Literature DB >> 21200779

4-Amino-3-(4-pyrid-yl)-1,2,4-triazole-5(4H)-thione.

Fang Zou1, Wei-Min Xuan, Xue-Ming Fang, Hui Zhang.   

Abstract

In the title mol-ecule, C(7)H(7)N(5)S, the pyridyl and triazole rings form a dihedral angle of 20.07 (6)°. Inter-molecular N-H⋯N hydrogen bonds link the mol-ecules into chains extended in the direction [10]. Further stability is provided by π⋯π stacking inter-actions, indicated by short distances between the centroids of triazole rings [3.480 (5) Å] and pyridyl rings [3.574 (5) Å] of neighbouring mol-ecules.

Entities:  

Year:  2007        PMID: 21200779      PMCID: PMC2915274          DOI: 10.1107/S1600536807064331

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activities of related compounds, see: Eweiss et al. (1986 ▶); Awad et al. (1991 ▶). For a similar structure, see Kajdan et al. (2000 ▶).

Experimental

Crystal data

C7H7N5S M = 193.24 Monoclinic, a = 7.722 (6) Å b = 14.215 (11) Å c = 15.068 (12) Å β = 93.432 (15)° V = 1651 (2) Å3 Z = 8 Mo Kα radiation μ = 0.35 mm−1 T = 273 (2) K 0.15 × 0.10 × 0.08 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.950, T max = 0.973 4402 measured reflections 1626 independent reflections 1116 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.169 S = 1.01 1626 reflections 118 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.28 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and ViewerPro (Accelrys, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807064331/cv2366sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807064331/cv2366Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H7N5SF000 = 800
Mr = 193.24Dx = 1.555 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
a = 7.722 (6) ÅCell parameters from 1061 reflections
b = 14.215 (11) Åθ = 2.7–23.8º
c = 15.068 (12) ŵ = 0.35 mm1
β = 93.432 (15)ºT = 273 (2) K
V = 1651 (2) Å3Clubbed, colourless
Z = 80.15 × 0.10 × 0.08 mm
Bruker APEX area-detector diffractometer1626 independent reflections
Radiation source: fine-focus sealed tube1116 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.060
T = 273(2) Kθmax = 26.0º
φ and ω scanθmin = 2.7º
Absorption correction: multi-scan(SADABS; Bruker, 2001)h = −9→9
Tmin = 0.950, Tmax = 0.973k = −16→17
4402 measured reflectionsl = −8→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.065H-atom parameters constrained
wR(F2) = 0.169  w = 1/[σ2(Fo2) + (0.0857P)2 + 0.3739P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.048
1626 reflectionsΔρmax = 0.29 e Å3
118 parametersΔρmin = −0.28 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.11589 (13)0.51429 (7)0.38748 (7)0.0572 (4)
N50.2341 (3)0.73058 (19)0.24951 (19)0.0425 (8)
C60.2889 (4)0.6629 (2)0.2010 (2)0.0362 (8)
N30.2571 (3)0.57925 (19)0.2400 (2)0.0414 (7)
