| Literature DB >> 22807822 |
Abstract
The asymmetric unit of the title compound, C(5)H(5)NO·C(8)H(6)O(4), contains one o-phthalate acid mol-ecule and one pyridin-2-ol mol-ecule, which exists in a zwitterionic form. In the o-phthalate acid mol-ecule, the carboxyl-ate groups are twisted from the benzene ring by dihedral angles of 13.6 (1)° and 73.1 (1)°; the hy-droxy H atom in the latter group is disordered over two positons in a 1:1 ratio. In the crystal, O-H⋯O and N-H⋯O hydrogen bonds link the mol-ecules into zigzag chains in [-101].Entities:
Year: 2012 PMID: 22807822 PMCID: PMC3393265 DOI: 10.1107/S1600536812023914
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H5NO·C8H6O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2864 reflections | |
| θ = 3.2–27.5° | |
| µ = 0.11 mm−1 | |
| α = 84.42 (3)° | |
| β = 84.29 (3)° | Block, colourless |
| γ = 70.30 (3)° | 0.34 × 0.30 × 0.28 mm |
| Rigaku, SCXmini diffractometer | 1687 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 27.5°, θmin = 3.2° |
| ω scans | |
| Absorption correction: multi-scan | |
| 6555 measured reflections | 3 standard reflections every 180 reflections |
| 2864 independent reflections | intensity decay: none |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2864 reflections | (Δ/σ)max < 0.001 |
| 184 parameters | Δρmax = 0.20 e Å−3 |
| 6 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| C1 | 0.3559 (3) | 0.3156 (3) | 0.68465 (17) | 0.0443 (5) | |
| C2 | 0.5446 (3) | 0.2808 (3) | 0.6408 (2) | 0.0567 (6) | |
| H2 | 0.5713 | 0.3150 | 0.5629 | 0.068* | |
| C3 | 0.6907 (3) | 0.1969 (3) | 0.7113 (2) | 0.0662 (7) | |
| H3 | 0.8165 | 0.1738 | 0.6811 | 0.079* | |
| C4 | 0.6532 (3) | 0.1465 (3) | 0.8262 (2) | 0.0633 (6) | |
| H4 | 0.7537 | 0.0872 | 0.8732 | 0.076* | |
| C5 | 0.4692 (3) | 0.1827 (3) | 0.87225 (18) | 0.0532 (6) | |
| H5 | 0.4452 | 0.1500 | 0.9508 | 0.064* | |
| C6 | 0.3168 (3) | 0.2685 (3) | 0.80241 (17) | 0.0433 (5) | |
| C7 | 0.1172 (3) | 0.3228 (3) | 0.85256 (18) | 0.0508 (5) | |
| C8 | 0.2024 (3) | 0.3968 (3) | 0.60303 (16) | 0.0456 (5) | |
| C9 | 0.3260 (3) | 0.6814 (3) | 0.87731 (18) | 0.0491 (5) | |
| C10 | 0.2091 (3) | 0.8029 (3) | 0.7956 (2) | 0.0623 (6) | |
| H10 | 0.0770 | 0.8389 | 0.8093 | 0.075* | |
| C11 | 0.2866 (4) | 0.8680 (3) | 0.6973 (2) | 0.0665 (7) | |
| H11 | 0.2069 | 0.9480 | 0.6440 | 0.080* | |
| C12 | 0.4816 (4) | 0.8177 (3) | 0.6746 (2) | 0.0632 (6) | |
