Literature DB >> 22807827

4-[(2-Bromo-benzyl-idene)amino]-3-(pyridin-4-yl)-1H-1,2,4-triazole-5(4H)-thione.

Wei Gao1, Xian Li, Xin-Ling Wang, Jing Yang, Xue-Fen Wu.   

Abstract

In the title compound, C(14)H(10)BrN(5)S, the dihedral angle between the triazole ring and the pyridine and bromo-benzene rings are 26.42 (13) and 6.28 (13)°, respectively. The molecule exists as a thione in the solid state. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds, generating [010] C(8) chains.

Entities:  

Year:  2012        PMID: 22807827      PMCID: PMC3393270          DOI: 10.1107/S1600536812024439

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Zou et al. (2008 ▶); Kashaev et al. (2010 ▶); Liu & Liu (2011 ▶); Liu, Pan, Weng, Tan et al. (2012 ▶); Liu, Tan, Weng & Liu (2012 ▶); Tan et al. (2012 ▶).

Experimental

Crystal data

C14H10BrN5S M = 360.24 Monoclinic, a = 10.406 (3) Å b = 17.299 (5) Å c = 15.858 (4) Å β = 103.719 (5)° V = 2773.3 (13) Å3 Z = 8 Mo Kα radiation μ = 3.12 mm−1 T = 113 K 0.20 × 0.18 × 0.12 mm