C30.3732 (4)0.6799 (2)0.1189 (2)0.0366 (8)
N10.5323 (3)0.7249 (2)−0.0353 (2)0.0468 (8)
N40.1676 (3)0.68743 (19)0.31970 (19)0.0401 (7)
H4B0.12290.71720.36240.048*
C70.1781 (4)0.5945 (2)0.3160 (2)0.0409 (9)
C10.5178 (5)0.7863 (3)0.0293 (3)0.0551 (11)
H1A0.56300.84620.02190.066*
N20.2980 (4)0.49002 (19)0.2082 (2)0.0579 (10)
H2B0.26420.44580.24630.087*
H2C0.24070.48200.15500.087*
C40.3874 (5)0.6154 (3)0.0534 (3)0.0564 (11)
H4A0.34380.55500.05960.068*
C50.4670 (5)0.6408 (3)−0.0219 (3)0.0591 (11)
H5A0.47530.5959−0.06630.071*
C20.4414 (4)0.7675 (3)0.1055 (2)0.0493 (10)
H2A0.43500.81380.14880.059*
U11U22U33U12U13U23
S10.0686 (7)0.0505 (6)0.0540 (7)0.0022 (5)0.0170 (6)0.0140 (5)
N50.0460 (16)0.0430 (16)0.0394 (18)−0.0043 (12)0.0104 (15)−0.0002 (13)
C60.0297 (16)0.0445 (19)0.034 (2)−0.0018 (13)0.0000 (15)0.0030 (16)
N30.0415 (15)0.0405 (16)0.0433 (18)0.0031 (11)0.0118 (14)0.0008 (13)
C30.0259 (15)0.0485 (19)0.035 (2)0.0043 (13)0.0030 (15)0.0050 (16)
N10.0402 (15)0.062 (2)0.0383 (19)0.0031 (14)0.0070 (14)0.0012 (16)
N40.0420 (15)0.0470 (17)0.0324 (17)−0.0008 (12)0.0111 (14)0.0011 (13)
C70.0330 (16)0.043 (2)0.047 (2)0.0027 (14)0.0053 (17)0.0025 (16)
C10.064 (2)0.048 (2)0.055 (3)−0.0077 (17)0.018 (2)0.002 (2)
N20.076 (2)0.0413 (17)0.060 (2)0.0057 (15)0.0273 (19)−0.0025 (16)
C40.070 (2)0.047 (2)0.053 (3)−0.0123 (18)0.018 (2)−0.005 (2)
C50.077 (3)0.059 (3)0.043 (2)−0.002 (2)0.021 (2)−0.0063 (19)
C20.061 (2)0.046 (2)0.042 (2)0.0017 (17)0.0151 (19)−0.0012 (17)
S1—C71.659 (4)N4—C71.325 (4)
N5—C61.295 (4)N4—H4B0.8600
N5—N41.350 (4)C1—C21.349 (5)
C6—N31.356 (4)C1—H1A0.9300
C6—C31.452 (4)N2—H2B0.9000
N3—C71.347 (4)N2—H2C0.8999
N3—N21.399 (4)C4—C51.371 (5)
C3—C41.355 (5)C4—H4A0.9300
C3—C21.372 (5)C5—H5A0.9300
N1—C51.319 (5)C2—H2A0.9300
N1—C11.317 (5)
C6—N5—N4104.9 (3)N3—C7—S1127.2 (3)
N5—C6—N3109.5 (3)N1—C1—C2124.0 (3)
N5—C6—C3122.4 (3)N1—C1—H1A118.0
N3—C6—C3128.1 (3)C2—C1—H1A118.0
C7—N3—C6109.3 (3)N3—N2—H2B109.6
C7—N3—N2124.1 (3)N3—N2—H2C108.1
C6—N3—N2126.6 (3)H2B—N2—H2C109.5
C4—C3—C2117.3 (3)C3—C4—C5119.0 (4)
C4—C3—C6124.6 (3)C3—C4—H4A120.5
C2—C3—C6118.1 (3)C5—C4—H4A120.5
C5—N1—C1115.9 (3)N1—C5—C4124.1 (4)
C7—N4—N5113.1 (3)N1—C5—H5A118.0
C7—N4—H4B123.4C4—C5—H5A118.0
N5—N4—H4B123.4C1—C2—C3119.7 (3)
N4—C7—N3103.2 (3)C1—C2—H2A120.1
N4—C7—S1129.6 (3)C3—C2—H2A120.1
D—H···AD—HH···AD···AD—H···A
N4—H4B···N1i0.861.912.772 (4)175
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4B⋯N1i0.861.912.772 (4)175

Symmetry code: (i) .

  1 in total

1.  4-[(2-Bromo-benzyl-idene)amino]-3-(pyridin-4-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Wei Gao; Xian Li; Xin-Ling Wang; Jing Yang; Xue-Fen Wu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-02
  1 in total

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