| H12 | 0.5342 | 0.8633 | 0.6068 | 0.076* | |
| C13 | 0.5943 (3) | 0.7015 (3) | 0.7522 (2) | 0.0611 (6) | |
| H13 | 0.7264 | 0.6659 | 0.7385 | 0.073* | |
| H3A | 0.063 (5) | 0.612 (8) | 0.532 (5) | 0.11 (2)* | 0.50 |
| H3A' | 0.038 (5) | 0.352 (5) | 0.521 (3) | 0.11 (2)* | 0.50 |
| H1B | −0.026 (3) | 0.294 (4) | 0.983 (2) | 0.092 (10)* | |
| N1 | 0.5161 (3) | 0.6359 (2) | 0.85064 (15) | 0.0547 (5) | |
| H1A | 0.5917 | 0.5613 | 0.8987 | 0.066* | |
| O1 | 0.0910 (3) | 0.2509 (2) | 0.95711 (14) | 0.0729 (5) | |
| O2 | −0.0108 (2) | 0.4285 (3) | 0.79990 (16) | 0.0876 (6) | |
| O3 | 0.1680 (3) | 0.5598 (2) | 0.56473 (16) | 0.0723 (5) | |
| O4 | 0.1233 (3) | 0.2930 (2) | 0.56793 (15) | 0.0696 (5) | |
| O5 | 0.2656 (2) | 0.6139 (2) | 0.97148 (13) | 0.0663 (5) |
| C1 | 0.0418 (11) | 0.0481 (11) | 0.0449 (11) | −0.0178 (9) | −0.0053 (9) | 0.0001 (9) |
| C2 | 0.0510 (13) | 0.0692 (15) | 0.0519 (12) | −0.0261 (11) | 0.0056 (11) | −0.0011 (11) |
| C3 | 0.0394 (12) | 0.0793 (17) | 0.0794 (17) | −0.0192 (12) | −0.0011 (12) | −0.0083 (13) |
| C4 | 0.0457 (14) | 0.0684 (15) | 0.0716 (16) | −0.0089 (11) | −0.0185 (12) | −0.0064 (12) |
| C5 | 0.0539 (13) | 0.0566 (13) | 0.0462 (12) | −0.0129 (10) | −0.0119 (10) | −0.0016 (10) |
| C6 | 0.0418 (11) | 0.0464 (11) | 0.0414 (11) | −0.0142 (9) | −0.0052 (9) | 0.0000 (8) |
| C7 | 0.0486 (13) | 0.0613 (13) | 0.0412 (11) | −0.0177 (11) | −0.0029 (10) | 0.0010 (10) |
| C8 | 0.0490 (12) | 0.0524 (13) | 0.0377 (10) | −0.0221 (10) | −0.0026 (9) | 0.0045 (9) |
| C9 | 0.0498 (12) | 0.0537 (12) | 0.0409 (11) | −0.0147 (10) | 0.0057 (9) | −0.0065 (9) |
| C10 | 0.0552 (14) | 0.0587 (14) | 0.0626 (14) | −0.0072 (11) | −0.0008 (11) | −0.0015 (11) |
| C11 | 0.0803 (18) | 0.0523 (14) | 0.0582 (15) | −0.0121 (12) | −0.0107 (13) | 0.0073 (11) |
| C12 | 0.0769 (17) | 0.0550 (13) | 0.0524 (13) | −0.0210 (12) | 0.0078 (12) | 0.0058 (11) |
| C13 | 0.0585 (14) | 0.0608 (14) | 0.0580 (14) | −0.0169 (11) | 0.0108 (11) | 0.0000 (11) |
| N1 | 0.0523 (11) | 0.0583 (11) | 0.0472 (10) | −0.0121 (9) | −0.0012 (9) | 0.0028 (8) |
| O1 | 0.0565 (11) | 0.0911 (13) | 0.0538 (10) | −0.0116 (9) | 0.0091 (8) | 0.0177 (9) |
| O2 | 0.0456 (10) | 0.1286 (16) | 0.0627 (11) | −0.0037 (10) | −0.0012 (8) | 0.0241 (10) |
| O3 | 0.0820 (13) | 0.0609 (11) | 0.0843 (12) | −0.0359 (9) | −0.0379 (10) | 0.0231 (9) |
