Literature DB >> 22809411

To jump or not to jump? Cα hydrogen atom transfer in post-cleavage radical-cation complexes.

Benjamin J Bythell1.   

Abstract

Conventionally, electron capture or transfer to a polyprotonated peptide ion produces an initial radical-cation intermediate which dissociates "directly" to generate complementary c(n)' and z(m)(•) sequence ions (or ions and neutrals). Alternatively, or in addition, the initial radical-cation intermediate can undergo H(•) migration to produce c(n)(•) (or c(n) - H(•)) and z(m)' (or z(m)(•) + H(•)) species prior to complex separation ("nondirect"). This reaction significantly complicates spectral interpretation, creates ambiguity in peak assignment, impairs effective algorithmic processing (reduction of the spectrum to solely (12)C m/z values), and reduces sequence ion signal-to-noise. Experimental evidence indicates that the products of hydrogen atom transfer reactions are substantially less prevalent for higher charge state precursors. This effect is generally rationalized on the basis of decreased complex lifetime. Here, we present a theoretical study of these reactions in post N-C(α) bond cleavage radical-cation complexes as a function of size and precursor charge state. This approach provides a computational estimate of the barriers associated with these processes for highly charged peptides with little charge solvation. The data indicate that the H(•) migration is an exothermic process and that the barrier governing this reaction rises steeply with precursor ion charge state. There is also some evidence for immediate product separation following N-C(α) bond cleavage at higher charge state.

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Year:  2012        PMID: 22809411     DOI: 10.1021/jp305277v

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

1.  Photoleucine Survives Backbone Cleavage by Electron Transfer Dissociation. A Near-UV Photodissociation and Infrared Multiphoton Dissociation Action Spectroscopy Study.

Authors:  Christopher J Shaffer; Jonathan Martens; Aleš Marek; Jos Oomens; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2016-04-08       Impact factor: 3.109

2.  Influence of metal-peptide complexation on fragmentation and inter-fragment hydrogen migration in electron transfer dissociation.

Authors:  Daiki Asakawa; Takae Takeuchi; Asuka Yamashita; Yoshinao Wada
Journal:  J Am Soc Mass Spectrom       Date:  2014-03-27       Impact factor: 3.109

3.  Spontaneous Isomerization of Peptide Cation Radicals Following Electron Transfer Dissociation Revealed by UV-Vis Photodissociation Action Spectroscopy.

Authors:  Naruaki Imaoka; Camille Houferak; Megan P Murphy; Huong T H Nguyen; Andy Dang; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2018-01-16       Impact factor: 3.109

4.  Effective discrimination of gas-phase peptide conformers using TIMS-ECD-ToF MS/MS.

Authors:  K Jeanne Dit Fouque; M Wellmann; D Leyva Bombuse; M Santos-Fernandez; Y L Cintron-Diaz; M E Gomez-Hernandez; D Kaplan; V G Voinov; F Fernandez-Lima
Journal:  Anal Methods       Date:  2021-11-11       Impact factor: 2.896

  4 in total

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