Data collection

Rigaku Saturn CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.575, T max = 0.706 14119 measured reflections 3293 independent reflections 2565 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.087 S = 1.08 3293 reflections 194 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812024439/hb6820sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812024439/hb6820Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812024439/hb6820Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10BrN5SF(000) = 1440
Mr = 360.24Dx = 1.726 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 10.406 (3) ÅCell parameters from 5149 reflections
b = 17.299 (5) Åθ = 2.3–27.9°
c = 15.858 (4) ŵ = 3.12 mm1
β = 103.719 (5)°T = 113 K
V = 2773.3 (13) Å3Prism, colorless
Z = 80.20 × 0.18 × 0.12 mm
Rigaku Saturn CCD diffractometer3293 independent reflections
Radiation source: rotating anode2565 reflections with I > 2σ(I)
Multilayer monochromatorRint = 0.036
Detector resolution: 14.63 pixels mm-1θmax = 27.9°, θmin = 2.3°
ω and φ scansh = −13→13
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −22→22
Tmin = 0.575, Tmax = 0.706l = −20→20
14119 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0476P)2 + 0.9724P] where P = (Fo2 + 2Fc2)/3
3293 reflections(Δ/σ)max = 0.003
194 parametersΔρmax = 0.54 e Å3
1 restraintΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.42237 (3)1.115195 (15)1.078191 (18)0.02495 (10)
S10.04950 (6)1.18904 (3)0.90838 (4)0.01831 (15)
N1−0.2275 (2)0.76260 (12)0.76957 (13)0.0170 (4)
N2−0.1987 (2)1.05219 (11)0.75708 (13)0.0135 (4)
N3−0.1441 (2)1.12183 (11)0.78721 (13)0.0135 (4)
N4−0.02113 (18)1.03665 (11)0.86394 (12)0.0110 (4)
N50.0722 (2)0.99264 (12)0.92068 (13)0.0165 (4)
C1−0.1154 (3)0.86370 (13)0.86163 (16)0.0157 (5)
H1−0.06380.87870.91700.019*
C2−0.1571 (3)0.78812 (14)0.84586 (17)0.0185 (5)
H2−0.13410.75210.89230.022*
C3−0.2600 (2)0.81462 (13)0.70517 (17)0.0178 (5)
H3A−0.30980.79750.65020.021*
C4−0.2249 (2)0.89158 (13)0.71470 (16)0.0149 (5)
H4−0.25110.92630.66730.018*
C5−0.1507 (2)0.91779 (13)0.79426 (16)0.0123 (5)
C6−0.1234 (2)1.00094 (13)0.80478 (15)0.0111 (4)
C7−0.0371 (2)1.11627 (13)0.85297 (15)0.0125 (5)
C80.1806 (2)1.02341 (14)0.96104 (16)0.0177 (5)
H80.19781.07650.95330.021*
C90.2775 (2)0.97532 (14)1.01938 (15)0.0158 (5)
C100.2607 (3)0.89478 (14)1.02189 (18)0.0203 (5)
H100.18570.87140.98460.024*
C110.3519 (3)0.84900 (15)1.07796 (18)0.0234 (6)
H110.33960.79461.07860.028*
C120.4613 (3)0.88260 (16)1.13319 (19)0.0257 (6)
H120.52300.85111.17210.031*
C130.4808 (3)0.96139 (16)1.13185 (17)0.0234 (6)
H130.55590.98431.16940.028*
C140.3892 (2)1.00692 (14)1.07490 (16)0.0175 (5)
H3−0.175 (3)1.1661 (12)0.761 (2)0.049 (10)*
U11U22U33U12U13U23
Br10.01786 (15)0.02020 (14)0.03306 (18)−0.00296 (10)−0.00141 (11)−0.00368 (11)
S10.0216 (3)0.0097 (3)0.0195 (3)−0.0023 (2)−0.0033 (3)−0.0012 (2)
N10.0181 (11)0.0111 (9)0.0198 (12)−0.0002 (8)0.0006 (9)−0.0007 (8)
N20.0148 (10)0.0094 (9)0.0149 (10)−0.0007 (7)0.0005 (8)−0.0008 (8)
N30.0163 (10)0.0082 (9)0.0140 (11)0.0002 (8)−0.0005 (9)0.0015 (8)
N40.0113 (9)0.0078 (9)0.0124 (10)0.0010 (7)−0.0001 (8)0.0001 (8)
N50.0159 (10)0.0134 (10)0.0185 (11)0.0026 (8)0.0007 (9)0.0012 (8)
C10.0190 (12)0.0125 (10)0.0135 (12)−0.0014 (9)−0.0003 (10)0.0000 (9)
C20.0223 (13)0.0137 (11)0.0173 (13)0.0006 (10)0.0001 (11)0.0031 (10)
C30.0193 (12)0.0131 (11)0.0187 (13)−0.0028 (9)0.0001 (10)−0.0030 (10)
C40.0161 (12)0.0144 (11)0.0129 (12)0.0004 (9)0.0007 (10)0.0025 (9)
C50.0095 (11)0.0098 (10)0.0168 (13)0.0002 (8)0.0017 (10)−0.0006 (9)
C60.0108 (11)0.0115 (10)0.0106 (11)−0.0002 (8)0.0016 (9)−0.0008 (9)
C70.0140 (11)0.0098 (10)0.0139 (12)0.0003 (9)0.0038 (10)0.0015 (9)
C80.0162 (12)0.0149 (11)0.0206 (13)0.0005 (9)0.0017 (11)−0.0011 (10)
C90.0143 (11)0.0170 (11)0.0159 (13)0.0004 (9)0.0032 (10)0.0005 (10)
C100.0167 (12)0.0197 (13)0.0237 (15)−0.0002 (10)0.0032 (11)−0.0007 (10)
