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22813741      PMCID: PMC3401384          DOI: 10.1016/j.celrep.2012.05.016

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  47 in total

1.  MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes.

Authors:  Ian W Davis; Laura Weston Murray; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  Glide: a new approach for rapid, accurate docking and scoring. 2. Enrichment factors in database screening.

Authors:  Thomas A Halgren; Robert B Murphy; Richard A Friesner; Hege S Beard; Leah L Frye; W Thomas Pollard; Jay L Banks
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

4.  Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.

Authors:  Richard A Friesner; Jay L Banks; Robert B Murphy; Thomas A Halgren; Jasna J Klicic; Daniel T Mainz; Matthew P Repasky; Eric H Knoll; Mee Shelley; Jason K Perry; David E Shaw; Perry Francis; Peter S Shenkin
Journal:  J Med Chem       Date:  2004-03-25       Impact factor: 7.446

5.  Suite of three protein crystallography beamlines with single superconducting bend magnet as the source.

Authors:  Alastair A MacDowell; Rich S Celestre; Malcolm Howells; Wayne McKinney; James Krupnick; Daniella Cambie; Edward E Domning; Robert M Duarte; Nicholas Kelez; David W Plate; Carl W Cork; Thomas N Earnest; Jeffery Dickert; George Meigs; Corie Ralston; James M Holton; Tom Alber; James M Berger; David A Agard; Howard A Padmore
Journal:  J Synchrotron Radiat       Date:  2004-10-22       Impact factor: 2.616

6.  A widespread bacterial type VI secretion effector superfamily identified using a heuristic approach.

Authors:  Alistair B Russell; Pragya Singh; Mitchell Brittnacher; Nhat Khai Bui; Rachel D Hood; Mike A Carl; Danielle M Agnello; Sandra Schwarz; David R Goodlett; Waldemar Vollmer; Joseph D Mougous
Journal:  Cell Host Microbe       Date:  2012-05-17       Impact factor: 21.023

7.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

8.  Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.

Authors:  C K Stover; X Q Pham; A L Erwin; S D Mizoguchi; P Warrener; M J Hickey; F S Brinkman; W O Hufnagle; D J Kowalik; M Lagrou; R L Garber; L Goltry; E Tolentino; S Westbrock-Wadman; Y Yuan; L L Brody; S N Coulter; K R Folger; A Kas; K Larbig; R Lim; K Smith; D Spencer; G K Wong; Z Wu; I T Paulsen; J Reizer; M H Saier; R E Hancock; S Lory; M V Olson
Journal:  Nature       Date:  2000-08-31       Impact factor: 49.962

9.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

10.  Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes.

Authors:  Vivek Anantharaman; L Aravind
Journal:  Genome Biol       Date:  2003-02-03       Impact factor: 13.583

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  44 in total

1.  Structural Insights on the bacteriolytic and self-protection mechanism of muramidase effector Tse3 in Pseudomonas aeruginosa.

Authors:  Lianbo Li; Weili Zhang; Qisong Liu; Yu Gao; Ying Gao; Yun Wang; David Zhigang Wang; Zigang Li; Tao Wang
Journal:  J Biol Chem       Date:  2013-09-11       Impact factor: 5.157

2.  Identification, structure, and function of a novel type VI secretion peptidoglycan glycoside hydrolase effector-immunity pair.

Authors:  John C Whitney; Seemay Chou; Alistair B Russell; Jacob Biboy; Taylor E Gardiner; Michael A Ferrin; Mitchell Brittnacher; Waldemar Vollmer; Joseph D Mougous
Journal:  J Biol Chem       Date:  2013-07-22       Impact factor: 5.157

3.  VgrG-5 is a Burkholderia type VI secretion system-exported protein required for multinucleated giant cell formation and virulence.

Authors:  Sandra Schwarz; Pragya Singh; Johanna D Robertson; Michele LeRoux; Shawn J Skerrett; David R Goodlett; T Eoin West; Joseph D Mougous
Journal:  Infect Immun       Date:  2014-01-22       Impact factor: 3.441

4.  Quantitative single-cell characterization of bacterial interactions reveals type VI secretion is a double-edged sword.

Authors:  Michele LeRoux; Justin A De Leon; Nathan J Kuwada; Alistair B Russell; Delia Pinto-Santini; Rachel D Hood; Danielle M Agnello; Stephen M Robertson; Paul A Wiggins; Joseph D Mougous
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

Review 5.  Multifaceted Interfaces of Bacterial Competition.

Authors:  Reed M Stubbendieck; Paul D Straight
Journal:  J Bacteriol       Date:  2016-07-28       Impact factor: 3.490

Review 6.  A view to a kill: the bacterial type VI secretion system.

Authors:  Brian T Ho; Tao G Dong; John J Mekalanos
Journal:  Cell Host Microbe       Date:  2013-12-11       Impact factor: 21.023

Review 7.  Type VI secretion system effectors: poisons with a purpose.

Authors:  Alistair B Russell; S Brook Peterson; Joseph D Mougous
Journal:  Nat Rev Microbiol       Date:  2014-01-02       Impact factor: 60.633

8.  Genetically distinct pathways guide effector export through the type VI secretion system.

Authors:  John C Whitney; Christina M Beck; Young Ah Goo; Alistair B Russell; Brittany N Harding; Justin A De Leon; David A Cunningham; Bao Q Tran; David A Low; David R Goodlett; Christopher S Hayes; Joseph D Mougous
Journal:  Mol Microbiol       Date:  2014-03-28       Impact factor: 3.501

9.  Promoter swapping unveils the role of the Citrobacter rodentium CTS1 type VI secretion system in interbacterial competition.

Authors:  Erwan Gueguen; Eric Cascales
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

10.  Structure of the type VI effector-immunity complex (Tae4-Tai4) provides novel insights into the inhibition mechanism of the effector by its immunity protein.

Authors:  Heng Zhang; Heng Zhang; Zeng-Qiang Gao; Wen-Jia Wang; Guang-Feng Liu; Jian-Hua Xu; Xiao-Dong Su; Yu-Hui Dong
Journal:  J Biol Chem       Date:  2013-01-03       Impact factor: 5.157

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