| O4 | 0.0824 (12) | 0.0601 (10) | 0.0769 (12) | −0.0331 (9) | −0.0393 (10) | 0.0142 (9) |
| O5 | 0.0584 (10) | 0.0838 (11) | 0.0494 (9) | −0.0192 (8) | 0.0075 (8) | 0.0033 (8) |
| C1—C2 | 1.391 (3) | C9—O5 | 1.266 (2) |
| C1—C6 | 1.396 (3) | C9—N1 | 1.351 (3) |
| C1—C8 | 1.483 (3) | C9—C10 | 1.404 (3) |
| C2—C3 | 1.365 (3) | C10—C11 | 1.350 (3) |
| C2—H2 | 0.9300 | C10—H10 | 0.9300 |
| C3—C4 | 1.370 (4) | C11—C12 | 1.377 (3) |
| C3—H3 | 0.9300 | C11—H11 | 0.9300 |
| C4—C5 | 1.365 (3) | C12—C13 | 1.342 (3) |
| C4—H4 | 0.9300 | C12—H12 | 0.9300 |
| C5—C6 | 1.395 (3) | C13—N1 | 1.355 (3) |
| C5—H5 | 0.9300 | C13—H13 | 0.9300 |
| C6—C7 | 1.475 (3) | N1—H1A | 0.8600 |
| C7—O2 | 1.201 (3) | O1—H1B | 0.85 (2) |
| C7—O1 | 1.300 (2) | O3—H3A | 0.855 (15) |
| C8—O3 | 1.252 (2) | O4—H3A' | 0.85 (3) |
| C8—O4 | 1.263 (2) | ||
| C2—C1—C6 | 119.45 (19) | O4—C8—C1 | 117.90 (18) |
| C2—C1—C8 | 118.47 (18) | O5—C9—N1 | 119.3 (2) |
| C6—C1—C8 | 122.05 (17) | O5—C9—C10 | 124.9 (2) |
| C3—C2—C1 | 120.4 (2) | N1—C9—C10 | 115.89 (19) |
| C3—C2—H2 | 119.8 | C11—C10—C9 | 120.7 (2) |
| C1—C2—H2 | 119.8 | C11—C10—H10 | 119.7 |
| C2—C3—C4 | 120.4 (2) | C9—C10—H10 | 119.7 |
| C2—C3—H3 | 119.8 | C10—C11—C12 | 121.1 (2) |
| C4—C3—H3 | 119.8 | C10—C11—H11 | 119.5 |
| C5—C4—C3 | 120.4 (2) | C12—C11—H11 | 119.5 |
| C5—C4—H4 | 119.8 | C13—C12—C11 | 118.6 (2) |
| C3—C4—H4 | 119.8 | C13—C12—H12 | 120.7 |
| C4—C5—C6 | 120.5 (2) | C11—C12—H12 | 120.7 |
| C4—C5—H5 | 119.7 | C12—C13—N1 | 120.2 (2) |
| C6—C5—H5 | 119.7 | C12—C13—H13 | 119.9 |
| C5—C6—C1 | 118.79 (19) | N1—C13—H13 | 119.9 |
| C5—C6—C7 | 121.36 (18) | C9—N1—C13 | 123.6 (2) |
| C1—C6—C7 | 119.67 (18) | C9—N1—H1A | 118.2 |
| O2—C7—O1 | 122.9 (2) | C13—N1—H1A | 118.2 |
| O2—C7—C6 | 121.49 (18) | C7—O1—H1B | 110 (2) |
| O1—C7—C6 | 115.58 (19) | C8—O3—H3A | 117 (4) |
| O3—C8—O4 | 122.96 (19) | C8—O4—H3A' | 111 (3) |
| O3—C8—C1 | 118.87 (18) |
| H··· | ||||
| O3—H3 | 0.86 (2) | 1.80 (2) | 2.644 (3) | 167 (7) |
| O4—H3 | 0.85 (3) | 1.81 (3) | 2.644 (3) | 167 (4) |
| O1—H1 | 0.85 (2) | 1.74 (2) | 2.587 (2) | 178 (3) |
| N1—H1 | 0.86 | 2.04 | 2.892 (3) | 171 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H3 | 0.86 (2) | 1.80 (2) | 2.644 (3) | 167 (7) |
| O4—H3 | 0.85 (3) | 1.81 (3) | 2.644 (3) | 167 (4) |
| O1—H1 | 0.85 (2) | 1.74 (2) | 2.587 (2) | 178 (3) |
| N1—H1 | 0.86 | 2.04 | 2.892 (3) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) .