C110.0266 (14)0.0180 (13)0.0257 (15)0.0048 (11)0.0064 (12)0.0062 (11)
C120.0244 (14)0.0285 (14)0.0222 (15)0.0100 (12)0.0013 (12)0.0065 (12)
C130.0157 (13)0.0313 (15)0.0207 (14)0.0040 (11)−0.0005 (11)0.0001 (12)
C140.0169 (12)0.0175 (12)0.0183 (13)0.0019 (10)0.0043 (11)−0.0003 (10)
Br1—C141.903 (3)C3—H3A0.9500
S1—C71.671 (2)C4—C51.390 (3)
N1—C21.332 (3)C4—H40.9500
N1—C31.343 (3)C5—C61.468 (3)
N2—C61.300 (3)C8—C91.457 (3)
N2—N31.369 (3)C8—H80.9500
N3—C71.336 (3)C9—C141.393 (3)
N3—H30.896 (10)C9—C101.406 (3)
N4—N51.385 (3)C10—C111.385 (4)
N4—C61.386 (3)C10—H100.9500
N4—C71.393 (3)C11—C121.389 (4)
N5—C81.274 (3)C11—H110.9500
C1—C21.382 (3)C12—C131.379 (4)
C1—C51.402 (3)C12—H120.9500
C1—H10.9500C13—C141.391 (3)
C2—H20.9500C13—H130.9500
C3—C41.380 (3)
C2—N1—C3117.0 (2)N4—C6—C5127.6 (2)
C6—N2—N3104.72 (19)N3—C7—N4102.8 (2)
C7—N3—N2114.15 (19)N3—C7—S1127.00 (17)
C7—N3—H3125 (2)N4—C7—S1130.19 (19)
N2—N3—H3121 (2)N5—C8—C9118.5 (2)
N5—N4—C6120.17 (18)N5—C8—H8120.7
N5—N4—C7132.0 (2)C9—C8—H8120.7
C6—N4—C7107.83 (19)C14—C9—C10117.5 (2)
C8—N5—N4119.8 (2)C14—C9—C8121.7 (2)
C2—C1—C5118.6 (2)C10—C9—C8120.8 (2)
C2—C1—H1120.7C11—C10—C9120.9 (3)
C5—C1—H1120.7C11—C10—H10119.5
N1—C2—C1124.0 (2)C9—C10—H10119.5
N1—C2—H2118.0C10—C11—C12120.0 (3)
C1—C2—H2118.0C10—C11—H11120.0
N1—C3—C4123.4 (2)C12—C11—H11120.0
N1—C3—H3A118.3C13—C12—C11120.4 (3)
C4—C3—H3A118.3C13—C12—H12119.8
C3—C4—C5119.4 (2)C11—C12—H12119.8
C3—C4—H4120.3C12—C13—C14119.3 (3)
C5—C4—H4120.3C12—C13—H13120.4
C4—C5—C1117.6 (2)C14—C13—H13120.4
C4—C5—C6118.3 (2)C13—C14—C9121.9 (2)
C1—C5—C6124.0 (2)C13—C14—Br1116.6 (2)
N2—C6—N4110.48 (19)C9—C14—Br1121.48 (19)
N2—C6—C5121.9 (2)
C6—N2—N3—C7−0.5 (3)N2—N3—C7—N41.4 (3)
C6—N4—N5—C8164.5 (2)N2—N3—C7—S1−176.78 (17)
C7—N4—N5—C8−16.5 (3)N5—N4—C7—N3179.1 (2)
C3—N1—C2—C1−0.7 (4)C6—N4—C7—N3−1.7 (2)
C5—C1—C2—N11.2 (4)N5—N4—C7—S1−2.8 (4)
C2—N1—C3—C4−0.3 (4)C6—N4—C7—S1176.36 (18)
N1—C3—C4—C50.7 (4)N4—N5—C8—C9−179.17 (19)
C3—C4—C5—C1−0.1 (3)N5—C8—C9—C14−170.6 (2)
C3—C4—C5—C6−175.3 (2)N5—C8—C9—C109.0 (4)
C2—C1—C5—C4−0.8 (3)C14—C9—C10—C110.3 (4)
C2—C1—C5—C6174.1 (2)C8—C9—C10—C11−179.3 (2)
N3—N2—C6—N4−0.7 (2)C9—C10—C11—C120.5 (4)
N3—N2—C6—C5178.5 (2)C10—C11—C12—C13−0.8 (4)
N5—N4—C6—N2−179.16 (18)C11—C12—C13—C140.4 (4)
C7—N4—C6—N21.6 (3)C12—C13—C14—C90.4 (4)
N5—N4—C6—C51.7 (3)C12—C13—C14—Br1179.2 (2)
C7—N4—C6—C5−177.5 (2)C10—C9—C14—C13−0.8 (4)
C4—C5—C6—N223.8 (3)C8—C9—C14—C13178.8 (2)
C1—C5—C6—N2−151.0 (2)C10—C9—C14—Br1−179.52 (18)
C4—C5—C6—N4−157.1 (2)C8—C9—C14—Br10.1 (3)
C1—C5—C6—N428.0 (4)
D—H···AD—HH···AD···AD—H···A
N3—H3···N1i0.90 (1)1.95 (1)2.821 (3)163 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3⋯N1i 0.90 (1)1.95 (1)2.821 (3)163 (3)

Symmetry code: (i) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, structure, and biological activity of novel (oxdi/tri)azoles derivatives containing 1,2,3-thiadiazole or methyl moiety.

Authors:  Xing-Hai Liu; Li Pan; Jian-Quan Weng; Cheng-Xia Tan; Yong-Hong Li; Bao-Lei Wang; Zheng-Ming Li
Journal:  Mol Divers       Date:  2012-01-17       Impact factor: 2.943

3.  4-Amino-3-(4-pyrid-yl)-1,2,4-triazole-5(4H)-thione.

Authors:  Fang Zou; Wei-Min Xuan; Xue-Ming Fang; Hui Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06

4.  4-Allyl-3-(2-methyl-4-quinol-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Artyom G Kashaev; Anatoliy V Zimichev; Victor B Rybakov; Yurij N Klimochkin; Margarita N Zemtsova
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-06

5.  5-(4-Pyrid-yl)-1,3,4-thia-diazole-2(3H)-thione.

Authors:  Xu-Feng Liu; Xing-Hai Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18

6.  (E)-(4-Bromo-benzyl-idene)amino cyclo-propane-carboxyl-ate.

Authors:  Xing-Hai Liu; Cheng-Xia Tan; Jian-Quan Weng; Hui-Jun Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-21
  6 in total

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